FFCP PHASE1:Hg19::chr17:55601662..55601678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C976|description=CAGE_peak_at_chr17:55601662..55601678,+|id=chr17:55601662..55601678,+|ontology_enrichment_celltype=CL:0002586!2.74e-08!3|ontology_enrichment_celltype_v019=CL:0000785;1.84e-14;1!CL:0000819;1.84e-14;1|ontology_enrichment_celltype_v019_2=CL:0000819,1.07e-14,1;CL:0000785,5.37e-08,2;CL:0000955,5.37e-08,2;CL:0000818,5.37e-08,2;CL:0000954,5.37e-08,2;CL:0000816,5.37e-08,2|ontology_enrichment_development_v019=CL:0000954;7.03e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;1.84e-14;1!DOID:8675;1.84e-14;1|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-14,1;DOID:8675,1.07e-14,1|ontology_enrichment_uberon=UBERON:0000966!1.57e-12!5;UBERON:0005388!1.57e-12!5;UBERON:0001802!1.57e-12!5;UBERON:0000073!7.45e-11!94;UBERON:0001016!7.45e-11!94;UBERON:0005743!1.44e-10!86;UBERON:0000153!4.17e-10!129;UBERON:0007811!4.17e-10!129;UBERON:0002346!6.81e-09!90;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000924!1.26e-08!173;UBERON:0006601!1.26e-08!173;UBERON:0001896!1.72e-08!3;UBERON:0005290!1.72e-08!3;UBERON:0010096!1.72e-08!3;UBERON:0004121!2.35e-08!169;UBERON:0001781!2.74e-08!3;UBERON:0001782!2.74e-08!3;UBERON:0005424!2.74e-08!3;UBERON:0000955!1.44e-07!69;UBERON:0006238!1.44e-07!69;UBERON:0007023!2.06e-07!115;UBERON:0001017!2.39e-07!82;UBERON:0000033!6.09e-07!123|ontology_enrichment_uberon_v019=UBERON:0002784;3.16e-30;4!UBERON:0001905;2.09e-27;2!UBERON:0002757;2.09e-27;2!UBERON:0010134;2.09e-27;2!UBERON:0005408;2.09e-27;2!UBERON:0001899;2.09e-27;2!UBERON:0001896;1.94e-18;3!UBERON:0005290;1.94e-18;3!UBERON:0001894;1.39e-17;7!UBERON:0003296;3.15e-14;4!UBERON:0010133;3.15e-14;4!UBERON:0002298;1.06e-09;6!UBERON:0003127;7.03e-08;2!UBERON:0001897;7.03e-08;2!UBERON:0010225;7.03e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002784,2.35e-30,4;UBERON:0001905,2.09e-27,2;UBERON:0002757,2.09e-27,2;UBERON:0010134,2.09e-27,2;UBERON:0005408,2.09e-27,2;UBERON:0001899,2.09e-27,2;UBERON:0001896,2.76e-18,3;UBERON:0005290,2.76e-18,3;UBERON:0010096,2.76e-18,3;UBERON:0001894,1.17e-17,7;UBERON:0006222,1.17e-17,7;UBERON:0003296,3.16e-14,4;UBERON:0010133,3.16e-14,4;UBERON:0002298,1.26e-09,6;UBERON:0000955,9.71e-09,68;UBERON:0006238,9.71e-09,68;UBERON:0001897,5.74e-08,2;UBERON:0010225,5.74e-08,2;UBERON:0003127,8.04e-08,2;UBERON:0001017,2.81e-07,81|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.46480320348181,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,42.8584578499827,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.67401132980677,0,0,1.82454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.41483874589699,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.22021956690538,0.310482014706917,10.9295421599622,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.71635536432595,0,0,0.176689145945881,0,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C976 | |||
|description=CAGE_peak_at_chr17:55601662..55601678,+ | |||
|id=chr17:55601662..55601678,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.74e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.84e-14;1!CL:0000819;1.84e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.07e-14,1;CL:0000785,5.37e-08,2;CL:0000955,5.37e-08,2;CL:0000818,5.37e-08,2;CL:0000954,5.37e-08,2;CL:0000816,5.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;7.