FFCP PHASE1:Hg19::chr18:21479321..21479334,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C363|description=CAGE_peak_at_chr18:21479321..21479334,+|id=chr18:21479321..21479334,+|ontology_enrichment_celltype=CL:0002076!1.37e-24!43;CL:0000066!4.83e-20!254;CL:0000223!7.52e-18!59;CL:0002368!3.12e-12!13;CL:0002251!1.65e-10!21;CL:0000349!3.65e-09!3;CL:0002577!3.65e-09!3;CL:0002621!8.61e-09!3;CL:0002328!1.04e-08!3;CL:0002159!2.01e-07!13;CL:0002327!3.08e-07!4|ontology_enrichment_celltype_v019=CL:0002327;8.50e-22;4!CL:0002541;3.88e-14;3!CL:0002166;5.37e-14;3!CL:0002231;1.02e-13;3!CL:0002577;2.06e-13;3!CL:0002159;2.68e-11;14!CL:0002336;1.10e-10;1!CL:0002261;1.10e-10;1!CL:0002170;1.10e-10;1!CL:0002076;5.43e-09;42!CL:0000349;2.69e-08;19!CL:0000240;2.49e-07;6!CL:0000311;2.49e-07;6!CL:0000079;2.49e-07;6!CL:0000237;2.49e-07;6!CL:0002368;3.73e-07;13|ontology_enrichment_celltype_v019_2=CL:0002327,5.34e-22,4;CL:0002541,3.64e-14,3;CL:0002166,5.37e-14,3;CL:0002231,1.02e-13,3;CL:0002577,1.32e-13,3;CL:0002159,2.95e-11,14;CL:0000066,1.07e-10,253;CL:0002336,1.61e-10,1;CL:0002261,1.61e-10,1;CL:0002170,1.61e-10,1;CL:0002076,2.52e-10,42;CL:0000349,2.31e-08,19;CL:0000223,2.80e-07,58;CL:0000240,2.87e-07,6;CL:0000311,2.87e-07,6;CL:0000079,2.87e-07,6;CL:0000237,2.87e-07,6;CL:0000036,2.87e-07,6;CL:0000357,2.87e-07,6;CL:0000114,2.87e-07,6;CL:0002368,3.58e-07,13;CL:0002077,6.80e-07,34|ontology_enrichment_development_v019=CL:0000357;2.49e-07;6!CL:0000114;2.49e-07;6|ontology_enrichment_disease=DOID:1749!7.25e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.97e-14!14;UBERON:0000158!1.97e-14!14;UBERON:0003124!4.80e-14!7;UBERON:0004119!3.65e-11!169;UBERON:0000925!3.65e-11!169;UBERON:0006595!3.65e-11!169;UBERON:0001987!4.27e-11!4;UBERON:0004340!4.27e-11!4;UBERON:0001949!8.61e-09!3;UBERON:0004815!1.04e-08!3;UBERON:0002031!1.04e-08!3;UBERON:0001004!2.55e-08!72;UBERON:0000161!3.14e-08!35;UBERON:0003100!5.68e-08!41;UBERON:0000478!1.20e-07!24;UBERON:0001911!3.08e-07!4;UBERON:0005333!3.08e-07!4;UBERON:0008425!3.08e-07!4;UBERON:0005311!3.08e-07!4;UBERON:0000166!8.33e-07!21;UBERON:0000995!9.32e-07!21|ontology_enrichment_uberon_v019=UBERON:0001911;8.50e-22;4!UBERON:0003124;3.88e-14;3!UBERON:0000920;3.88e-14;3!UBERON:0001708;9.98e-11;4!UBERON:0008895;9.98e-11;4!UBERON:0001987;2.72e-10;4!UBERON:0011159;9.36e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.44e-22,7;UBERON:0001911,5.34e-22,4;UBERON:0005333,5.34e-22,4;UBERON:0008425,5.34e-22,4;UBERON:0005311,5.34e-22,4;UBERON:0000920,3.64e-14,3;UBERON:0000076,2.66e-11,8;UBERON:0005631,2.72e-11,14;UBERON:0000158,2.72e-11,14;UBERON:0001708,9.99e-11,4;UBERON:0008895,9.99e-11,4;UBERON:0001987,1.95e-10,4;UBERON:0004340,1.95e-10,4;UBERON:0011159,9.36e-09,5;UBERON:0003100,6.93e-08,41;UBERON:0010188,1.96e-07,6;UBERON:0002539,1.96e-07,6;UBERON:0008816,1.96e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,4.02115889646523,1.29623823221941,