FFCP PHASE1:Hg19::chr18:56246825..56246890,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=W|UniProt=Q86TB3|association_with_transcript=197bp_to_BX647639_5end|coexpression_cluster_id=C2467|description=CAGE_peak_5_at_ALPK2_5end|id=chr18:56246825..56246890,-|ontology_enrichment_celltype=CL:0000055!2.07e-19!180;CL:0000057!2.45e-16!75;CL:0000548!5.12e-09!679;CL:0000004!5.12e-09!679;CL:0000255!5.12e-09!679;CL:0000012!1.19e-08!682;CL:0002620!1.24e-08!23;CL:0000077!1.85e-08!19;CL:0000144!9.94e-07!625|ontology_enrichment_celltype_v019=CL:0002620;8.37e-12;23!CL:0000349;1.40e-11;19!CL:0000499;4.62e-08;28!CL:0000134;3.07e-07;55!CL:0000128;3.43e-07;7!CL:0000126;3.43e-07;7!CL:0000127;3.43e-07;7|ontology_enrichment_celltype_v019_2=CL:0000057,2.49e-13,76;CL:0002620,7.55e-12,23;CL:0000349,1.19e-11,19;CL:0000499,3.41e-08,28;CL:0000128,3.50e-07,7;CL:0000126,3.50e-07,7;CL:0000127,3.50e-07,7;CL:0002453,3.50e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.88e-07;5!DOID:450;1.88e-07;5!DOID:66;1.88e-07;5!DOID:423;1.88e-07;5!DOID:0080000;1.88e-07;5!DOID:11722;1.88e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.26e-07,5;DOID:450,2.26e-07,5;DOID:66,2.26e-07,5;DOID:423,2.26e-07,5;DOID:0080000,2.26e-07,5;DOID:11722,2.26e-07,5|ontology_enrichment_uberon=UBERON:0001737!2.97e-08!9;UBERON:0000478!4.39e-08!24;UBERON:0005631!2.30e-07!14;UBERON:0000158!2.30e-07!14|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-11;9!UBERON:0001557;1.17e-11;9!UBERON:0000478;7.46e-10;24!UBERON:0005631;1.61e-08;10!UBERON:0000158;1.61e-08;10!UBERON:0002097;4.41e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.05e-12,9;UBERON:0000478,6.56e-10,24;UBERON:0002097,3.65e-09,41;UBERON:0005631,1.67e-08,14;UBERON:0000158,1.67e-08,14;UBERON:0002199,1.63e-07,46;UBERON:0002416,1.63e-07,46;UBERON:0004871,4.34e-07,8|phase1_expression=1.81678379270557,2.99740733447376,0.845726424575827,6.00439790118782,1.78784437770915,1.74467704820074,0,0,0,0,0,2.83973783769224,1.31883489114227,0.618831764800233,0.331397375727916,0,0.602694528023977,0,0,3.44738962615006,4.89601658986207,4.07491137921514,8.5870796139317,8.34933992944594,9.0390700508258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,2.53007406669196,4.01070328508712,2.17269778441236,0,1.94653948121054,0.378139268656271,0.886917589850256,2.45937399940753,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0.25326102332916,8.60659675285922,1.43418310374407,0,3.92474320099615,0,2.22000793575444,0.622422070799533,0.269421344139376,0,1.21085942115945,0.576175924479999,0.937285727335186,0,0,0,0.23486899728753,0.323745888736263,0,0.204154171254893,0.122834317311768,0.206651562351531,4.75201142912821,2.71993622206413,0,0,0.336672227908132,0,1.10825646193673,2.19488810440419,2.75839016219118,2.70428506031874,0,7.71375433462106,12.1727711626583,6.14602513362729,2.10063767259082,6.80146692973697,12.6243864622358,5.3973888336161,5.56961896396179,3.89748020644795,5.04867548488229,12.5187862153527,7.92065678412178,6.74518225781567,1.81353776809752,1.52604533079439,0,0,0,0,0,0,0,0,0,9.38697193978896,14.1513006402435,0,1.85747171212792,1.44375896333917,6.86179440231095,6.74338760312407,3.85617647813571,4.96322877295773,6.972142210957,5.93176547777742,6.0674088672074,5.29797955838434,3.8474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.34779121492523,1.76113041353732,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,4.03671903643299,7.41132117016576,2.12681028880755,5.55868377758444,0,0.845302752556,6.38251479803689,5.2003718455683,0,0,0,1.57275793023962,0.542621605391443,1.64648067356154,0.325736184293735,1.42156779497018,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0,0,7.90762023122223,12.6348129417525,0,0.289562