FFCP PHASE1:Hg19::chr17:38120375..38120394,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:38120375..38120394,+|id=chr17:38120375..38120394,+|ontology_enrichment_celltype=CL:0002159!4.89e-27!13;CL:0002077!4.01e-17!33;CL:0000066!1.17e-16!254;CL:0000362!1.18e-14!8;CL:0002621!2.32e-14!3;CL:0000240!1.62e-12!6;CL:0000311!1.62e-12!6;CL:0000079!1.62e-12!6;CL:0000237!1.62e-12!6;CL:0000036!1.62e-12!6;CL:0000357!1.62e-12!6;CL:0000114!1.62e-12!6;CL:0002327!4.99e-11!4;CL:0000244!9.99e-11!4;CL:0000731!9.99e-11!4;CL:0000317!1.84e-10!2;CL:1000448!1.84e-10!2;CL:0002308!1.84e-10!2;CL:0002140!1.84e-10!2;CL:0000575!1.15e-09!2;CL:0000312!4.02e-09!5;CL:0002076!4.20e-08!43;CL:0000221!1.53e-07!71;CL:0002166!6.36e-07!3|ontology_enrichment_celltype_v019=CL:0000362;4.93e-43;9!CL:0002159;2.18e-39;14!CL:0002327;1.43e-34;4!CL:0000317;6.27e-32;2!CL:1000448;6.27e-32;2!CL:0002308;6.27e-32;2!CL:0002140;6.27e-32;2!CL:0000312;1.32e-28;5!CL:0000240;5.74e-24;6!CL:0000311;5.74e-24;6!CL:0000079;5.74e-24;6!CL:0000237;5.74e-24;6!CL:0002621;3.27e-21;3!CL:0002077;9.71e-16;34!CL:0000622;2.09e-13;5!CL:0000154;2.49e-11;6!CL:0000150;7.50e-08;9|ontology_enrichment_celltype_v019_2=CL:0000362,4.93e-43,9;CL:0002159,2.25e-39,14;CL:0002327,1.20e-34,4;CL:0000317,7.33e-32,2;CL:1000448,7.33e-32,2;CL:0002308,7.33e-32,2;CL:0002140,7.33e-32,2;CL:0000312,1.20e-28,5;CL:0000240,5.31e-24,6;CL:0000311,5.31e-24,6;CL:0000079,5.31e-24,6;CL:0000237,5.31e-24,6;CL:0000036,5.31e-24,6;CL:0000357,5.31e-24,6;CL:0000114,5.31e-24,6;CL:0002621,4.46e-21,3;CL:0002077,3.73e-16,34;CL:0000622,2.23e-13,5;CL:0000154,2.62e-11,6;CL:0000150,7.77e-08,9;CL:0000066,1.37e-07,253;CL:0000221,2.77e-07,72|ontology_enrichment_development_v019=CL:0000357;5.74e-24;6!CL:0000114;5.74e-24;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!2.32e-14!3;UBERON:0001003!1.50e-11!14;UBERON:0007376!1.50e-11!14;UBERON:0007383!1.50e-11!14;UBERON:0001911!4.99e-11!4;UBERON:0005333!4.99e-11!4;UBERON:0008425!4.99e-11!4;UBERON:0005311!4.99e-11!4;UBERON:0002419!1.84e-10!2;UBERON:0007771!1.84e-10!2;UBERON:0003297!1.84e-10!2;UBERON:0001821!1.84e-10!2;UBERON:0003487!1.84e-10!2;UBERON:0001820!1.84e-10!2;UBERON:0005089!1.84e-10!2;UBERON:0005088!1.84e-10!2;UBERON:0000365!1.15e-08!5;UBERON:0005910!2.77e-07!6;UBERON:0003102!3.18e-07!95;UBERON:0005085!9.31e-07!29|ontology_enrichment_uberon_v019=UBERON:0001003;9.21e-37;15!UBERON:0007376;9.21e-37;15!UBERON:0001911;1.43e-34;4!UBERON:0002419;6.27e-32;2!UBERON:0007771;6.27e-32;2!UBERON:0003297;6.27e-32;2!UBERON:0001821;6.27e-32;2!UBERON:0003487;6.27e-32;2!UBERON:0001820;6.27e-32;2!UBERON:0010371;1.28e-30;31!UBERON:0001949;3.27e-21;3!UBERON:0007029;2.08e-16;1!UBERON:0002097;1.45e-12;41!UBERON:0000486;5.35e-12;12!UBERON:0002365;6.34e-12;31!UBERON:0002330;6.34e-12;31!UBERON:0002199;1.75e-11;46!UBERON:0002416;1.75e-11;46!UBERON:0003929;1.18e-09;7!UBERON:0003350;1.47e-08;8!UBERON:0001828;1.47e-08;8!UBERON:0003102;3.72e-08;50|ontology_enrichment_uberon_v019_2=UBERON:0001003,8.93e-37,15;UBERON:0007376,8.93e-37,15;UBERON:0007383,8.93e-37,15;UBERON:0001911,1.20e-34,4;UBERON:0005333,1.20e-34,4;UBERON:0008425,1.20e-34,4;UBERON:0005311,1.20e-34,4;UBERON:0002419,7.33e-32,2;UBERON:0007771,7.33e-32,2;UBERON:0003297,7.33e-32,2;UBERON:0001821,7.33e-32,2;UBERON:0003487,7.33e-32,2;UBERON:0001820,7.33e-32,2;UBERON:0005089,7.33e-32,2;UBERON:0005088,7.33e-32,2;UBERON:0001949,4.46e-21,3;UBERON:0000076,1.05e-17,8;UBERON:0