FFCP PHASE1:Hg19::chr17:42345731..42345756,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C33|description=CAGE_peak_at_chr17:42345731..42345756,+|id=chr17:42345731..42345756,+|ontology_enrichment_celltype=CL:0000764!8.82e-51!2;CL:0000765!8.82e-51!2;CL:0000050!8.82e-51!2;CL:0000038!8.82e-51!2;CL:0000558!8.82e-51!2;CL:0000547!8.82e-51!2;CL:0000549!8.82e-51!2;CL:0000550!8.82e-51!2;CL:0000552!8.82e-51!2|ontology_enrichment_celltype_v019=CL:0000764;5.68e-99;2!CL:0000558;5.68e-99;2|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2|ontology_enrichment_development_v019=UBERON:0004872;2.35e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.30e-09!3;UBERON:0004854!1.30e-09!3;UBERON:0009034!1.30e-09!3;UBERON:0002095!1.30e-09!3;UBERON:0004782!1.30e-09!3;UBERON:0003281!1.30e-09!3;UBERON:0009664!1.30e-09!3;UBERON:0002296!1.30e-09!3;UBERON:0005602!1.30e-09!3;UBERON:0001179!1.30e-09!3;UBERON:0006293!1.30e-09!3|ontology_enrichment_uberon_v019=UBERON:0002106;1.12e-17;3!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5244740790049,10.457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62534444561107,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03132620757723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:42345731..42345756,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr17:42345731..42345756,+ | |||
|id=chr17:42345731..42345756,+ | |||
|ontology_enrichment_celltype=CL:0000764!8.82e-51!2;CL:0000765!8.82e-51!2;CL:0000050!8.82e-51!2;CL:0000038!8.82e-51!2;CL:0000558!8.82e-51!2;CL:0000547!8.82e-51!2;CL:0000549!8.82e-51!2;CL:0000550!8.82e-51!2;CL:0000552!8.82e-51!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;5.68e-99;2!CL:0000558;5.68e-99;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.35e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.30e-09!3;UBERON:0004854!1.30e-09!3;UBERON:0009034!1.30e-09!3;UBERON:0002095!1.30e-09!3;UBERON:0004782!1.30e-09!3;UBERON:0003281!1.30e-09!3;UBERON:0009664!1.30e-09!3;UBERON:0002296!1.30e-09!3;UBERON:0005602!1.30e-09!3;UBERON:0001179!1.30e-09!3;UBERON:0006293!1.30e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.12e-17;3!UBERON:0004177;3.60e-11;5!UBERON:0005057;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-17,3;UBERON:0004854,1.12e-17,3;UBERON:0009034,1.12e-17,3;UBERON:0002095,1.12e-17,3;UBERON:0004782,1.12e-17,3;UBERON:0003281,1.12e-17,3;UBERON:0009664,1.12e-17,3;UBERON:0002296,1.12e-17,3;UBERON:0005602,1.12e-17,3;UBERON:0001179,1.12e-17,3;UBERON:0006293,1.12e-17,3;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5244740790049,10.457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62534444561107,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03132620757723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:42345731..42345756,+ | |||
}} |
Revision as of 13:53, 11 September 2013
Short description: | p@chr17:42345731..42345756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:42345731..42345756, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.68e-99 | 2 |
erythroblast | 5.68e-99 | 2 |
megakaryocyte-erythroid progenitor cell | 5.68e-99 | 2 |
erythroid progenitor cell | 5.68e-99 | 2 |
reticulocyte | 5.68e-99 | 2 |
proerythroblast | 5.68e-99 | 2 |
basophilic erythroblast | 5.68e-99 | 2 |
polychromatophilic erythroblast | 5.68e-99 | 2 |
orthochromatic erythroblast | 5.68e-99 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-17 | 3 |
gastrointestinal system mesentery | 1.12e-17 | 3 |
stomach region | 1.12e-17 | 3 |
mesentery | 1.12e-17 | 3 |
gastrointestinal system serosa | 1.12e-17 | 3 |
mesentery of stomach | 1.12e-17 | 3 |
gut mesentery | 1.12e-17 | 3 |
dorsal mesentery | 1.12e-17 | 3 |
dorsal mesogastrium | 1.12e-17 | 3 |
peritoneal cavity | 1.12e-17 | 3 |
spleen primordium | 1.12e-17 | 3 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.