FFCP PHASE1:Hg19::chr19:17488143..17488161,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83483|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13635|TSSclassifier=S|UniProt=Q9BX97|association_with_transcript=0bp_to_ENST00000252590_5end|description=CAGE_peak_1_at_PLVAP_5end|id=chr19:17488143..17488161,-|ontology_enrichment_celltype=CL:0000115!7.12e-13!35;CL:0002139!1.89e-12!24;CL:0000071!2.46e-09!18;CL:0002546!2.46e-09!18;CL:0002078!5.82e-09!44|ontology_enrichment_celltype_v019=CL:0000115;5.74e-13;36!CL:0002139;7.08e-13;24!CL:0000071;3.51e-09;18!CL:0002078;1.70e-07;45|ontology_enrichment_celltype_v019_2=CL:0000115,2.97e-15,36;CL:0002139,5.09e-13,24;CL:0002078,2.60e-11,45;CL:0000071,3.36e-09,18;CL:0002546,3.36e-09,18|ontology_enrichment_development_v019=CL:0002546;3.51e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.55e-61!115;UBERON:0000477!4.70e-16!286;UBERON:0004111!7.02e-16!241;UBERON:0000025!6.19e-15!194;UBERON:0002616!4.73e-14!59;UBERON:0001049!7.70e-14!57;UBERON:0005068!7.70e-14!57;UBERON:0006241!7.70e-14!57;UBERON:0007135!7.70e-14!57;UBERON:0001017!5.31e-13!82;UBERON:0003080!1.51e-12!42;UBERON:0005743!1.59e-12!86;UBERON:0002780!8.40e-12!41;UBERON:0001890!8.40e-12!41;UBERON:0006240!8.40e-12!41;UBERON:0001009!3.08e-11!113;UBERON:0000955!4.70e-11!69;UBERON:0006238!4.70e-11!69;UBERON:0000073!2.15e-10!94;UBERON:0001016!2.15e-10!94;UBERON:0004535!5.20e-10!110;UBERON:0003075!5.60e-10!86;UBERON:0007284!5.60e-10!86;UBERON:0001986!2.46e-09!18;UBERON:0004638!2.46e-09!18;UBERON:0004852!2.46e-09!18;UBERON:0003103!5.92e-09!69;UBERON:0002346!7.10e-09!90;UBERON:0001893!7.41e-09!34;UBERON:0000468!1.11e-08!659;UBERON:0002791!1.77e-08!33;UBERON:0002020!1.99e-08!34;UBERON:0003528!1.99e-08!34;UBERON:0001869!5.21e-08!32;UBERON:0001950!1.21e-07!20;UBERON:0000487!1.80e-07!22;UBERON:0002619!1.86e-07!22;UBERON:0000922!2.36e-07!612;UBERON:0000119!4.31e-07!312;UBERON:0003056!4.62e-07!61;UBERON:0000467!5.21e-07!625;UBERON:0000480!6.53e-07!626;UBERON:0000479!9.94e-07!787|ontology_enrichment_uberon_v019=UBERON:0007023;3.21e-15;114!UBERON:0004638;3.51e-09;18!UBERON:0001986;3.51e-09;18!UBERON:0004852;3.51e-09;18!UBERON:0002193;5.02e-07;42!UBERON:0002465;8.66e-07;10!UBERON:0000487;8.84e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-60,114;UBERON:0004111,2.70e-13,240;UBERON:0000025,1.25e-10,192;UBERON:0001009,2.08e-10,112;UBERON:0003103,1.85e-09,68;UBERON:0004638,3.36e-09,18;UBERON:0001986,3.36e-09,18;UBERON:0004852,3.36e-09,18;UBERON:0004535,4.63e-09,109;UBERON:0003887,2.89e-08,12;UBERON:0001049,3.60e-08,56;UBERON:0005068,3.60e-08,56;UBERON:0006241,3.60e-08,56;UBERON:0007135,3.60e-08,56;UBERON:0002780,2.05e-07,41;UBERON:0001890,2.05e-07,41;UBERON:0003080,2.05e-07,41;UBERON:0006240,2.05e-07,41;UBERON:0001017,3.41e-07,81;UBERON:0004876,4.62e-07,11;UBERON:0000080,5.23e-07,9;UBERON:0002120,5.23e-07,9;UBERON:0004875,5.23e-07,9;UBERON:0005721,5.23e-07,9;UBERON:0005754,5.23e-07,9;UBERON:0007297,5.23e-07,9;UBERON:0002465,5.63e-07,10;UBERON:0000073,6.95e-07,53;UBERON:0002616,6.95e-07,53;UBERON:0000487,8.56e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0.618831764800233