FFCP PHASE1:Hg19::chr17:47210085..47210098,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=124872|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24136|TSSclassifier=S|UniProt=B4DZE4,Q8NHY0|association_with_transcript=-32bp_to_ENST00000393354,NM_001159387,uc010wlu.1_5end|coexpression_cluster_id=C542|description=CAGE_peak_2_at_B4GALNT2_5end|id=chr17:47210085..47210098,+|ontology_enrichment_celltype=CL:0000066!1.56e-12!254;CL:0002076!2.10e-09!43;CL:0002231!4.23e-08!3;CL:1000497!1.35e-07!18;CL:0002518!1.35e-07!18;CL:0000223!6.25e-07!59|ontology_enrichment_celltype_v019=CL:0000167;3.24e-10;1!CL:0000164;3.24e-10;1!CL:0000502;3.24e-10;1!CL:0000172;3.24e-10;1!CL:0000173;3.24e-10;1!CL:0002379;6.91e-10;1|ontology_enrichment_celltype_v019_2=CL:0000167,3.40e-10,1;CL:0000164,3.40e-10,1;CL:0000502,3.40e-10,1;CL:0000172,3.40e-10,1;CL:0000173,3.40e-10,1;CL:0002351,3.40e-10,1;CL:0002379,5.30e-10,1|ontology_enrichment_development_v019=UBERON:0001045;2.37e-10;1!CL:0002351;3.24e-10;1!UBERON:0007123;6.88e-08;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3347;3.24e-10;1!DOID:4430;3.24e-10;1!DOID:3620;6.91e-10;1!DOID:3565;6.91e-10;1|ontology_enrichment_disease_v019_2=DOID:3347,2.84e-10,1;DOID:4430,3.40e-10,1;DOID:3620,5.30e-10,1;DOID:3565,5.30e-10,1|ontology_enrichment_uberon=UBERON:0006554!6.38e-14!44;UBERON:0001008!1.65e-13!45;UBERON:0004119!6.07e-13!169;UBERON:0000925!6.07e-13!169;UBERON:0006595!6.07e-13!169;UBERON:0001155!3.94e-10!9;UBERON:0003064!7.02e-10!37;UBERON:0001007!1.33e-09!155;UBERON:0001555!1.33e-09!155;UBERON:0007026!1.33e-09!155;UBERON:0001046!2.88e-09!19;UBERON:0000489!1.29e-08!32;UBERON:0000059!3.88e-08!11;UBERON:0000162!5.04e-08!14;UBERON:0001353!5.04e-08!14;UBERON:0000163!5.04e-08!14;UBERON:0006866!5.04e-08!14;UBERON:0000164!5.04e-08!14;UBERON:0000931!5.04e-08!14;UBERON:0002367!8.07e-08!11;UBERON:0010147!8.07e-08!11;UBERON:0009846!8.07e-08!11;UBERON:0003353!8.07e-08!11;UBERON:0004902!8.07e-08!11;UBERON:0003820!8.07e-08!11;UBERON:0009847!8.07e-08!11;UBERON:0004921!1.07e-07!129;UBERON:0004185!1.07e-07!129;UBERON:0000160!1.86e-07!27;UBERON:0004122!2.05e-07!15;UBERON:0000481!2.05e-07!347;UBERON:0002113!2.33e-07!27;UBERON:0003918!2.33e-07!27;UBERON:0005095!2.33e-07!27;UBERON:0007687!2.33e-07!27;UBERON:0005911!4.13e-07!82;UBERON:0003937!4.20e-07!12;UBERON:0005399!4.20e-07!12|ontology_enrichment_uberon_v019=UBERON:0001154;2.37e-10;1!UBERON:0001153;2.37e-10;1!UBERON:0009854;2.37e-10;1!UBERON:0001155;1.92e-09;9!UBERON:0000160;4.43e-08;17!UBERON:0002046;6.88e-08;5!UBERON:0000059;8.23e-08;11!UBERON:0002367;1.53e-07;11!UBERON:0010147;1.53e-07;11!UBERON:0003937;5.96e-07;12!UBERON:0005399;5.96e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.16e-10,1;UBERON:0001153,2.16e-10,1;UBERON:0001045,2.16e-10,1;UBERON:0001155,1.57e-09,9;UBERON:0000160,4.00e-08,17;UBERON:0002046,5.69e-08,5;UBERON:0004117,5.69e-08,5;UBERON:0007689,5.69e-08,5