FFCP PHASE1:Hg19::chr17:74049688..74049708,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6730|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11302|TSSclassifier=S|UniProt=B3KUU5|association_with_transcript=20bp_to_ENST00000542536_5end|coexpression_cluster_id=C68|description=CAGE_peak_6_at_SRP68_5end|id=chr17:74049688..74049708,-|ontology_enrichment_celltype=CL:0000066!1.58e-15!254;CL:0002076!2.74e-09!43;CL:0000223!1.73e-07!59;CL:1000449!2.68e-07!16|ontology_enrichment_celltype_v019=CL:0000575;2.05e-20;2!CL:0000349;1.38e-12;19!CL:0002252;3.24e-11;1!CL:0002537;6.87e-09;5!CL:0002681;1.26e-07;12!CL:0002584;1.26e-07;12|ontology_enrichment_celltype_v019_2=CL:0000575,2.05e-20,2;CL:0000349,1.29e-12,19;CL:0002252,3.08e-11,1;CL:0002537,6.87e-09,5;CL:0002681,1.53e-07,12;CL:0002584,1.53e-07,12;CL:0000066,5.16e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4929;1.28e-19;2|ontology_enrichment_disease_v019_2=DOID:4929,1.55e-19,2|ontology_enrichment_uberon=UBERON:0005631!4.67e-16!14;UBERON:0000158!4.67e-16!14;UBERON:0004119!1.84e-10!169;UBERON:0000925!1.84e-10!169;UBERON:0006595!1.84e-10!169;UBERON:0003124!6.11e-10!7;UBERON:0000058!2.69e-09!26;UBERON:0000478!3.09e-08!24;UBERON:0006554!7.39e-08!44;UBERON:0000305!8.04e-08!7;UBERON:0000488!8.27e-08!4;UBERON:0000064!1.34e-07!219;UBERON:0001008!1.35e-07!45;UBERON:0004211!2.68e-07!16;UBERON:0001285!2.68e-07!16;UBERON:0007684!2.68e-07!16;UBERON:0003220!2.68e-07!16;UBERON:0004208!2.68e-07!16;UBERON:0001723!5.98e-07!3;UBERON:0001033!5.98e-07!3;UBERON:0010056!5.98e-07!3;UBERON:0001444!8.47e-07!48;UBERON:0006555!8.94e-07!17;UBERON:0005103!8.94e-07!17;UBERON:0000083!8.94e-07!17;UBERON:0009201!8.94e-07!17;UBERON:0004819!8.94e-07!17;UBERON:0006553!8.94e-07!17;UBERON:0003074!8.94e-07!17;UBERON:0003060!8.94e-07!17;UBERON:0004871!9.04e-07!8;UBERON:0000020!9.24e-07!23|ontology_enrichment_uberon_v019=UBERON:0005631;8.52e-16;10!UBERON:0000158;8.52e-16;10!UBERON:0000305;4.21e-13;7!UBERON:0002372;1.10e-10;1!UBERON:0004913;1.10e-10;1!UBERON:0003703;1.10e-10;1!UBERON:0001961;1.10e-10;1!UBERON:0001744;1.10e-10;1!UBERON:0001042;1.10e-10;1!UBERON:0001735;1.10e-10;1!UBERON:0001174;1.10e-10;1!UBERON:0004914;1.10e-10;1!UBERON:0000964;1.10e-10;4!UBERON:0010409;1.10e-10;4!UBERON:0002394;1.73e-10;4!UBERON:0003928;1.73e-10;4!UBERON:0000478;6.14e-10;24!UBERON:0001225;1.26e-07;12!UBERON:0008987;1.26e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.75e-17,14;UBERON:0000158,3.75e-17,14;UBERON:0000305,4.58e-13,7;UBERON:0004871,1.68e-11,8;UBERON:0004913,9.05e-11,1;UBERON:0003703,9.05e-11,1;UBERON:0001174,9.05e-11,1;UBERON:0004914,9.05e-11,1;UBERON:0002372,9.97e-11,1;UBERON:0001961,9.97e-11,1;UBERON:0001744,9.97e-11,1;UBERON:0001735,9.97e-11,1;UBERON:0000964,1.10e-10,4;UBERON:0010409,1.10e-10,4;UBERON:0004348,1.10e-10,4;UBERON:0005427,1.10e-10,4;UBERON:0000478,5.86e-10,24;UBERON:0000058,3.46e-08,19;UBERON:0001225,1.53e-07,12;UBERON:0008987,1.53e-07,12;UBERON:0002394,2.78e-07,6;UBERON:0003928,2.78e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.614843499851882,0,2.91436230634034,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