FFCP PHASE1:Hg19::chr18:61254426..61254435,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5275|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8944|TSSclassifier=S|UniProt=Q9UIV8|association_with_transcript=-98bp_to_ENST00000269489,NM_012397,uc002ljc.2,uc002ljd.2,uc010xep.1,uc010xeq.1,uc010xer.1_5end|description=CAGE_peak_9_at_SERPINB13_5end|id=chr18:61254426..61254435,+|ontology_enrichment_celltype=CL:0002251!1.50e-10!21;CL:0002076!2.07e-10!43;CL:0000223!6.23e-09!59;CL:0000066!1.39e-07!254;CL:0002336!1.58e-07!1;CL:0002261!1.58e-07!1;CL:0002170!1.58e-07!1;CL:1001319!2.98e-07!1;CL:1000600!2.98e-07!1;CL:0000076!5.97e-07!62|ontology_enrichment_celltype_v019=CL:0002535;8.34e-18;2!CL:0002623;2.45e-12;3!CL:0000622;6.33e-08;5!CL:0002251;1.33e-07;20!CL:0000154;8.25e-07;6|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-17,2;CL:0002623,1.85e-12,3;CL:0000622,5.35e-08,5;CL:0002251,1.17e-07,20;CL:0000154,7.17e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!4.76e-22!14;DOID:3151!5.96e-08!1;DOID:3149!5.96e-08!1|ontology_enrichment_disease_v019=DOID:3151;4.27e-34;1!DOID:3149;4.27e-34;1!DOID:4362;2.72e-27;5!DOID:1749;6.44e-22;14!DOID:3451;8.34e-18;2!DOID:4159;8.34e-18;2!DOID:0060122;8.34e-18;2|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:4362,3.55e-27,5;DOID:1749,6.21e-22,14;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2|ontology_enrichment_uberon=UBERON:0000341!8.65e-14!2;UBERON:0001255!5.73e-13!2;UBERON:0001556!5.73e-13!2;UBERON:0000002!3.71e-10!6;UBERON:0001560!3.71e-10!6;UBERON:0000997!6.80e-08!1;UBERON:0005056!6.80e-08!1;UBERON:0004645!2.98e-07!1;UBERON:0001256!2.98e-07!1;UBERON:0001259!2.98e-07!1;UBERON:0001043!3.95e-07!4;UBERON:0009143!3.95e-07!4|ontology_enrichment_uberon_v019=UBERON:0000002;6.06e-23;6!UBERON:0001560;6.06e-23;6!UBERON:0006955;8.34e-18;2!UBERON:0004801;8.34e-18;2!UBERON:0000014;1.38e-09;4!UBERON:0003343;1.38e-09;4!UBERON:0004785;1.38e-09;4!UBERON:0000995;8.89e-09;17!UBERON:0003975;2.42e-08;18!UBERON:0000161;5.93e-08;19!UBERON:0000166;5.93e-08;19!UBERON:0004175;2.77e-07;21!UBERON:0001044;8.25e-07;6!UBERON:0000974;8.25e-07;6!UBERON:0003293;8.25e-07;6!UBERON:0003294;8.25e-07;6!UBERON:0010047;8.25e-07;6!UBERON:0003408;8.25e-07;6!UBERON:0000167;8.25e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000002,7.58e-23,6;UBERON:0001560,7.58e-23,6;UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0003343,1.22e-09,4;UBERON:0004785,1.22e-09,4;UBERON:0000014,1.70e-09,4;UBERON:0000995,2.95e-07,21;UBERON:0000166,4.79e-07,22;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22;UBERON:0001044,7.17e-07,6;UBERON:0003293,7.17e-07,6;UBERON:0003294,7.17e-07,6;UBERON:0010047,7.17e-07,6;UBERON:0000167,7.17e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979923974143776,1.04471047896483,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0,0,0,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p9@SERPINB13}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5275 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8944 | |||
|TSSclassifier=S | |||
|UniProt=Q9UIV8 | |||
|association_with_transcript=-98bp_to_ENST00000269489,NM_012397,uc002ljc.2,uc002ljd.2,uc010xep.1,uc010xeq.1,uc010xer.1_5end | |||
|description=CAGE_peak_9_at_SERPINB13_5end | |||
|id=chr18:61254426..61254435,+ | |||
