FFCP PHASE1:Hg19::chr16:62070249..62070256,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1006|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1767|TSSclassifier=W|UniProt=P55286|association_with_transcript=-213bp_to_uc002eog.1_5end|description=CAGE_peak_5_at_CDH8_5end|id=chr16:62070249..62070256,-|ontology_enrichment_celltype=CL:0000064!2.28e-07!3;CL:0005012!2.28e-07!3;CL:0000067!2.28e-07!3;CL:0002304!2.28e-07!3|ontology_enrichment_celltype_v019=CL:0000222;9.81e-20;1!CL:0000047;2.48e-10;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;9.81e-20;1!DOID:3451;1.50e-10;2!DOID:4159;1.50e-10;2!DOID:0060122;1.50e-10;2!DOID:171;3.76e-08;10|ontology_enrichment_disease_v019_2=DOID:2513,1.08e-19,1;DOID:3451,1.57e-10,2;DOID:4159,1.57e-10,2;DOID:0060122,1.57e-10,2;DOID:171,3.63e-08,10|ontology_enrichment_uberon=UBERON:0001049!1.96e-45!57;UBERON:0005068!1.96e-45!57;UBERON:0006241!1.96e-45!57;UBERON:0007135!1.96e-45!57;UBERON:0001893!6.47e-44!34;UBERON:0002020!1.12e-43!34;UBERON:0003528!1.12e-43!34;UBERON:0002346!1.21e-43!90;UBERON:0002780!1.35e-43!41;UBERON:0001890!1.35e-43!41;UBERON:0006240!1.35e-43!41;UBERON:0001869!1.40e-43!32;UBERON:0003080!2.36e-42!42;UBERON:0002791!6.57e-42!33;UBERON:0001017!3.37e-41!82;UBERON:0005743!9.52e-41!86;UBERON:0002616!1.50e-38!59;UBERON:0003075!1.34e-37!86;UBERON:0007284!1.34e-37!86;UBERON:0003056!2.09e-37!61;UBERON:0000073!1.10e-35!94;UBERON:0001016!1.10e-35!94;UBERON:0000955!7.30e-35!69;UBERON:0006238!7.30e-35!69;UBERON:0002619!3.08e-31!22;UBERON:0001950!4.42e-31!20;UBERON:0000956!4.73e-30!25;UBERON:0000203!4.73e-30!25;UBERON:0000924!2.57e-23!173;UBERON:0006601!2.57e-23!173;UBERON:0000033!2.96e-22!123;UBERON:0007023!7.92e-22!115;UBERON:0000153!1.17e-20!129;UBERON:0007811!1.17e-20!129;UBERON:0004121!1.46e-19!169;UBERON:0002420!1.58e-15!9;UBERON:0007245!1.58e-15!9;UBERON:0010009!1.58e-15!9;UBERON:0010011!1.58e-15!9;UBERON:0000454!1.58e-15!9;UBERON:0002308!4.33e-15!9;UBERON:0000125!4.33e-15!9;UBERON:0000200!1.12e-13!6;UBERON:0001871!2.99e-13!7;UBERON:0002021!1.73e-11!5;UBERON:0009663!1.76e-11!7;UBERON:0000369!7.90e-10!4;UBERON:0002435!7.90e-10!4;UBERON:0000204!7.90e-10!4;UBERON:0010082!7.90e-10!4;UBERON:0000025!8.71e-10!194;UBERON:0000349!7.19e-08!5;UBERON:0005383!1.29e-07!3;UBERON:0005382!1.29e-07!3;UBERON:0002771!1.96e-07!3;UBERON:0000988!2.14e-07!3;UBERON:0001778!2.28e-07!3;UBERON:0001775!2.28e-07!3;UBERON:0000475!2.50e-07!365;UBERON:0000064!3.57e-07!219|ontology_enrichment_uberon_v019=UBERON:0001882;2.71e-19;1!UBERON:0001874;2.71e-19;1!UBERON:0005403;2.71e-19;1!UBERON:0000369;6.17e-19;4!UBERON:0002435;6.17e-19;4!UBERON:0002346;6.17e-19;4!UBERON:0000923;6.17e-19;4!UBERON:0010316;6.17e-19;4!UBERON:0005291;6.17e-19;4!UBERON:0000204;6.17e-19;4!UBERON:0002021;2.33e-15;5!UBERON:0002050;2.33e-15;5!UBERON:0005423;2.33e-15;5!UBERON:0009663;2.98e-11;7!UBERON:0001905;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0002791;1.52e-09;32!UBERON:0002420;5.86e-09;9!UBERON:0000125;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0002308;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0001869;9.36e-09;32!UBERON:0003528;2.32e-08;34!UBERON:0002020;2.32e-08;34!UBERON:0002780;6.33e-08;41!UBERON:0001890;6.33e-08;41!UBERON:0001893;2.06e-07;34!