,3.31397375727916,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0,1.46800219667424,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0.622822248995575,0.251248665256743,0,0,10.2917915447673,0.368277635987565,0.316462387440884,1.69004229049553,4.03948169933583,2.30624510059213,0.112328631146495,0.300353785683013,0.16072558669708,1.42506371870624,2.38700012638908,0.547992461293902,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,2.01210257911091,1.15076305659177,0,0,0,0,0,0,0,0.175669571386252,34.185538704903,0,0,0,0.174129737299267,0,15.7403812041526,67.4953994720551,3.34311751196608,0.596287222100115,1.72046919021225,3.12426451446835,4.52246353539208,2.09749718104953,5.77747888074142,3.55291443112578,24.5495921210862,21.7017420238893,17.0707512509982,1.61131726843659,1.52054421143703,0.488124115096339,2.20597848207521,1.62028389576352,5.17938424047663,4.26605807989723,6.53146586803269,13.7984973719295,7.59412527654503,7.69447324507711,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,5.33744978648525,0.24666754841716,1.8672662123986,2.42479209725439,4.41347138406339,11.2004496457249,4.60940739583999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,161.656044562798,77.1329755918952,0.8231480226628,1.47008711385542,0,0.982827216677626,12.9973779469909,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,2.7429625074604,1.85194205030644,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83483 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13635 | |||
|TSSclassifier=S | |||
|UniProt=Q9BX97 | |||
|association_with_transcript=0bp_to_ENST00000252590_5end | |||
|description=CAGE_peak_1_at_PLVAP_5end | |||
|id=chr19:17488143..17488161,- | |||
|ontology_enrichment_celltype=CL:0000115!7.12e-13!35;CL:0002139!1.89e-12!24;CL:0000071!2.46e-09!18;CL:0002546!2.46e-09!18;CL:0002078!5.82e-09!44 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.74e-13;36!CL:0002139;7.08e-13;24!CL:0000071;3.51e-09;18!CL:0002078;1.70e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.97e-15,36;CL:0002139,5.09e-13,24;CL:0002078,2.60e-11,45;CL:0000071,3.36e-09,18;CL:0002546,3.36e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.51e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.55e-61!115;UBERON:0000477!4.70e-16!286;UBERON:0004111!7.02e-16!241;UBERON:0000025!6.19e-15!194;UBERON:0002616!4.73e-14!59;UBERON:0001049!7.70e-14!57;UBERON:0005068!7.70e-14!57;UBERON:0006241!7.70e-14!57;UBERON:0007135!7.70e-14!57;UBERON:0001017!5.31e-13!82;UBERON:0003080!1.51e-12!42;UBERON:0005743!1.59e-12!86;UBERON:0002780!8.40e-12!41;UBERON:0001890!8.40e-12!41;UBERON:0006240!8.40e-12!41;UBERON:0001009!3.08e-11!113;UBERON:0000955!4.70e-11!69;UBERON:0006238!4.70e-11!69;UBERON:0000073!2.15e-10!94;UBERON:0001016!2.15e-10!94;UBERON:0004535!5.20e-10!110;UBERON:0003075!5.60e-10!86;UBERON:0007284!5.60e-10!86;UBERON:0001986!2.46e-09!18;UBERON:0004638!2.46e-09!18;UBERON:0004852!2.46e-09!18;UBERON:0003103!5.92e-09!69;UBERON:0002346!7.10e-09!90;UBERON:0001893!7.41e-09!34;UBERON:0000468!1.11e-08!659;UBERON:0002791!1.77e-08!33;UBERON:0002020!1.99e-08!34;UBERON:0003528!1.99e-08!34;UBERON:0001