;UBERON:0007123,5.69e-08,5;UBERON:0003091,5.69e-08,5;UBERON:0000059,6.99e-08,11;UBERON:0002367,1.84e-07,11;UBERON:0010147,1.84e-07,11;UBERON:0009846,1.84e-07,11;UBERON:0003353,1.84e-07,11;UBERON:0004902,1.84e-07,11;UBERON:0003820,1.84e-07,11;UBERON:0009847,1.84e-07,11;UBERON:0001046,1.98e-07,19;UBERON:0003937,7.04e-07,12;UBERON:0005399,7.04e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.20303882181971,0.0920809889358963,1.03333003348146,0.364182336013434,0,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0.510450849978337,1.51736671283325,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97311047956066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787139999965761,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,1.25481369850743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16323280815914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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=124872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24136 | |||
|TSSclassifier=S | |||
|UniProt=B4DZE4,Q8NHY0 | |||
|association_with_transcript=-32bp_to_ENST00000393354,NM_001159387,uc010wlu.1_5end | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_2_at_B4GALNT2_5end | |||
|id=chr17:47210085..47210098,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-12!254;CL:0002076!2.10e-09!43;CL:0002231!4.23e-08!3;CL:1000497!1.35e-07!18;CL:0002518!1.35e-07!18;CL:0000223!6.25e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.24e-10;1!CL:0000164;3.24e-10;1!CL:0000502;3.24e-10;1!CL:0000172;3.24e-10;1!CL:0000173;3.24e-10;1!CL:0002379;6.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.40e-10,1;CL:0000164,3.40e-10,1;CL:0000502,3.40e-10,1;CL:0000172,3.40e-10,1;CL:0000173,3.40e-10,1;CL:0002351,3.40e-10,1;CL:0002379,5.30e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.37e-10;1!CL:0002351;3.24e-10;1!UBERON:0007123;6.88e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;3.24e-10;1!DOID:4430;3.24e-10;1!DOID:3620;6.91e-10;1!DOID:3565;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.84e-10,1;DOID:4430,3.40e-10,1;DOID:3620,5.30e-10,1;DOID:3565,5.30e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0006554!6.38e-14!44;UBERON:0001008!1.65e-13!45;UBERON:0004119!6.07e-13!169;UBERON:0000925!6.07e-13!169;UBERON:0006595!6.07e-13!169;UBERON:0001155!3.94e-10!9;UBERON:0003064!7.02e-10!37;UBERON:0001007!1.33e-09!155;UBERON:0001555!1.33e-09!155;UBERON:0007026!1.33e-09!155;UBERON:0001046!2.88e-09!19;UBERON:0000489!1.29e-08!32;UBERON:0000059!3.88e-08!11;UBERON:0000162!5.04e-08!14;UBERON:0001353!5.04e-08!14;UBERON:0000163!5.04e-08!14;UBERON:0006866!5.04e-08!14;UBERON:0000164!5.04e-08!14;UBERON:0000931!5.04e-08!14;UBERON:0002367!8.07e-08!11;UBERON:0010147!8.07e-08!11;UBERON:0009846!8.07e-08!11;UBERON:0003353!8.07e-08!11;UBERON:0004902!8.07e-08!11;UBERON:0003820!8.07e-08!11;UBERON:0009847!8.07e-08!11;UBERON:0004921!1.07e-