FFCP PHASE1:Hg19::chr18:56296299..56296306,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=S|UniProt=Q86TB3|association_with_transcript=-110bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end|coexpression_cluster_id=C1057|description=CAGE_peak_38_at_ALPK2_5end|id=chr18:56296299..56296306,-|ontology_enrichment_celltype=CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1;CL:0002127!9.48e-07!1;CL:0000914!9.48e-07!1;CL:0000911!9.48e-07!1;CL:0000814!9.48e-07!1;CL:0002042!9.48e-07!1;CL:0002039!9.48e-07!1;CL:0002040!9.48e-07!1;CL:0002041!9.48e-07!1|ontology_enrichment_celltype_v019=CL:0000946;6.31e-21;1!CL:0000786;6.31e-21;1|ontology_enrichment_celltype_v019_2=CL:0000946,9.43e-21,1;CL:0000786,9.43e-21,1;CL:0000980,9.43e-21,1;CL:0000785,4.52e-11,2;CL:0000955,4.52e-11,2;CL:0000818,4.52e-11,2;CL:0000954,4.52e-11,2;CL:0000816,4.52e-11,2;CL:0000817,8.29e-08,3|ontology_enrichment_development_v019=UBERON:0010227;2.30e-21;1!UBERON:0004140;2.30e-21;1!UBERON:0010226;6.31e-21;1!CL:0000954;3.70e-11;2|ontology_enrichment_disease=DOID:1287!9.14e-13!4;DOID:114!2.70e-12!2;DOID:178!7.19e-07!1;DOID:326!7.19e-07!1;DOID:3978!7.19e-07!1;DOID:3394!7.19e-07!1;DOID:5844!7.19e-07!1|ontology_enrichment_disease_v019=DOID:114;2.23e-11;2|ontology_enrichment_disease_v019_2=DOID:114,2.02e-11,2|ontology_enrichment_uberon=UBERON:0002370!2.56e-12!4;UBERON:0005058!2.56e-12!4;UBERON:0009113!2.56e-12!4;UBERON:0003295!2.56e-12!4;UBERON:0005562!2.56e-12!4;UBERON:0004177!3.29e-12!7;UBERON:0007100!4.54e-12!27;UBERON:0000974!1.37e-08!10;UBERON:0001042!1.78e-08!10;UBERON:0009145!1.78e-08!10;UBERON:0004151!1.79e-08!3;UBERON:0003978!2.22e-08!3;UBERON:0009751!2.22e-08!3;UBERON:0000946!2.22e-08!3;UBERON:0002523!2.22e-08!3;UBERON:0005983!2.22e-08!3;UBERON:0002165!2.22e-08!3;UBERON:0002062!2.22e-08!3;UBERON:0007280!2.22e-08!3;UBERON:0003351!2.26e-08!6;UBERON:0006562!1.03e-07!11;UBERON:0002079!5.13e-07!1;UBERON:0002146!5.43e-07!1;UBERON:0005623!5.43e-07!1;UBERON:0002084!6.08e-07!1;UBERON:0002082!6.08e-07!1;UBERON:0004706!6.08e-07!1;UBERON:0005418!6.43e-07!1;UBERON:0001389!6.43e-07!1;UBERON:0000026!6.43e-07!1;UBERON:0008784!6.43e-07!1;UBERON:0006058!6.43e-07!1;UBERON:0003663!6.43e-07!1;UBERON:0001383!6.43e-07!1;UBERON:0004256!6.43e-07!1;UBERON:0002529!6.43e-07!1;UBERON:0004708!6.43e-07!1;UBERON:0002101!6.43e-07!1;UBERON:0004709!6.43e-07!1;UBERON:0003661!6.43e-07!1;UBERON:0002471!6.43e-07!1;UBERON:0004357!6.43e-07!1;UBERON:0009872!6.43e-07!1;UBERON:0004347!6.43e-07!1;UBERON:0005420!6.43e-07!1;UBERON:0005732!6.43e-07!1;UBERON:0006057!6.43e-07!1;UBERON:0000978!6.43e-07!1;UBERON:0002103!6.43e-07!1;UBERON:0001665!6.43e-07!1;UBERON:0003823!6.43e-07!1;UBERON:0000154!6.43e-07!1;UBERON:0005733!6.43e-07!1;UBERON:0005730!6.43e-07!1;UBERON:0002135!8.03e-07!1;UBERON:0000989!8.49e-07!1;UBERON:0008811!8.49e-07!1;UBERON:0006258!8.49e-07!1;UBERON:0005876!8.49e-07!1;UBERON:0004874!8.49e-07!1;UBERON:0007029!8.97e-07!1|ontology_enrichment_uberon_v019=UBERON:0004151;2.38e-27;3!UBERON:0002079;2.30e-21;1!UBERON:0002084;6.31e-21;1!UBERON:0002146;6.31e-21;1!UBERON:0001389;6.31e-21;1!UBERON:0000026;6.31e-21;1!UBERON:0008784;6.31e-21;1!UBERON:0006058;6.31e-21;1!UBERON:0003663;6.31e-21;1!UBERON:0004256;6.31e-21;1!UBERON:0002082;6.31e-21;1!UBERON:0004708;6.31e-21;1!UBERON:0002101;6.31e-21;1!UBERON:0004709;6.31e-21;1!UBERON:0005623;6.31e-21;1!UBERON:0002529;6.31e-21;1!UBERON:0010538;6.31e-21;1!UBERON:0003661;6.31e-21;1!UBERON:0010890;6.31e-21;1!UBERON:0002471;6.31e-21;1!UBERON:0001383;6.31e-21;1!UBERON:0010758;6.31e-21;1!UBERON:0010707;6.31e-21;1!UBERON:0000978;6.31e-21;1!UBERON:0002103;6.31e-21;1!UBERON:0001665;6.31e-21;1!UBERON:0003823;6.31e-21;1!UBERON:0000154;6.31e-21;1!UBERON:0010709;6.31e-21;1!UBERON:0007100;5.39e-20;25!UBERON:0000948;8.27e-15;22!UBERON:0002081;2.23e-11;2!UBERON:0005090;3.70e-11;2!UBERON:0001630;3.70e-11;2!UBERON:0003978;