869!5.21e-08!32;UBERON:0001950!1.21e-07!20;UBERON:0000487!1.80e-07!22;UBERON:0002619!1.86e-07!22;UBERON:0000922!2.36e-07!612;UBERON:0000119!4.31e-07!312;UBERON:0003056!4.62e-07!61;UBERON:0000467!5.21e-07!625;UBERON:0000480!6.53e-07!626;UBERON:0000479!9.94e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.21e-15;114!UBERON:0004638;3.51e-09;18!UBERON:0001986;3.51e-09;18!UBERON:0004852;3.51e-09;18!UBERON:0002193;5.02e-07;42!UBERON:0002465;8.66e-07;10!UBERON:0000487;8.84e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-60,114;UBERON:0004111,2.70e-13,240;UBERON:0000025,1.25e-10,192;UBERON:0001009,2.08e-10,112;UBERON:0003103,1.85e-09,68;UBERON:0004638,3.36e-09,18;UBERON:0001986,3.36e-09,18;UBERON:0004852,3.36e-09,18;UBERON:0004535,4.63e-09,109;UBERON:0003887,2.89e-08,12;UBERON:0001049,3.60e-08,56;UBERON:0005068,3.60e-08,56;UBERON:0006241,3.60e-08,56;UBERON:0007135,3.60e-08,56;UBERON:0002780,2.05e-07,41;UBERON:0001890,2.05e-07,41;UBERON:0003080,2.05e-07,41;UBERON:0006240,2.05e-07,41;UBERON:0001017,3.41e-07,81;UBERON:0004876,4.62e-07,11;UBERON:0000080,5.23e-07,9;UBERON:0002120,5.23e-07,9;UBERON:0004875,5.23e-07,9;UBERON:0005721,5.23e-07,9;UBERON:0005754,5.23e-07,9;UBERON:0007297,5.23e-07,9;UBERON:0002465,5.63e-07,10;UBERON:0000073,6.95e-07,53;UBERON:0002616,6.95e-07,53;UBERON:0000487,8.56e-07,22 | |||
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| |||
|short_description=p1@PLVAP | |||
}} |
Revision as of 19:18, 11 September 2013
Short description: | p1@PLVAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLVAP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000252590_5end |
EntrezGene: | PLVAP |
HGNC: | 13635 |
UniProt: | Q9BX97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.97e-15 | 36 |
endothelial cell of vascular tree | 5.09e-13 | 24 |
meso-epithelial cell | 2.60e-11 | 45 |
blood vessel endothelial cell | 3.36e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.36e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-60 | 114 |
anatomical conduit | 2.70e-13 | 240 |
tube | 1.25e-10 | 192 |
circulatory system | 2.08e-10 | 112 |
compound organ | 1.85e-09 | 68 |
blood vessel endothelium | 3.36e-09 | 18 |
endothelium | 3.36e-09 | 18 |
cardiovascular system endothelium | 3.36e-09 | 18 |
cardiovascular system | 4.63e-09 | 109 |
intraembryonic coelom | 2.89e-08 | 12 |
neural tube | 3.60e-08 | 56 |
neural rod | 3.60e-08 | 56 |
future spinal cord | 3.60e-08 | 56 |
neural keel | 3.60e-08 | 56 |
regional part of forebrain | 2.05e-07 | 41 |
forebrain | 2.05e-07 | 41 |
anterior neural tube | 2.05e-07 | 41 |
future forebrain | 2.05e-07 | 41 |
central nervous system | 3.41e-07 | 81 |
urogenital ridge | 4.62e-07 | 11 |
mesonephros | 5.23e-07 | 9 |
pronephros | 5.23e-07 | 9 |
nephrogenic cord | 5.23e-07 | 9 |
pronephric mesoderm | 5.23e-07 | 9 |
rostral part of nephrogenic cord | 5.23e-07 | 9 |
presumptive pronephric mesoderm | 5.23e-07 | 9 |
lymphoid system | 5.63e-07 | 10 |
regional part of nervous system | 6.95e-07 | 53 |
regional part of brain | 6.95e-07 | 53 |
simple squamous epithelium | 8.56e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.