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,4.70349958956807,2.55195175036296,2.86587272649115,1.74380363108377,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,1.38121483403844,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,2.47927373041467,2.69066094311149,0.382838137483752,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,3.50901275705111,0,6.92945208824225,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21479321..21479334,+ | |||
|id=chr18:21479321..21479334,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.37e-24!43;CL:0000066!4.83e-20!254;CL:0000223!7.52e-18!59;CL:0002368!3.12e-12!13;CL:0002251!1.65e-10!21;CL:0000349!3.65e-09!3;CL:0002577!3.65e-09!3;CL:0002621!8.61e-09!3;CL:0002328!1.04e-08!3;CL:0002159!2.01e-07!13;CL:0002327!3.08e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.50e-22;4!CL:0002541;3.88e-14;3!CL:0002166;5.37e-14;3!CL:0002231;1.02e-13;3!CL:0002577;2.06e-13;3!CL:0002159;2.68e-11;14!CL:0002336;1.10e-10;1!CL:0002261;1.10e-10;1!CL:0002170;1.10e-10;1!CL:0002076;5.43e-09;42!CL:0000349;2.69e-08;19!CL:0000240;2.49e-07;6!CL:0000311;2.49e-07;6!CL:0000079;2.49e-07;6!CL:0000237;2.49e-07;6!CL:0002368;3.73e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.34e-22,4;CL:0002541,3.64e-14,3;CL:0002166,5.37e-14,3;CL:0002231,1.02e-13,3;CL:0002577,1.32e-13,3;CL:0002159,2.95e-11,14;CL:0000066,1.07e-10,253;CL:0002336,1.61e-10,1;CL:0002261,1.61e-10,1;CL:0002170,1.61e-10,1;CL:0002076,2.52e-10,42;CL:0000349,2.31e-08,19;CL:0000223,2.80e-07,58;CL:0000240,2.87e-07,6;CL:0000311,2.87e-07,6;CL:0000079,2.87e-07,6;CL:0000237,2.87e-07,6;CL:0000036,2.87e-07,6;CL:0000357,2.87e-07,6;CL:0000114,2.87e-07,6;CL:0002368,3.58e-07,13;CL:0002077,6.80e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;2.49e-07;6!CL:0000114;2.49e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!7.25e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.97e-14!14;UBERON:0000158!1.97e-14!14;UBERON:0003124!4.80e-14!7;UBERON:0004119!3.65e-11!169;UBERON:0000925!3.65e-11!169;UBERON:0006595!3.65e-11!169;UBERON:0001987!4.27e-11!4;UBERON:0004340!4.27e-11!4;UBERON:0001949!8.61e-09!3;UBERON:0004815!1.04e-08!3;UBERON:0002031!1.04e-08!3;UBERON:0001004!2.55e-08!72;UBERON:0000161!3.14e-08!35;UBERON:0003100!5.68e-08!41;UBERON:0000478!1.20e-07!24;UBERON:0001911!3.08e-07!4;UBERON:0005333!3.08e-07!4;UBERON:0008425!3.08e-07!4;UBERON:0005311!3.08e-07!4;UBERON:0000166!8.33e-07!21;UBERON:0000995!9.32e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;8.50e-22;4!UBERON:0003124;3.88e-14;3!UBERON:0000920;3.88e-14;3!UBERON:0001708;9.98e-11;4!UBERON:0008895;9.98e-11;4!UBERON:0001987;2.72e-10;4!UBERON:0011159;9.36e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.44e-22,7;UBERON:0001911,5.34e-22,4;UBERON:0005333,5.34e-22,4;UBERON:0008425,5.34e-22,4;UBERON:0005311,5.34e-22,4;UBERON:0000920,3.64e-14,3;UBERON:0000076,2.66e-11,8;UBERON:0005631,2.72e-11,14;UBERON:0000158,2.72e-11,14;UBERON:0001708,9.99e-11,4;UBERON:0008895,9.99e-11,4;UBERON:0001987,1.95e-10,4;UBERON:0004340,1.95e-10,4;UBERON:0011159,9.36e-09,5;UBERON:0003100,6.93e-08,41;UBERON:0010188,1.96e-07,6;UBERON:0002539,1.96e-07,6;UBERON:0008816,1.96e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.773043412653187,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,4.02115889646523,1.29623823221941,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,4.70349958956807,2.55195175036296,2.86587272649115,1.74380363108377,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20810352485256,1.38121483403844,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,2.47927373041467,2.69066094311149,0.382838137483752,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,3.50901275705111,0,6.92945208824225,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.62164849248911,0,0,0,0,0,0,1.3746412112643,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,3.17605384544123,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21479321..21479334,+ | |||
}} |
Revision as of 17:01, 11 September 2013
Short description: | p@chr18:21479321..21479334, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21479321..21479334, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.34e-22 | 4 |
chorionic membrane mesenchymal stem cell | 3.64e-14 | 3 |
epithelial cell of Malassez | 5.37e-14 | 3 |
epithelial cell of prostate | 1.02e-13 | 3 |
placental epithelial cell | 1.32e-13 | 3 |
general ecto-epithelial cell | 2.95e-11 | 14 |
epithelial cell | 1.07e-10 | 253 |
buccal mucosa cell | 1.61e-10 | 1 |
endothelial cell of viscerocranial mucosa | 1.61e-10 | 1 |
keratinized cell of the oral mucosa | 1.61e-10 | 1 |
endo-epithelial cell | 2.52e-10 | 42 |
extraembryonic cell | 2.31e-08 | 19 |
endodermal cell | 2.80e-07 | 58 |
stratified squamous epithelial cell | 2.87e-07 | 6 |
keratin accumulating cell | 2.87e-07 | 6 |
stratified epithelial cell | 2.87e-07 | 6 |
keratinizing barrier epithelial cell | 2.87e-07 | 6 |
epithelial fate stem cell | 2.87e-07 | 6 |
stratified epithelial stem cell | 2.87e-07 | 6 |
surface ectodermal cell | 2.87e-07 | 6 |
respiratory epithelial cell | 3.58e-07 | 13 |
ecto-epithelial cell | 6.80e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.44e-22 | 7 |
mammary gland | 5.34e-22 | 4 |
mammary bud | 5.34e-22 | 4 |
mammary ridge | 5.34e-22 | 4 |
mammary placode | 5.34e-22 | 4 |
egg chorion | 3.64e-14 | 3 |
external ectoderm | 2.66e-11 | 8 |
extraembryonic membrane | 2.72e-11 | 14 |
membranous layer | 2.72e-11 | 14 |
jaw skeleton | 9.99e-11 | 4 |
splanchnocranium | 9.99e-11 | 4 |
placenta | 1.95e-10 | 4 |
allantois | 1.95e-10 | 4 |
primary subdivision of cranial skeletal system | 9.36e-09 | 5 |
female organism | 6.93e-08 | 41 |
protuberance | 1.96e-07 | 6 |
pharyngeal arch | 1.96e-07 | 6 |
embryonic head | 1.96e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.