010371,1.21e-16,104;UBERON:0007029,1.93e-16,1;UBERON:0002097,2.26e-13,41;UBERON:0002365,2.22e-12,31;UBERON:0005085,2.22e-12,31;UBERON:0002330,2.22e-12,31;UBERON:0002199,6.79e-12,46;UBERON:0002416,6.79e-12,46;UBERON:0003102,9.29e-12,99;UBERON:0004121,1.26e-09,171;UBERON:0000924,1.26e-09,171;UBERON:0006601,1.26e-09,171;UBERON:0003350,1.65e-08,8;UBERON:0001828,1.65e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,1.09098448236334,0.860413786167011,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49976170175365,5.62008766288098,5.2275065654048,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,1.41775097242386,2.5971971583826,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:38120375..38120394,+ | |||
|id=chr17:38120375..38120394,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.89e-27!13;CL:0002077!4.01e-17!33;CL:0000066!1.17e-16!254;CL:0000362!1.18e-14!8;CL:0002621!2.32e-14!3;CL:0000240!1.62e-12!6;CL:0000311!1.62e-12!6;CL:0000079!1.62e-12!6;CL:0000237!1.62e-12!6;CL:0000036!1.62e-12!6;CL:0000357!1.62e-12!6;CL:0000114!1.62e-12!6;CL:0002327!4.99e-11!4;CL:0000244!9.99e-11!4;CL:0000731!9.99e-11!4;CL:0000317!1.84e-10!2;CL:1000448!1.84e-10!2;CL:0002308!1.84e-10!2;CL:0002140!1.84e-10!2;CL:0000575!1.15e-09!2;CL:0000312!4.02e-09!5;CL:0002076!4.20e-08!43;CL:0000221!1.53e-07!71;CL:0002166!6.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000362;4.93e-43;9!CL:0002159;2.18e-39;14!CL:0002327;1.43e-34;4!CL:0000317;6.27e-32;2!CL:1000448;6.27e-32;2!CL:0002308;6.27e-32;2!CL:0002140;6.27e-32;2!CL:0000312;1.32e-28;5!CL:0000240;5.74e-24;6!CL:0000311;5.74e-24;6!CL:0000079;5.74e-24;6!CL:0000237;5.74e-24;6!CL:0002621;3.27e-21;3!CL:0002077;9.71e-16;34!CL:0000622;2.09e-13;5!CL:0000154;2.49e-11;6!CL:0000150;7.50e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000362,4.93e-43,9;CL:0002159,2.25e-39,14;CL:0002327,1.20e-34,4;CL:0000317,7.33e-32,2;CL:1000448,7.33e-32,2;CL:0002308,7.33e-32,2;CL:0002140,7.33e-32,2;CL:0000312,1.20e-28,5;CL:0000240,5.31e-24,6;CL:0000311,5.31e-24,6;CL:0000079,5.31e-24,6;CL:0000237,5.31e-24,6;CL:0000036,5.31e-24,6;CL:0000357,5.31e-24,6;CL:0000114,5.31e-24,6;CL:0002621,4.46e-21,3;CL:0002077,3.73e-16,34;CL:0000622,2.23e-13,5;CL:0000154,2.62e-11,6;CL:0000150,7.77e-08,9;CL:0000066,1.37e-07,253;CL:0000221,2.77e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;5.74e-24;6!CL:0000114;5.74e-24;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.32e-14!3;UBERON:0001003!1.50e-11!14;UBERON:0007376!1.50e-11!14;UBERON:0007383!1.50e-11!14;UBERON:0001911!4.99e-11!4;UBERON:0005333!4.99e-11!4;UBERON:0008425!4.99e-11!4;UBERON:0005311!4.99e-11!4;UBERON:0002419!1.84e-10!2;UBERON:0007771!1.84e-10!2;UBERON:0003297!1.84e-10!2;UBERON:0001821!1.84e-10!2;UBERON:0003487!1.84e-10!2;UBERON:0001820!1.84e-10!2;UBERON:0005089!1.84e-10!2;UBERON:0005088!1.84e-10!2;UBERON:0000365!1.15e-08!5;UBERON:0005910!2.77e-07!6;UBERON:0003102!3.18e-07!95;UBERON:0005085!9.31e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;9.21e-37;15!UBERON:0007376;9.21e-37;15!UBERON:0001911;1.43e-34;4!UBERON:0002419;6.27e-32;2!UBERON:0007771;6.27e-32;2!UBERON:0003297;6.27e-32;2!UBERON:0001821;6.27e-32;2!UBERON:0003487;6.27e-32;2!UBERON:0001820;6.27e-32;2!UBERON:0010371;1.28e-30;31!UBERON:0001949;3.27e-21;3!UBERON:0007029;2.08e-16;1!UBERON:0002097;1.45e-12;41!UBERON:0000486;5.35e-12;12!UBERON:0002365;6.34e-12;31!UBERON:0002330;6.34e-12;31!UBERON:0002199;1.75