FFCP PHASE1:Hg19::chr19:11039194..11039204,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=78992|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28476|TSSclassifier=S|UniProt=|association_with_transcript=75bp_to_uc002mqb.2_5end|description=CAGE_peak_4_at_YIPF2_5end|id=chr19:11039194..11039204,-|ontology_enrichment_celltype=CL:0000066!6.05e-21!254;CL:0002076!1.60e-17!43;CL:0000223!1.87e-11!59;CL:0002251!9.15e-09!21;CL:0002368!1.41e-08!13|ontology_enrichment_celltype_v019=CL:0000349;2.85e-22;19!CL:0000244;3.42e-15;4!CL:0000731;3.42e-15;4!CL:0002541;2.61e-12;3!CL:0002577;2.71e-12;3!CL:0002076;5.17e-09;42!CL:0002536;2.36e-08;2!CL:0000317;3.79e-08;2!CL:1000448;3.79e-08;2!CL:0002308;3.79e-08;2!CL:0002140;3.79e-08;2!CL:0002537;1.15e-07;5!CL:0000622;6.76e-07;5|ontology_enrichment_celltype_v019_2=CL:0000349,3.04e-22,19;CL:0000244,2.53e-15,4;CL:0000731,2.53e-15,4;CL:0000066,2.59e-12,253;CL:0002577,2.63e-12,3;CL:0002541,3.05e-12,3;CL:0002076,1.37e-11,42;CL:0002536,2.51e-08,2;CL:0000317,4.31e-08,2;CL:1000448,4.31e-08,2;CL:0002308,4.31e-08,2;CL:0002140,4.31e-08,2;CL:0002537,1.10e-07,5;CL:0000223,1.28e-07,58;CL:0000622,6.78e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.65e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.15e-15!169;UBERON:0000925!3.15e-15!169;UBERON:0006595!3.15e-15!169;UBERON:0005631!7.21e-13!14;UBERON:0000158!7.21e-13!14;UBERON:0001004!2.62e-12!72;UBERON:0005911!5.09e-10!82;UBERON:0003124!7.46e-10!7;UBERON:0000077!1.13e-09!130;UBERON:0001007!1.47e-09!155;UBERON:0001555!1.47e-09!155;UBERON:0007026!1.47e-09!155;UBERON:0000464!2.12e-09!104;UBERON:0005153!4.97e-09!37;UBERON:0000065!1.56e-08!53;UBERON:0005178!1.67e-08!34;UBERON:0002224!1.67e-08!34;UBERON:0006554!3.59e-08!44;UBERON:0005181!4.31e-08!35;UBERON:0001008!7.71e-08!45;UBERON:0005177!1.51e-07!107;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000466!2.80e-07!126;UBERON:0009569!3.50e-07!113;UBERON:0005157!8.11e-07!51;UBERON:0000365!8.22e-07!5;UBERON:0000161!9.90e-07!35|ontology_enrichment_uberon_v019=UBERON:0005631;1.72e-23;10!UBERON:0000158;1.72e-23;10!UBERON:0000478;2.93e-20;24!UBERON:0001987;2.46e-15;4!UBERON:0000305;1.37e-13;7!UBERON:0003124;2.61e-12;3!UBERON:0000920;2.61e-12;3!UBERON:0000365;3.64e-12;5!UBERON:0000486;2.61e-10;12!UBERON:0005910;3.84e-10;6!UBERON:0000007;2.84e-08;2!UBERON:0002419;3.79e-08;2!UBERON:0007771;3.79e-08;2!UBERON:0003297;3.79e-08;2!UBERON:0001821;3.79e-08;2!UBERON:0003487;3.79e-08;2!UBERON:0001820;3.79e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.19e-37,14;UBERON:0000158,8.19e-37,14;UBERON:0003124,6.09e-26,7;UBERON:0000478,2.76e-20,24;UBERON:0001987,1.89e-15,4;UBERON:0004340,1.89e-15,4;UBERON:0000305,1.36e-13,7;UBERON:0000365,2.87e-12,5;UBERON:0000920,3.05e-12,3;UBERON:0004871,7.58e-12,8;UBERON:0004923,1.03e-10,66;UBERON:0005910,3.16e-10,6;UBERON:0006554,6.56e-09,47;UBERON:0001008,1.14e-08,48;UBERON:0000007,1.87e-08,2;UBERON:0002419,4.31e-08,2;UBERON:0007771,4.31e-08,2;UBERON:0003297,4.31e-08,2;UBERON:0001821,4.31e-08,2;UBERON:0003487,4.31e-08,2;UBERON:0001820,4.31e-08,2;UBERON:0005089,4.31e-08,2;UBERON:0005088,