7.25e-08;3!UBERON:0000946;7.25e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.11e-27,3;UBERON:0002079,3.45e-21,1;UBERON:0002146,4.22e-21,1;UBERON:0005623,4.22e-21,1;UBERON:0002084,6.31e-21,1;UBERON:0002082,6.31e-21,1;UBERON:0010226,6.31e-21,1;UBERON:0005418,7.72e-21,1;UBERON:0001389,7.72e-21,1;UBERON:0000026,7.72e-21,1;UBERON:0008784,7.72e-21,1;UBERON:0006058,7.72e-21,1;UBERON:0003663,7.72e-21,1;UBERON:0004256,7.72e-21,1;UBERON:0004708,7.72e-21,1;UBERON:0002101,7.72e-21,1;UBERON:0004709,7.72e-21,1;UBERON:0002529,7.72e-21,1;UBERON:0010538,7.72e-21,1;UBERON:0003661,7.72e-21,1;UBERON:0010890,7.72e-21,1;UBERON:0002471,7.72e-21,1;UBERON:0001383,7.72e-21,1;UBERON:0004357,7.72e-21,1;UBERON:0004347,7.72e-21,1;UBERON:0005420,7.72e-21,1;UBERON:0005732,7.72e-21,1;UBERON:0010758,7.72e-21,1;UBERON:0010707,7.72e-21,1;UBERON:0000978,7.72e-21,1;UBERON:0002103,7.72e-21,1;UBERON:0001665,7.72e-21,1;UBERON:0003823,7.72e-21,1;UBERON:0000154,7.72e-21,1;UBERON:0010709,7.72e-21,1;UBERON:0005733,7.72e-21,1;UBERON:0005730,7.72e-21,1;UBERON:0007100,1.40e-18,27;UBERON:0000948,1.23e-13,24;UBERON:0005498,1.23e-13,24;UBERON:0004140,1.23e-13,24;UBERON:0009881,1.23e-13,24;UBERON:0004141,1.23e-13,24;UBERON:0003084,1.23e-13,24;UBERON:0007005,1.23e-13,24;UBERON:0004139,1.23e-13,24;UBERON:0004291,1.23e-13,24;UBERON:0002081,2.73e-11,2;UBERON:0010227,2.73e-11,2;UBERON:0005090,4.09e-11,2;UBERON:0001630,4.09e-11,2;UBERON:0003978,6.34e-08,3;UBERON:0009751,6.34e-08,3;UBERON:0000946,6.34e-08,3;UBERON:0002523,6.34e-08,3;UBERON:0005983,6.34e-08,3;UBERON:0002165,6.34e-08,3;UBERON:0002062,6.34e-08,3;UBERON:0007280,6.34e-08,3;UBERON:0003103,1.91e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,1.83328339209347,0,0.998395002494955,2.57535628881943,0.669514372325618,2.95607278941596,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37133958277533,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,2.4072715192173,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p38@ALPK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=S | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=-110bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_38_at_ALPK2_5end | |||
|id=chr18:56296299..56296306,- | |||
|ontology_enrichment_celltype=CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1;CL:0002127!9.48e-07!1;CL:0000914!9.48e-07!1;CL:0000911!9.48e-07!1;CL:0000814!9.48e-07!1;CL:0002042!9.48e-07!1;CL:0002039!9.48e-07!1;CL:0002040!9.48e-07!1;CL:0002041!9.48e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;6.31e-21;1!CL:0000786;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.43e-21,1;CL:0000786,9.43e-21,1;CL:0000980,9.43e-21,1;CL:0000785,4.52e-11,2;CL:0000955,4.52e-11,2;CL:0000818,4.52e-11,2;CL:0000954,4.52e-11,2;CL:0000816,4.52e-11,2;CL:0000817,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.30e-21;1!UBERON:0004140;2.30e-21;1!UBERON:0010226;6.31e-21;1!CL:0000954;3.70e-11;2 | |||
|ontology_enrichment_disease=DOID:1287!9.14e-13!4;DOID:114!2.70e-12!2;DOID:178!7.19e-07!1;DOID:326!7.19e-07!1;DOID:3978!7.19e-07!1;DOID:3394!7.19e-07!1;DOID:5844!7.19e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;2.23e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.02e-11,2 | |||
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|short_description=p38@ALPK2 | |||
}} |
Revision as of 17:53, 11 September 2013
Short description: | p38@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | -110bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.43e-21 | 1 |
plasma cell | 9.43e-21 | 1 |
plasmablast | 9.43e-21 | 1 |
mature B cell | 4.52e-11 | 2 |
pre-B-II cell | 4.52e-11 | 2 |
transitional stage B cell | 4.52e-11 | 2 |
small pre-B-II cell | 4.52e-11 | 2 |
immature B cell | 4.52e-11 | 2 |
precursor B cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.02e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.