e-11;46!UBERON:0002416;1.75e-11;46!UBERON:0003929;1.18e-09;7!UBERON:0003350;1.47e-08;8!UBERON:0001828;1.47e-08;8!UBERON:0003102;3.72e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,8.93e-37,15;UBERON:0007376,8.93e-37,15;UBERON:0007383,8.93e-37,15;UBERON:0001911,1.20e-34,4;UBERON:0005333,1.20e-34,4;UBERON:0008425,1.20e-34,4;UBERON:0005311,1.20e-34,4;UBERON:0002419,7.33e-32,2;UBERON:0007771,7.33e-32,2;UBERON:0003297,7.33e-32,2;UBERON:0001821,7.33e-32,2;UBERON:0003487,7.33e-32,2;UBERON:0001820,7.33e-32,2;UBERON:0005089,7.33e-32,2;UBERON:0005088,7.33e-32,2;UBERON:0001949,4.46e-21,3;UBERON:0000076,1.05e-17,8;UBERON:0010371,1.21e-16,104;UBERON:0007029,1.93e-16,1;UBERON:0002097,2.26e-13,41;UBERON:0002365,2.22e-12,31;UBERON:0005085,2.22e-12,31;UBERON:0002330,2.22e-12,31;UBERON:0002199,6.79e-12,46;UBERON:0002416,6.79e-12,46;UBERON:0003102,9.29e-12,99;UBERON:0004121,1.26e-09,171;UBERON:0000924,1.26e-09,171;UBERON:0006601,1.26e-09,171;UBERON:0003350,1.65e-08,8;UBERON:0001828,1.65e-08,8 | |||
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|short_description=p@chr17:38120375..38120394,+ | |||
}} |
Revision as of 13:21, 11 September 2013
Short description: | p@chr17:38120375..38120394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38120375..38120394, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epidermal cell | 4.93e-43 | 9 |
general ecto-epithelial cell | 2.25e-39 | 14 |
mammary gland epithelial cell | 1.20e-34 | 4 |
sebum secreting cell | 7.33e-32 | 2 |
epithelial cell of sweat gland | 7.33e-32 | 2 |
epithelial cell of skin gland | 7.33e-32 | 2 |
acinar cell of sebaceous gland | 7.33e-32 | 2 |
keratinocyte | 1.20e-28 | 5 |
stratified squamous epithelial cell | 5.31e-24 | 6 |
keratin accumulating cell | 5.31e-24 | 6 |
stratified epithelial cell | 5.31e-24 | 6 |
keratinizing barrier epithelial cell | 5.31e-24 | 6 |
epithelial fate stem cell | 5.31e-24 | 6 |
stratified epithelial stem cell | 5.31e-24 | 6 |
surface ectodermal cell | 5.31e-24 | 6 |
gingival epithelial cell | 4.46e-21 | 3 |
ecto-epithelial cell | 3.73e-16 | 34 |
acinar cell | 2.23e-13 | 5 |
protein secreting cell | 2.62e-11 | 6 |
glandular epithelial cell | 7.77e-08 | 9 |
epithelial cell | 1.37e-07 | 253 |
ectodermal cell | 2.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 8.93e-37 | 15 |
outer epithelium | 8.93e-37 | 15 |
enveloping layer of ectoderm | 8.93e-37 | 15 |
mammary gland | 1.20e-34 | 4 |
mammary bud | 1.20e-34 | 4 |
mammary ridge | 1.20e-34 | 4 |
mammary placode | 1.20e-34 | 4 |
skin gland | 7.33e-32 | 2 |
epidermis gland | 7.33e-32 | 2 |
gland of integumental system | 7.33e-32 | 2 |
sebaceous gland | 7.33e-32 | 2 |
skin sebaceous gland | 7.33e-32 | 2 |
sweat gland | 7.33e-32 | 2 |
sweat gland placode | 7.33e-32 | 2 |
sebaceous gland placode | 7.33e-32 | 2 |
gingival epithelium | 4.46e-21 | 3 |
external ectoderm | 1.05e-17 | 8 |
ecto-epithelium | 1.21e-16 | 104 |
surface | 1.93e-16 | 1 |
skin of body | 2.26e-13 | 41 |
exocrine gland | 2.22e-12 | 31 |
ectodermal placode | 2.22e-12 | 31 |
exocrine system | 2.22e-12 | 31 |
integument | 6.79e-12 | 46 |
integumental system | 6.79e-12 | 46 |
surface structure | 9.29e-12 | 99 |
ectoderm-derived structure | 1.26e-09 | 171 |
ectoderm | 1.26e-09 | 171 |
presumptive ectoderm | 1.26e-09 | 171 |
epithelium of mucosa | 1.65e-08 | 8 |
gingiva | 1.65e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.