FFCP PHASE1:Hg19::chr17:4487295..4487307,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=342527|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24764|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000338859_5end|coexpression_cluster_id=C31|description=CAGE_peak_2_at_SMTNL2_5end|id=chr17:4487295..4487307,+|ontology_enrichment_celltype=CL:0002575!7.31e-08!2;CL:0002563!9.39e-08!4;CL:0002253!1.56e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010226;5.13e-23;1!UBERON:0008814;2.07e-12;2!UBERON:0010056;2.07e-12;2!UBERON:0003104;5.81e-07;31|ontology_enrichment_disease=DOID:114!5.98e-08!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.68e-12!115;UBERON:0001630!2.83e-08!2;UBERON:0005090!2.83e-08!2;UBERON:0000341!3.85e-08!2;UBERON:0001052!5.58e-08!4;UBERON:0001242!9.39e-08!4;UBERON:0001262!9.39e-08!4;UBERON:0004786!9.39e-08!4;UBERON:0004808!9.39e-08!4;UBERON:0001277!9.39e-08!4;UBERON:0003103!1.93e-07!69;UBERON:0007100!9.67e-07!27|ontology_enrichment_uberon_v019=UBERON:0005090;5.00e-45;2!UBERON:0001630;5.00e-45;2!UBERON:0000341;3.72e-44;2!UBERON:0001723;1.58e-30;3!UBERON:0001033;1.58e-30;3!UBERON:0001389;1.19e-23;1!UBERON:0000026;1.19e-23;1!UBERON:0008784;1.19e-23;1!UBERON:0006058;1.19e-23;1!UBERON:0003663;1.19e-23;1!UBERON:0004256;1.19e-23;1!UBERON:0004708;1.19e-23;1!UBERON:0002101;1.19e-23;1!UBERON:0004709;1.19e-23;1!UBERON:0002529;1.19e-23;1!UBERON:0010538;1.19e-23;1!UBERON:0003661;1.19e-23;1!UBERON:0010890;1.19e-23;1!UBERON:0002471;1.19e-23;1!UBERON:0001383;1.19e-23;1!UBERON:0010758;1.19e-23;1!UBERON:0010707;1.19e-23;1!UBERON:0000978;1.19e-23;1!UBERON:0002103;1.19e-23;1!UBERON:0001665;1.19e-23;1!UBERON:0003823;1.19e-23;1!UBERON:0000154;1.19e-23;1!UBERON:0010709;1.19e-23;1!UBERON:0002426;2.93e-23;1!UBERON:0003831;2.93e-23;1!UBERON:0003898;2.93e-23;1!UBERON:0004830;2.93e-23;1!UBERON:0003830;2.93e-23;1!UBERON:0005175;2.93e-23;1!UBERON:0001774;2.93e-23;1!UBERON:0001103;2.93e-23;1!UBERON:0002084;5.13e-23;1!UBERON:0002082;5.13e-23;1!UBERON:0001134;1.67e-22;16!UBERON:0002036;1.67e-22;16!UBERON:0000974;1.76e-15;6!UBERON:0002385;3.19e-12;31!UBERON:0001015;3.19e-12;31!UBERON:0000383;3.19e-12;31!UBERON:0004151;1.40e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0005090,5.00e-45,2;UBERON:0001630,5.00e-45,2;UBERON:0000341,3.72e-44,2;UBERON:0001723,1.47e-30,3;UBERON:0001033,1.47e-30,3;UBERON:0010056,1.47e-30,3;UBERON:0005418,1.34e-23,1;UBERON:0001389,1.34e-23,1;UBERON:0000026,1.34e-23,1;UBERON:0008784,1.34e-23,1;UBERON:0006058,1.34e-23,1;UBERON:0003663,1.34e-23,1;UBERON:0004256,1.34e-23,1;UBERON:0004708,1.34e-23,1;UBERON:0002101,1.34e-23,1;UBERON:0004709,1.34e-23,1;UBERON:0002529,1.34e-23,1;UBERON:0010538,1.34e-23,1;UBERON:0003661,1.34e-23,1;UBERON:0010890,1.34e-23,1;UBERON:0002471,1.34e-23,1;UBERON:0001383,1.34e-23,1;UBERON:0004357,1.34e-23,1;UBERON:0004347,1.34e-23,1;UBERON:0005420,1.34e-23,1;UBERON:0005732,1.34e-23,1;UBERON:0010758,1.34e-23,1;UBERON:0010707,1.34e-23,1;UBERON:0000978,1.34e-23,1;UBERON:0002103,1.34e-23,1;UBERON:0001665,1.34e-23,1;UBERON:0003823,1.34e-23,1;UBERON:0000154,1.34e-23,1;UBERON:0010709,1.34e-23,1;UBERON:0005733,1.34e-23,1;UBERON:0005730,1.34e-23,1;UBERON:0002426,2.62e-23,1;UBERON:0003831,2.62e-23,1;UBERON:0003898,2.62e-23,1;UBERON:0004830,2.62e-23,1;UBERON:0003830,2.62e-23,1;UBERON:0005175,2.62e-23,1;UBERON:0001774,2.62e-23,1;UBERON:0001103,2.62e-23,1;UBERON:0010084,2.62e-23,1;UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0001042,6.78e-10,10;UBERON:0009145,6.78e-10,10;UBERON:0000974,1.10e-09,10;UBERON:0006562,4.43e-09,11;UBERON:0004151,1.40e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=342527 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24764 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000338859_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_2_at_SMTNL2_5end | |||
|id=chr17:4487295..4487307,+ | |||
|ontology_enrichment_celltype=CL:0002575!7.31e-08!2;CL:0002563!9.39e-08!4;CL:0002253!1.56e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.13e-23;1!UBERON:0008814;2.07e-12;2!UBERON:0010056;2.07e-12;2!UBERON:0003104;5.81e-07;31 | |||
|ontology_enrichment_disease=DOID:114!5.98e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-12!115;UBERON:0001630!2.83e-08!2;UBERON:0005090!2.83e-08!2;UBERON:0000341!3.85e-08!2;UBERON:0001052!5.58e-08!4;UBERON:0001242!9.39e-08!4;UBERON:0001262!9.39e-08!4;UBERON:0004786!9.39e-08!4;UBERON:0004808!9.39e-08!4;UBERON:0001277!9.39e-08!4;UBERON:0003103!1.93e-07!69;UBERON:0007100!9.67e-07!27 | |||
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|short_description=p2@SMTNL2 | |||
}} |
Revision as of 14:07, 11 September 2013
Short description: | p2@SMTNL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SMTNL2_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 1bp_to_ENST00000338859_5end |
EntrezGene: | SMTNL2 |
HGNC: | 24764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.