.276242966807689,0,0,0,0,0.15403067420883,0.784349769176855,0,0.527758144464379,0,0,0.863663664408557,0,1.08378575017541,0,1.01950509218015,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,7.1623345421307,0.296964680832639,12.2864280839693,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,3.40140231883657,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0.1086473719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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11302 | |||
|TSSclassifier=S | |||
|UniProt=B3KUU5 | |||
|association_with_transcript=20bp_to_ENST00000542536_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_6_at_SRP68_5end | |||
|id=chr17:74049688..74049708,- | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-15!254;CL:0002076!2.74e-09!43;CL:0000223!1.73e-07!59;CL:1000449!2.68e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.05e-20;2!CL:0000349;1.38e-12;19!CL:0002252;3.24e-11;1!CL:0002537;6.87e-09;5!CL:0002681;1.26e-07;12!CL:0002584;1.26e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.05e-20,2;CL:0000349,1.29e-12,19;CL:0002252,3.08e-11,1;CL:0002537,6.87e-09,5;CL:0002681,1.53e-07,12;CL:0002584,1.53e-07,12;CL:0000066,5.16e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.28e-19;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.55e-19,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.67e-16!14;UBERON:0000158!4.67e-16!14;UBERON:0004119!1.84e-10!169;UBERON:0000925!1.84e-10!169;UBERON:0006595!1.84e-10!169;UBERON:0003124!6.11e-10!7;UBERON:0000058!2.69e-09!26;UBERON:0000478!3.09e-08!24;UBERON:0006554!7.39e-08!44;UBERON:0000305!8.04e-08!7;UBERON:0000488!8.27e-08!4;UBERON:0000064!1.34e-07!219;UBERON:0001008!1.35e-07!45;UBERON:0004211!2.68e-07!16;UBERON:0001285!2.68e-07!16;UBERON:0007684!2.68e-07!16;UBERON:0003220!2.68e-07!16;UBERON:0004208!2.68e-07!16;UBERON:0001723!5.98e-07!3;UBERON:0001033!5.98e-07!3;UBERON:0010056!5.98e-07!3;UBERON:0001444!8.47e-07!48;UBERON:0006555!8.94e-07!17;UBERON:0005103!8.94e-07!17;UBERON:0000083!8.94e-07!17;UBERON:0009201!8.94e-07!17;UBERON:0004819!8.94e-07!17;UBERON:0006553!8.94e-07!17;UBERON:0003074!8.94e-07!17;UBERON:0003060!8.94e-07!17;UBERON:0004871!9.04e-07!8;UBERON:0000020!9.24e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.52e-16;10!UBERON:0000158;8.52e-16;10!UBERON:0000305;4.21e-13;7!UBERON:0002372;1.10e-10;1!UBERON:0004913;1.10e-10;1!UBERON:0003703;1.10e-10;1!UBERON:0001961;1.10e-10;1!UBERON:0001744;1.10e-10;1!UBERON:0001042;1.10e-10;1!UBERON:0001735;1.10e-10;1!UBERON:0001174;1.10e-10;1!UBERON:0004914;1.10e-10;1!UBERON:0000964;1.10e-10;4!UBERON:0010409;1.10e-10;4!UBERON:0002394;1.73e-10;4!UBERON:0003928;1.73e-10;4!UBERON:0000478;6.14e-10;24!UBERON:0001225;1.26e-07;12!UBERON:0008987;1.26e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.75e-17,14;UBERON:0000158,3.75e-17,14;UBERON:0000305,4.58e-13,7;UBERON:0004871,1.68e-11,8;UBERON:0004913,9.05e-11,1;UBERON:0003703,9.05e-11,1;UBERON:0001174,9.05e-11,1;UBERON:0004914,9.05e-11,1;UBERON:0002372,9.97e-11,1;UBERON:0001961,9.97e-11,1;UBERON:0001744,9.97e-11,1;UBERON:0001735,9.97e-11,1;UBERON:0000964,1.10e-