4.31e-08,2;UBERON:0000995,1.27e-07,21;UBERON:0005795,3.15e-07,22;UBERON:0003975,3.15e-07,22;UBERON:0000166,7.48e-07,22|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,3.44027511102112,9.07141518364156,1.31064823278103,4.22027165165526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.63647672354501,0.573609190778008,0.121973706129595,0.132529768321485,0.69716365721711,1.7622379352613,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,3.19769940212095,0.343135620597051,1.75600456653801,1.1240175325762,0.301586917234893,0.648119116109707,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0.93733833986777,1.17587489739202,0.567100388969546,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,3.03127571446259,8.32177197552485,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,4.81215528727884,0.368323955743585,0,0,0,0,0.385076685522074,0,0,0.316654886678627,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0.2238747547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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=78992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28476 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=75bp_to_uc002mqb.2_5end | |||
|description=CAGE_peak_4_at_YIPF2_5end | |||
|id=chr19:11039194..11039204,- | |||
|ontology_enrichment_celltype=CL:0000066!6.05e-21!254;CL:0002076!1.60e-17!43;CL:0000223!1.87e-11!59;CL:0002251!9.15e-09!21;CL:0002368!1.41e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.85e-22;19!CL:0000244;3.42e-15;4!CL:0000731;3.42e-15;4!CL:0002541;2.61e-12;3!CL:0002577;2.71e-12;3!CL:0002076;5.17e-09;42!CL:0002536;2.36e-08;2!CL:0000317;3.79e-08;2!CL:1000448;3.79e-08;2!CL:0002308;3.79e-08;2!CL:0002140;3.79e-08;2!CL:0002537;1.15e-07;5!CL:0000622;6.76e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.04e-22,19;CL:0000244,2.53e-15,4;CL:0000731,2.53e-15,4;CL:0000066,2.59e-12,253;CL:0002577,2.63e-12,3;CL:0002541,3.05e-12,3;CL:0002076,1.37e-11,42;CL:0002536,2.51e-08,2;CL:0000317,4.31e-08,2;CL:1000448,4.31e-08,2;CL:0002308,4.31e-08,2;CL:0002140,4.31e-08,2;CL:0002537,1.10e-07,5;CL:0000223,1.28e-07,58;CL:0000622,6.78e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.65e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-15!169;UBERON:0000925!3.15e-15!169;UBERON:0006595!3.15e-15!169;UBERON:0005631!7.21e-13!14;UBERON:0000158!7.21e-13!14;UBERON:0001004!2.62e-12!72;UBERON:0005911!5.09e-10!82;UBERON:0003124!7.46e-10!7;UBERON:0000077!1.13e-09!130;UBERON:0001007!1.47e-09!155;UBERON:0001555!1.47e-09!155;UBERON:0007026!1.47e-09!155;UBERON:0000464!2.12e-09!104;UBERON:0005153!4.97e-09!37;UBERON:0000065!1.56e-08!53;UBERON:0005178!1.67e-08!34;UBERON:0002224!1.67e-08!34;UBERON:0006554!3.59e-08!44;UBERON:0005181!4.31e-08!35;UBERON:0001008!7.71e-08!45;UBERON:0005177!1.51e-07!107;UBERON:0004921!2.65e-07!129;UBERON:0004185!2.65e-07!129;UBERON:0000466!2.80e-07!126;UBERON:0009569!3.50e-07!113;UBERON:0005157!8.11e-07!51;UBERON:0000365!8.22e-07!5;UBERON:0000161!9.90e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.72e-23;10!UBERON:0000158;1.72e-23;10!UBERON:0000478;2.93e-20;24!UBERON:0001987;2.46e-15;4!UBERON:0000305;1.37e-13;7!UBERON:0003124;2.61e-12;3!UBERON:0000920;2.61e-12;3!UBERON:0000365;3.64e-12;5!UBERON:0000486;2.61e-10;12!UBERON:0005910;3.84e-10;6!UBERON:0000007;2.84e-08;2!UBERON:0002419;3.79e-08;2!UBERON:0007771;3.79e-08;2!UBERON:0003297;3.79e-08;2!UBERON:0001821;3.79e-08;2!UBERON:0003487;3.79e-08;2!UBERON:0001820;3.79e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.19e-37,14;UBERON:0000158,8.19e-37,14;UBERON:0003124,6.09e-26,7;UBERON:0000478,2.76e-20,24;UBERON:0001987,1.89e-15,4;UBERON:0004340,1.89e-15,4;UBERON:0000305,1.36e-13,7;UBERON:0000365,2.87e-12,5;UBERON:0000920,3.05e-12,3;UBERON:0004871,7.58e-12,8;UBERON:0004923,1.03e-10,66;UBERON:0005910,3.16e-10,6;UBERON:0006554,6.56e-09,47;UBERON:0001008,1.14e-08,48;UBERON:0000007,1.87e-08,2;UBERON:0002419,4.31e-08,2;UBERON:0007771,4.31e-08,2;UBERON:0003297,4.31e-08,2;UBERON:0001821,4.31e-08,2;UBERON:0003487,4.31e-08,2;UBERON:0001820,4.31e-08,2;UBERON:0005089,4.31e-08,2;UBERON:0005088,4.31e-08,2;UBERON:0000995,1.27e-07,21;UBERON:0005795,3.15e-07,22;UBERON:0003975,3.15e-07,22;UBERON:0000166,7.48e-07,22 | |||
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|short_description=p4@YIPF2 | |||
}} |
Revision as of 18:37, 11 September 2013
Short description: | p4@YIPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_YIPF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_uc002mqb.2_5end |
EntrezGene: | YIPF2 |
HGNC: | 28476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.04e-22 | 19 |
transitional epithelial cell | 2.53e-15 | 4 |
urothelial cell | 2.53e-15 | 4 |
epithelial cell | 2.59e-12 | 253 |
placental epithelial cell | 2.63e-12 | 3 |
chorionic membrane mesenchymal stem cell | 3.05e-12 | 3 |
endo-epithelial cell | 1.37e-11 | 42 |
amniotic epithelial cell | 2.51e-08 | 2 |
sebum secreting cell | 4.31e-08 | 2 |
epithelial cell of sweat gland | 4.31e-08 | 2 |
epithelial cell of skin gland | 4.31e-08 | 2 |
acinar cell of sebaceous gland | 4.31e-08 | 2 |
amnion mesenchymal stem cell | 1.10e-07 | 5 |
endodermal cell | 1.28e-07 | 58 |
acinar cell | 6.78e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.19e-37 | 14 |
membranous layer | 8.19e-37 | 14 |
chorion | 6.09e-26 | 7 |
extraembryonic structure | 2.76e-20 | 24 |
placenta | 1.89e-15 | 4 |
allantois | 1.89e-15 | 4 |
amnion | 1.36e-13 | 7 |
urothelium | 2.87e-12 | 5 |
egg chorion | 3.05e-12 | 3 |
somatic layer of lateral plate mesoderm | 7.58e-12 | 8 |
organ component layer | 1.03e-10 | 66 |
transitional epithelium | 3.16e-10 | 6 |
urinary system structure | 6.56e-09 | 47 |
renal system | 1.14e-08 | 48 |
pituitary gland | 1.87e-08 | 2 |
skin gland | 4.31e-08 | 2 |
epidermis gland | 4.31e-08 | 2 |
gland of integumental system | 4.31e-08 | 2 |
sebaceous gland | 4.31e-08 | 2 |
skin sebaceous gland | 4.31e-08 | 2 |
sweat gland | 4.31e-08 | 2 |
sweat gland placode | 4.31e-08 | 2 |
sebaceous gland placode | 4.31e-08 | 2 |
uterus | 1.27e-07 | 21 |
embryonic uterus | 3.15e-07 | 22 |
internal female genitalia | 3.15e-07 | 22 |
oral opening | 7.48e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.