FFCP PHASE1:Hg19::chr17:42983748..42983759,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2670|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=4235|TSSclassifier=S|UniProt=|association_with_transcript=111bp_to_U92979_5end|coexpression_cluster_id=C4|description=CAGE_peak_28_at_GFAP_5end|id=chr17:42983748..42983759,-|ontology_enrichment_celltype=CL:0002605!1.90e-12!3;CL:0000128!6.69e-09!7;CL:0000126!6.69e-09!7;CL:0000127!6.69e-09!7;CL:0002453!6.69e-09!7|ontology_enrichment_celltype_v019=CL:0002605;8.05e-11;3|ontology_enrichment_celltype_v019_2=CL:0002605,9.10e-11,3|ontology_enrichment_development_v019=UBERON:0006241;3.74e-23;3!UBERON:0003057;3.74e-23;3!UBERON:0006601;2.96e-10;82!UBERON:0006222;9.11e-09;1!UBERON:0005425;2.64e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.73e-112!57;UBERON:0005068!2.73e-112!57;UBERON:0006241!2.73e-112!57;UBERON:0007135!2.73e-112!57;UBERON:0001017!3.82e-99!82;UBERON:0005743!3.54e-94!86;UBERON:0002616!6.07e-92!59;UBERON:0000073!2.22e-88!94;UBERON:0001016!2.22e-88!94;UBERON:0000955!5.35e-85!69;UBERON:0006238!5.35e-85!69;UBERON:0002780!2.04e-78!41;UBERON:0001890!2.04e-78!41;UBERON:0006240!2.04e-78!41;UBERON:0003080!2.07e-76!42;UBERON:0003075!2.72e-75!86;UBERON:0007284!2.72e-75!86;UBERON:0002020!1.05e-71!34;UBERON:0003528!1.05e-71!34;UBERON:0002346!1.50e-71!90;UBERON:0001893!2.10e-71!34;UBERON:0002791!2.79e-68!33;UBERON:0001869!3.00e-64!32;UBERON:0007023!7.64e-52!115;UBERON:0003056!1.30e-50!61;UBERON:0000956!4.42e-47!25;UBERON:0000203!4.42e-47!25;UBERON:0000033!1.06e-46!123;UBERON:0004121!2.33e-45!169;UBERON:0000153!4.09e-44!129;UBERON:0007811!4.09e-44!129;UBERON:0000924!4.30e-44!173;UBERON:0006601!4.30e-44!173;UBERON:0002619!2.72e-37!22;UBERON:0003076!2.09e-35!15;UBERON:0003057!2.09e-35!15;UBERON:0001950!4.82e-31!20;UBERON:0004732!6.20e-28!13;UBERON:0000025!1.49e-26!194;UBERON:0002308!2.99e-26!9;UBERON:0000125!2.99e-26!9;UBERON:0002420!4.94e-26!9;UBERON:0007245!4.94e-26!9;UBERON:0010009!4.94e-26!9;UBERON:0010011!4.94e-26!9;UBERON:0000454!4.94e-26!9;UBERON:0004733!1.21e-24!12;UBERON:0002028!1.21e-24!12;UBERON:0007277!1.21e-24!12;UBERON:0002298!5.36e-24!8;UBERON:0000200!1.16e-21!6;UBERON:0004111!1.70e-19!241;UBERON:0009663!3.94e-19!7;UBERON:0000349!5.53e-19!5;UBERON:0001871!1.23e-16!7;UBERON:0000477!5.48e-16!286;UBERON:0002680!1.67e-14!9;UBERON:0001895!1.67e-14!9;UBERON:0010092!1.67e-14!9;UBERON:0000483!5.12e-14!309;UBERON:0000119!8.67e-14!312;UBERON:0000064!1.15e-13!219;UBERON:0002240!3.12e-13!3;UBERON:0001896!3.97e-13!3;UBERON:0005290!3.97e-13!3;UBERON:0010096!3.97e-13!3;UBERON:0006331!9.07e-13!3;UBERON:0000988!1.82e-12!3;UBERON:0000475!4.87e-12!365;UBERON:0002771!6.17e-12!3;UBERON:0002148!5.21e-09!2;UBERON:0009662!5.21e-09!2;UBERON:0005162!5.63e-09!2;UBERON:0000122!5.63e-09!2;UBERON:0001894!6.69e-09!7;UBERON:0006222!6.69e-09!7;UBERON:0001875!7.40e-09!2;UBERON:0006514!7.40e-09!2;UBERON:0000369!8.71e-09!4;UBERON:0002435!8.71e-09!4;UBERON:0000204!8.