07!129;UBERON:0004185!1.07e-07!129;UBERON:0000160!1.86e-07!27;UBERON:0004122!2.05e-07!15;UBERON:0000481!2.05e-07!347;UBERON:0002113!2.33e-07!27;UBERON:0003918!2.33e-07!27;UBERON:0005095!2.33e-07!27;UBERON:0007687!2.33e-07!27;UBERON:0005911!4.13e-07!82;UBERON:0003937!4.20e-07!12;UBERON:0005399!4.20e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.37e-10;1!UBERON:0001153;2.37e-10;1!UBERON:0009854;2.37e-10;1!UBERON:0001155;1.92e-09;9!UBERON:0000160;4.43e-08;17!UBERON:0002046;6.88e-08;5!UBERON:0000059;8.23e-08;11!UBERON:0002367;1.53e-07;11!UBERON:0010147;1.53e-07;11!UBERON:0003937;5.96e-07;12!UBERON:0005399;5.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.16e-10,1;UBERON:0001153,2.16e-10,1;UBERON:0001045,2.16e-10,1;UBERON:0001155,1.57e-09,9;UBERON:0000160,4.00e-08,17;UBERON:0002046,5.69e-08,5;UBERON:0004117,5.69e-08,5;UBERON:0007689,5.69e-08,5;UBERON:0007123,5.69e-08,5;UBERON:0003091,5.69e-08,5;UBERON:0000059,6.99e-08,11;UBERON:0002367,1.84e-07,11;UBERON:0010147,1.84e-07,11;UBERON:0009846,1.84e-07,11;UBERON:0003353,1.84e-07,11;UBERON:0004902,1.84e-07,11;UBERON:0003820,1.84e-07,11;UBERON:0009847,1.84e-07,11;UBERON:0001046,1.98e-07,19;UBERON:0003937,7.04e-07,12;UBERON:0005399,7.04e-07,12 | |||
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|short_description=p2@B4GALNT2 | |||
}} |
Revision as of 14:19, 11 September 2013
Short description: | p2@B4GALNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B4GALNT2_5end |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | -32bp_to_ENST00000393354, NM_001159387, uc010wlu.1_5end |
EntrezGene: | B4GALNT2 |
HGNC: | 24136 |
UniProt: | B4DZE4Q8NHY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.40e-10 | 1 |
enteroendocrine cell | 3.40e-10 | 1 |
type D enteroendocrine cell | 3.40e-10 | 1 |
somatostatin secreting cell | 3.40e-10 | 1 |
pancreatic D cell | 3.40e-10 | 1 |
progenitor cell of endocrine pancreas | 3.40e-10 | 1 |
meningothelial cell | 5.30e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.16e-10 | 1 |
caecum | 2.16e-10 | 1 |
midgut | 2.16e-10 | 1 |
colon | 1.57e-09 | 9 |
intestine | 4.00e-08 | 17 |
thyroid gland | 5.69e-08 | 5 |
pharyngeal pouch | 5.69e-08 | 5 |
thyroid diverticulum | 5.69e-08 | 5 |
pharyngeal pouch 2 | 5.69e-08 | 5 |
thyroid primordium | 5.69e-08 | 5 |
large intestine | 6.99e-08 | 11 |
prostate gland | 1.84e-07 | 11 |
male accessory sex gland | 1.84e-07 | 11 |
embryonic cloacal epithelium | 1.84e-07 | 11 |
epithelium of hindgut | 1.84e-07 | 11 |
urogenital sinus epithelium | 1.84e-07 | 11 |
prostate bud | 1.84e-07 | 11 |
prostate field | 1.84e-07 | 11 |
hindgut | 1.98e-07 | 19 |
sex gland | 7.04e-07 | 12 |
male reproductive gland | 7.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.84e-10 | 1 |
somatostatinoma | 3.40e-10 | 1 |
central nervous system cancer | 5.30e-10 | 1 |
meningioma | 5.30e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.