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.84e-14;1!DOID:8675;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-14,1;DOID:8675,1.07e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.57e-12!5;UBERON:0005388!1.57e-12!5;UBERON:0001802!1.57e-12!5;UBERON:0000073!7.45e-11!94;UBERON:0001016!7.45e-11!94;UBERON:0005743!1.44e-10!86;UBERON:0000153!4.17e-10!129;UBERON:0007811!4.17e-10!129;UBERON:0002346!6.81e-09!90;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000924!1.26e-08!173;UBERON:0006601!1.26e-08!173;UBERON:0001896!1.72e-08!3;UBERON:0005290!1.72e-08!3;UBERON:0010096!1.72e-08!3;UBERON:0004121!2.35e-08!169;UBERON:0001781!2.74e-08!3;UBERON:0001782!2.74e-08!3;UBERON:0005424!2.74e-08!3;UBERON:0000955!1.44e-07!69;UBERON:0006238!1.44e-07!69;UBERON:0007023!2.06e-07!115;UBERON:0001017!2.39e-07!82;UBERON:0000033!6.09e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.16e-30;4!UBERON:0001905;2.09e-27;2!UBERON:0002757;2.09e-27;2!UBERON:0010134;2.09e-27;2!UBERON:0005408;2.09e-27;2!UBERON:0001899;2.09e-27;2!UBERON:0001896;1.94e-18;3!UBERON:0005290;1.94e-18;3!UBERON:0001894;1.39e-17;7!UBERON:0003296;3.15e-14;4!UBERON:0010133;3.15e-14;4!UBERON:0002298;1.06e-09;6!UBERON:0003127;7.03e-08;2!UBERON:0001897;7.03e-08;2!UBERON:0010225;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,2.35e-30,4;UBERON:0001905,2.09e-27,2;UBERON:0002757,2.09e-27,2;UBERON:0010134,2.09e-27,2;UBERON:0005408,2.09e-27,2;UBERON:0001899,2.09e-27,2;UBERON:0001896,2.76e-18,3;UBERON:0005290,2.76e-18,3;UBERON:0010096,2.76e-18,3;UBERON:0001894,1.17e-17,7;UBERON:0006222,1.17e-17,7;UBERON:0003296,3.16e-14,4;UBERON:0010133,3.16e-14,4;UBERON:0002298,1.26e-09,6;UBERON:0000955,9.71e-09,68;UBERON:0006238,9.71e-09,68;UBERON:0001897,5.74e-08,2;UBERON:0010225,5.74e-08,2;UBERON:0003127,8.04e-08,2;UBERON:0001017,2.81e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.46480320348181,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,42.8584578499827,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.67401132980677,0,0,1.82454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.41483874589699,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,1.14681839138014,1.22021956690538,0.310482014706917,10.9295421599622,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.71635536432595,0,0,0.176689145945881,0,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0.175871244359621,0,2.14280734351315,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,29.7065590057526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,10.1636178787685,0,0,0,0,0,0.22589216407792,61.1269273104586,0.452888530700021,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,1.65833887891756,0,0.426467963801962,0.952257725854961,0,0.0620747142958579,0,0,0,0.217716747896961,0.684466602170562,0,1.14755528628282,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:55601662..55601678,+ | |||
}} |
Revision as of 14:44, 11 September 2013
Short description: | p@chr17:55601662..55601678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:55601662..55601678, + |
Coexpression cluster: | C976_anaplastic_small_retinoblastoma_gastrointestinal_merkel_neuroblastoma_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.07e-14 | 1 |
mature B cell | 5.37e-08 | 2 |
pre-B-II cell | 5.37e-08 | 2 |
transitional stage B cell | 5.37e-08 | 2 |
small pre-B-II cell | 5.37e-08 | 2 |
immature B cell | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 2.35e-30 | 4 |
pineal body | 2.09e-27 | 2 |
regional part of epithalamus | 2.09e-27 | 2 |
secretory circumventricular organ | 2.09e-27 | 2 |
circumventricular organ | 2.09e-27 | 2 |
epithalamus | 2.09e-27 | 2 |
medulla oblongata | 2.76e-18 | 3 |
myelencephalon | 2.76e-18 | 3 |
future myelencephalon | 2.76e-18 | 3 |
diencephalon | 1.17e-17 | 7 |
future diencephalon | 1.17e-17 | 7 |
gland of diencephalon | 3.16e-14 | 4 |
neuroendocrine gland | 3.16e-14 | 4 |
brainstem | 1.26e-09 | 6 |
brain | 9.71e-09 | 68 |
future brain | 9.71e-09 | 68 |
dorsal plus ventral thalamus | 5.74e-08 | 2 |
thalamic complex | 5.74e-08 | 2 |
open tracheal system trachea | 8.04e-08 | 2 |
central nervous system | 2.81e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.07e-14 | 1 |
lymphosarcoma | 1.07e-14 | 1 |
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