71e-09!4;UBERON:0010082!8.71e-09!4;UBERON:0001876!9.34e-09!2;UBERON:0001954!9.34e-09!2;UBERON:0003022!9.34e-09!2;UBERON:0002421!9.34e-09!2;UBERON:0002600!9.34e-09!2;UBERON:0001897!1.01e-08!2;UBERON:0001873!2.33e-08!2;UBERON:0010122!2.33e-08!2;UBERON:0001870!4.07e-08!2;UBERON:0005174!4.36e-08!5;UBERON:0001137!4.36e-08!5;UBERON:0000062!4.55e-08!511;UBERON:0001872!5.44e-07!5|ontology_enrichment_uberon_v019=UBERON:0002298;5.99e-43;6!UBERON:0000073;2.61e-30;53!UBERON:0002616;2.61e-30;53!UBERON:0004732;2.40e-26;13!UBERON:0002780;3.42e-25;41!UBERON:0001890;3.42e-25;41!UBERON:0002240;3.74e-23;3!UBERON:0005174;3.74e-23;3!UBERON:0001137;3.74e-23;3!UBERON:0001896;7.54e-23;3!UBERON:0005290;7.54e-23;3!UBERON:0000988;6.44e-22;3!UBERON:0003528;9.13e-22;34!UBERON:0002020;9.13e-22;34!UBERON:0004733;2.79e-21;12!UBERON:0002028;2.79e-21;12!UBERON:0000125;1.11e-19;9!UBERON:0002308;1.11e-19;9!UBERON:0001893;3.31e-19;34!UBERON:0000955;8.85e-19;68!UBERON:0002791;3.10e-18;32!UBERON:0001017;1.33e-16;75!UBERON:0001016;1.60e-16;83!UBERON:0002148;2.32e-15;2!UBERON:0005162;2.32e-15;2!UBERON:0000122;2.32e-15;2!UBERON:0006331;2.32e-15;2!UBERON:0009662;2.32e-15;2!UBERON:0001869;4.20e-15;32!UBERON:0001897;6.58e-15;2!UBERON:0001954;6.58e-15;2!UBERON:0001875;6.58e-15;2!UBERON:0003022;6.58e-15;2!UBERON:0002421;6.58e-15;2!UBERON:0006514;6.58e-15;2!UBERON:0010225;6.58e-15;2!UBERON:0002600;6.58e-15;2!UBERON:0000349;4.00e-13;5!UBERON:0002420;8.62e-13;9!UBERON:0007245;8.62e-13;9!UBERON:0010009;8.62e-13;9!UBERON:0010011;8.62e-13;9!UBERON:0000454;8.62e-13;9!UBERON:0000956;1.31e-12;25!UBERON:0000203;1.31e-12;25!UBERON:0001894;1.03e-09;7!UBERON:0009663;1.03e-09;7!UBERON:0007023;1.67e-09;114!UBERON:0002336;9.11e-09;1!UBERON:0002038;9.11e-09;1!UBERON:0011215;9.11e-09;1!UBERON:0001018;9.11e-09;1!UBERON:0009661;9.11e-09;1!UBERON:0002950;9.11e-09;1!UBERON:0002473;9.11e-09;1!UBERON:0005340;9.11e-09;1!UBERON:0003544;9.11e-09;1!UBERON:0005970;9.11e-09;1!UBERON:0002316;9.11e-09;1!UBERON:0001020;9.11e-09;1!U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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=111bp_to_U92979_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_28_at_GFAP_5end | |||
|id=chr17:42983748..42983759,- | |||
|ontology_enrichment_celltype=CL:0002605!1.90e-12!3;CL:0000128!6.69e-09!7;CL:0000126!6.69e-09!7;CL:0000127!6.69e-09!7;CL:0002453!6.69e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.05e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.10e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.74e-23;3!UBERON:0003057;3.74e-23;3!UBERON:0006601;2.96e-10;82!UBERON:0006222;9.11e-09;1!UBERON:0005425;2.64e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p28@GFAP | |||
}} |
Revision as of 13:57, 11 September 2013
Short description: | p28@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 111bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.10e-11 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.