10,4;UBERON:0010409,1.10e-10,4;UBERON:0004348,1.10e-10,4;UBERON:0005427,1.10e-10,4;UBERON:0000478,5.86e-10,24;UBERON:0000058,3.46e-08,19;UBERON:0001225,1.53e-07,12;UBERON:0008987,1.53e-07,12;UBERON:0002394,2.78e-07,6;UBERON:0003928,2.78e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,1.09220686065086,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.614843499851882,0,2.91436230634034,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.370353780634118,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.276242966807689,0,0,0,0,0.15403067420883,0.784349769176855,0,0.527758144464379,0,0,0.863663664408557,0,1.08378575017541,0,1.01950509218015,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,7.1623345421307,0.296964680832639,12.2864280839693,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,3.40140231883657,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0.108647371922008,3.82801391678303,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0.313932918407225,0,3.9845336444171,0,0,0.587954384486266,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,0.195551382734803,0,0,0,0.432271251462318,0,0,0.14405479798815,0,3.77110455386873,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0,0.577628330751691,0,0,0.198916222116275,0,0,0,0,0.163771917510097,1.33070477595341,0,0,0,0,0,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.975343399858155,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,1.20929600728513,0,0.435433495793923,0.684466602170562,1.21233695426258,0.143444410785353,0,0,0,0,1.07790242527904,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@SRP68 | |||
}} |
Revision as of 15:45, 11 September 2013
Short description: | p6@SRP68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SRP68_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 20bp_to_ENST00000542536_5end |
EntrezGene: | SRP68 |
HGNC: | 11302 |
UniProt: | B3KUU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.05e-20 | 2 |
extraembryonic cell | 1.29e-12 | 19 |
epithelial cell of esophagus | 3.08e-11 | 1 |
amnion mesenchymal stem cell | 6.87e-09 | 5 |
kidney cortical cell | 1.53e-07 | 12 |
renal cortical epithelial cell | 1.53e-07 | 12 |
epithelial cell | 5.16e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.75e-17 | 14 |
membranous layer | 3.75e-17 | 14 |
amnion | 4.58e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.68e-11 | 8 |
hepatopancreatic ampulla | 9.05e-11 | 1 |
extrahepatic bile duct | 9.05e-11 | 1 |
common bile duct | 9.05e-11 | 1 |
duodenal papilla | 9.05e-11 | 1 |
tonsil | 9.97e-11 | 1 |
mucosa-associated lymphoid tissue | 9.97e-11 | 1 |
lymphoid tissue | 9.97e-11 | 1 |
tonsillar ring | 9.97e-11 | 1 |
cornea | 1.10e-10 | 4 |
eye surface | 1.10e-10 | 4 |
optic eminence | 1.10e-10 | 4 |
corneal primordium | 1.10e-10 | 4 |
extraembryonic structure | 5.86e-10 | 24 |
duct | 3.46e-08 | 19 |
cortex of kidney | 1.53e-07 | 12 |
renal parenchyma | 1.53e-07 | 12 |
bile duct | 2.78e-07 | 6 |
digestive system duct | 2.78e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.55e-19 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.