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001882,2.71e-19,1;UBERON:0005403,2.71e-19,1;UBERON:0001874,3.91e-19,1;UBERON:0000369,7.41e-19,4;UBERON:0002435,7.41e-19,4;UBERON:0000204,7.41e-19,4;UBERON:0010082,7.41e-19,4;UBERON:0002021,2.02e-15,5;UBERON:0002346,9.37e-13,86;UBERON:0009663,3.30e-11,7;UBERON:0002780,8.19e-11,41;UBERON:0001890,8.19e-11,41;UBERON:0003080,8.19e-11,41;UBERON:0006240,8.19e-11,41;UBERON:0001905,2.07e-10,2;UBERON:0002757,2.07e-10,2;UBERON:0010134,2.07e-10,2;UBERON:0005408,2.07e-10,2;UBERON:0001899,2.07e-10,2;UBERON:0003056,2.71e-10,61;UBERON:0002791,4.62e-09,32;UBERON:0001869,4.62e-09,32;UBERON:0002420,6.36e-09,9;UBERON:0000125,6.36e-09,9;UBERON:0007245,6.36e-09,9;UBERON:0002308,6.36e-09,9;UBERON:0010009,6.36e-09,9;UBERON:0010011,6.36e-09,9;UBERON:0000454,6.36e-09,9;UBERON:0003528,1.46e-08,34;UBERON:0002020,1.46e-08,34;UBERON:0001893,1.46e-08,34;UBERON:0000073,2.02e-08,53;UBERON:0002616,2.02e-08,53;UBERON:0001049,5.59e-08,56;UBERON:0005068,5.59e-08,56;UBERON:0006241,5.59e-08,56;UBERON:0007135,5.59e-08,56;UBERON:0004121,9.12e-08,171;UBERON:0000924,9.12e-08,171;UBERON:0006601,9.12e-08,171;UBERON:0001017,1.14e-07,81;UBERON:0003075,1.22e-07,82;UBERON:0007284,1.22e-07,82;UBERON:0005383,2.97e-07,3;UBERON:0005382,2.97e-07,3;UBERON:0001016,6.77e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1767 | |||
|TSSclassifier=W | |||
|UniProt=P55286 | |||
|association_with_transcript=-213bp_to_uc002eog.1_5end | |||
|description=CAGE_peak_5_at_CDH8_5end | |||
|id=chr16:62070249..62070256,- | |||
|ontology_enrichment_celltype=CL:0000064!2.28e-07!3;CL:0005012!2.28e-07!3;CL:0000067!2.28e-07!3;CL:0002304!2.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.81e-20;1!CL:0000047;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;9.81e-20;1!DOID:3451;1.50e-10;2!DOID:4159;1.50e-10;2!DOID:0060122;1.50e-10;2!DOID:171;3.76e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.08e-19,1;DOID:3451,1.57e-10,2;DOID:4159,1.57e-10,2;DOID:0060122,1.57e-10,2;DOID:171,3.63e-08,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001882;2.71e-19;1!UBERON:0001874;2.71e-19;1!UBERON:0005403;2.71e-19;1!UBERON:0000369;6.17e-19;4!UBERON:0002435;6.17e-19;4!UBERON:0002346;6.17e-19;4!UBERON:0000923;6.17e-19;4!UBERON:0010316;6.17e-19;4!UBERON:0005291;6.17e-19;4!UBERON:0000204;6.17e-19;4!UBERON:0002021;2.33e-15;5!UBERON:0002050;2.33e-15;5!UBERON:0005423;2.33e-15;5!UBERON:0009663;2.98e-11;7!UBERON:0001905;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0002791;1.52e-09;32!UBERON:0002420;5.86e-09;9!UBERON:0000125;5.86e-09;9!UBERON:0007245;5.86e-09;9!UBERON:0002308;5.86e-09;9!UBERON:0010009;5.86e-09;9!UBERON:0010011;5.86e-09;9!UBERON:0000454;5.86e-09;9!UBERON:0001869;9.36e-09;32!UBERON:0003528;2.32e-08;34!UBERON:0002020;2.32e-08;34!UBERON:0002780;6.33e-08;41!UBERON:0001890;6.33e-08;41!UBERON:0001893;2.06e-07;34!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
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|short_description=p5@CDH8 | |||
}} |
Revision as of 11:01, 11 September 2013
Short description: | p5@CDH8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CDH8_5end |
Coexpression cluster: | NA |
Association with transcript: | -213bp_to_uc002eog.1_5end |
EntrezGene: | CDH8 |
HGNC: | 1767 |
UniProt: | P55286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.08e-19 | 1 |
skin carcinoma | 1.57e-10 | 2 |
skin cancer | 1.57e-10 | 2 |
integumentary system cancer | 1.57e-10 | 2 |
neuroectodermal tumor | 3.63e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.