613335158,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,6.65506756898583,11.9547422494098,14.3509197680881,13.5884041391547,0.902838299183157,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,1.91143951829782,0,0.343143423810856,0,0,0,0,4.99306318531491,2.41912234663744,2.97729369382532,10.4354141835882,2.80660094433074,1.28139149255701,7.67560873600055,2.0911009748669,2.96836132889982,0.925258162815933,0.710246901252508,0.739144404124282,0,0.929683027679674,0,0,0,2.52591785962135,3.09554985611419,1.83574180943194,0.451199612907412,0,0,0,0.422206515571503,0,0,0.863663664408557,0,0,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=W | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=197bp_to_BX647639_5end | |||
|coexpression_cluster_id=C2467 | |||
|description=CAGE_peak_5_at_ALPK2_5end | |||
|id=chr18:56246825..56246890,- | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-19!180;CL:0000057!2.45e-16!75;CL:0000548!5.12e-09!679;CL:0000004!5.12e-09!679;CL:0000255!5.12e-09!679;CL:0000012!1.19e-08!682;CL:0002620!1.24e-08!23;CL:0000077!1.85e-08!19;CL:0000144!9.94e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.37e-12;23!CL:0000349;1.40e-11;19!CL:0000499;4.62e-08;28!CL:0000134;3.07e-07;55!CL:0000128;3.43e-07;7!CL:0000126;3.43e-07;7!CL:0000127;3.43e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.49e-13,76;CL:0002620,7.55e-12,23;CL:0000349,1.19e-11,19;CL:0000499,3.41e-08,28;CL:0000128,3.50e-07,7;CL:0000126,3.50e-07,7;CL:0000127,3.50e-07,7;CL:0002453,3.50e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.88e-07;5!DOID:450;1.88e-07;5!DOID:66;1.88e-07;5!DOID:423;1.88e-07;5!DOID:0080000;1.88e-07;5!DOID:11722;1.88e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.26e-07,5;DOID:450,2.26e-07,5;DOID:66,2.26e-07,5;DOID:423,2.26e-07,5;DOID:0080000,2.26e-07,5;DOID:11722,2.26e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.97e-08!9;UBERON:0000478!4.39e-08!24;UBERON:0005631!2.30e-07!14;UBERON:0000158!2.30e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.17e-11;9!UBERON:0001557;1.17e-11;9!UBERON:0000478;7.46e-10;24!UBERON:0005631;1.61e-08;10!UBERON:0000158;1.61e-08;10!UBERON:0002097;4.41e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.05e-12,9;UBERON:0000478,6.56e-10,24;UBERON:0002097,3.65e-09,41;UBERON:0005631,1.67e-08,14;UBERON:0000158,1.67e-08,14;UBERON:0002199,1.63e-07,46;UBERON:0002416,1.63e-07,46;UBERON:0004871,4.34e-07,8 | |||
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| |||
|short_description=p5@ALPK2 | |||
}} |
Revision as of 17:52, 11 September 2013
Short description: | p5@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ALPK2_5end |
Coexpression cluster: | C2467_Olfactory_Fibroblast_Hair_alveolar_glioblastoma_Preadipocyte_Ewing |
Association with transcript: | 197bp_to_BX647639_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.49e-13 | 76 |
skin fibroblast | 7.55e-12 | 23 |
extraembryonic cell | 1.19e-11 | 19 |
stromal cell | 3.41e-08 | 28 |
oligodendrocyte | 3.50e-07 | 7 |
macroglial cell | 3.50e-07 | 7 |
astrocyte | 3.50e-07 | 7 |
oligodendrocyte precursor cell | 3.50e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.05e-12 | 9 |
extraembryonic structure | 6.56e-10 | 24 |
skin of body | 3.65e-09 | 41 |
extraembryonic membrane | 1.67e-08 | 14 |
membranous layer | 1.67e-08 | 14 |
integument | 1.63e-07 | 46 |
integumental system | 1.63e-07 | 46 |
somatic layer of lateral plate mesoderm | 4.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.26e-07 | 5 |
myotonic disease | 2.26e-07 | 5 |
muscle tissue disease | 2.26e-07 | 5 |
myopathy | 2.26e-07 | 5 |
muscular disease | 2.26e-07 | 5 |
myotonic dystrophy | 2.26e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.