|ontology_enrichment_celltype=CL:0002251!1.50e-10!21;CL:0002076!2.07e-10!43;CL:0000223!6.23e-09!59;CL:0000066!1.39e-07!254;CL:0002336!1.58e-07!1;CL:0002261!1.58e-07!1;CL:0002170!1.58e-07!1;CL:1001319!2.98e-07!1;CL:1000600!2.98e-07!1;CL:0000076!5.97e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002535;8.34e-18;2!CL:0002623;2.45e-12;3!CL:0000622;6.33e-08;5!CL:0002251;1.33e-07;20!CL:0000154;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.07e-17,2;CL:0002623,1.85e-12,3;CL:0000622,5.35e-08,5;CL:0002251,1.17e-07,20;CL:0000154,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.76e-22!14;DOID:3151!5.96e-08!1;DOID:3149!5.96e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.27e-34;1!DOID:3149;4.27e-34;1!DOID:4362;2.72e-27;5!DOID:1749;6.44e-22;14!DOID:3451;8.34e-18;2!DOID:4159;8.34e-18;2!DOID:0060122;8.34e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:4362,3.55e-27,5;DOID:1749,6.21e-22,14;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!8.65e-14!2;UBERON:0001255!5.73e-13!2;UBERON:0001556!5.73e-13!2;UBERON:0000002!3.71e-10!6;UBERON:0001560!3.71e-10!6;UBERON:0000997!6.80e-08!1;UBERON:0005056!6.80e-08!1;UBERON:0004645!2.98e-07!1;UBERON:0001256!2.98e-07!1;UBERON:0001259!2.98e-07!1;UBERON:0001043!3.95e-07!4;UBERON:0009143!3.95e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;6.06e-23;6!UBERON:0001560;6.06e-23;6!UBERON:0006955;8.34e-18;2!UBERON:0004801;8.34e-18;2!UBERON:0000014;1.38e-09;4!UBERON:0003343;1.38e-09;4!UBERON:0004785;1.38e-09;4!UBERON:0000995;8.89e-09;17!UBERON:0003975;2.42e-08;18!UBERON:0000161;5.93e-08;19!UBERON:0000166;5.93e-08;19!UBERON:0004175;2.77e-07;21!UBERON:0001044;8.25e-07;6!UBERON:0000974;8.25e-07;6!UBERON:0003293;8.25e-07;6!UBERON:0003294;8.25e-07;6!UBERON:0010047;8.25e-07;6!UBERON:0003408;8.25e-07;6!UBERON:0000167;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,7.58e-23,6;UBERON:0001560,7.58e-23,6;UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0003343,1.22e-09,4;UBERON:0004785,1.22e-09,4;UBERON:0000014,1.70e-09,4;UBERON:0000995,2.95e-07,21;UBERON:0000166,4.79e-07,22;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22;UBERON:0001044,7.17e-07,6;UBERON:0003293,7.17e-07,6;UBERON:0003294,7.17e-07,6;UBERON:0010047,7.17e-07,6;UBERON:0000167,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979923974143776,1.04471047896483,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0,0,0,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@SERPINB13 | |||
}} |
Revision as of 18:01, 11 September 2013
Short description: | p9@SERPINB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SERPINB13_5end |
Coexpression cluster: | NA |
Association with transcript: | -98bp_to_ENST00000269489, NM_012397, uc002ljc.2, uc002ljd.2, uc010xep.1, uc010xeq.1, uc010xer.1_5end |
EntrezGene: | SERPINB13 |
HGNC: | 8944 |
UniProt: | Q9UIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.07e-17 | 2 |
acinar cell of salivary gland | 1.85e-12 | 3 |
acinar cell | 5.35e-08 | 5 |
epithelial cell of alimentary canal | 1.17e-07 | 20 |
protein secreting cell | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 7.58e-23 | 6 |
neck of organ | 7.58e-23 | 6 |
uterine epithelium | 1.07e-17 | 2 |
cervix epithelium | 1.07e-17 | 2 |
mucosa of oral region | 1.22e-09 | 4 |
respiratory system mucosa | 1.22e-09 | 4 |
zone of skin | 1.70e-09 | 4 |
uterus | 2.95e-07 | 21 |
oral opening | 4.79e-07 | 22 |
embryonic uterus | 5.74e-07 | 22 |
internal female genitalia | 5.74e-07 | 22 |
saliva-secreting gland | 7.17e-07 | 6 |
gland of oral region | 7.17e-07 | 6 |
gland of foregut | 7.17e-07 | 6 |
oral gland | 7.17e-07 | 6 |
oral cavity | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.85e-34 | 1 |
keratoacanthoma | 9.85e-34 | 1 |
cervical cancer | 3.55e-27 | 5 |
squamous cell carcinoma | 6.21e-22 | 14 |
skin carcinoma | 1.27e-17 | 2 |
skin cancer | 1.27e-17 | 2 |
integumentary system cancer | 1.27e-17 | 2 |
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