FFCP PHASE1:Hg19::chr15:93616900..93616918,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56963|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30308|TSSclassifier=S|UniProt=F5H7G2,G3V3Z3,A8K5Q0|association_with_transcript=0bp_to_ENST00000538818,ENST00000554387,uc002bsr.1,uc010boi.1_5end|coexpression_cluster_id=C1678|description=CAGE_peak_6_at_RGMA_5end|id=chr15:93616900..93616918,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006241;1.74e-34;3!UBERON:0003057;1.74e-34;3!UBERON:0001045;1.57e-12;1!UBERON:0006222;3.44e-12;1!UBERON:0006601;2.75e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.37e-70!115;UBERON:0001049!3.10e-55!57;UBERON:0005068!3.10e-55!57;UBERON:0006241!3.10e-55!57;UBERON:0007135!3.10e-55!57;UBERON:0001017!1.00e-50!82;UBERON:0005743!6.20e-48!86;UBERON:0002616!7.81e-43!59;UBERON:0000073!1.71e-42!94;UBERON:0001016!1.71e-42!94;UBERON:0000955!3.48e-40!69;UBERON:0006238!3.48e-40!69;UBERON:0002020!1.70e-37!34;UBERON:0003528!1.70e-37!34;UBERON:0001893!2.94e-37!34;UBERON:0002780!1.41e-36!41;UBERON:0001890!1.41e-36!41;UBERON:0006240!1.41e-36!41;UBERON:0003075!7.10e-36!86;UBERON:0007284!7.10e-36!86;UBERON:0003080!1.43e-35!42;UBERON:0002791!7.48e-35!33;UBERON:0002346!7.03e-34!90;UBERON:0001869!2.96e-32!32;UBERON:0000033!2.92e-28!123;UBERON:0000153!1.69e-26!129;UBERON:0007811!1.69e-26!129;UBERON:0004121!4.93e-26!169;UBERON:0000924!3.50e-25!173;UBERON:0006601!3.50e-25!173;UBERON:0002619!1.12e-22!22;UBERON:0003056!1.17e-22!61;UBERON:0002308!3.63e-22!9;UBERON:0000125!3.63e-22!9;UBERON:0001950!1.68e-21!20;UBERON:0003076!8.00e-21!15;UBERON:0003057!8.00e-21!15;UBERON:0002298!3.26e-20!8;UBERON:0000956!1.15e-19!25;UBERON:0000203!1.15e-19!25;UBERON:0002420!1.84e-16!9;UBERON:0007245!1.84e-16!9;UBERON:0010009!1.84e-16!9;UBERON:0010011!1.84e-16!9;UBERON:0000454!1.84e-16!9;UBERON:0009663!4.27e-16!7;UBERON:0004733!6.82e-13!12;UBERON:0002028!6.82e-13!12;UBERON:0007277!6.82e-13!12;UBERON:0000025!1.11e-12!194;UBERON:0004732!8.26e-12!13;UBERON:0004111!1.62e-11!241;UBERON:0002240!3.57e-11!3;UBERON:0001896!4.49e-11!3;UBERON:0005290!4.49e-11!3;UBERON:0010096!4.49e-11!3;UBERON:0000988!5.46e-11!3;UBERON:0006331!6.63e-11!3;UBERON:0002021!6.05e-10!5;UBERON:0000477!7.16e-09!286;UBERON:0000475!1.08e-08!365;UBERON:0000200!1.77e-08!6;UBERON:0000064!2.00e-08!219;UBERON:0002148!6.06e-08!2;UBERON:0009662!6.06e-08!2;UBERON:0000062!7.64e-08!511;UBERON:0000369!1.06e-07!4;UBERON:0002435!1.06e-07!4;UBERON:0000204!1.06e-07!4;UBERON:0010082!1.06e-07!4;UBERON:0001875!1.66e-07!2;UBERON:0006514!1.66e-07!2;UBERON:0001873!1.94e-07!2;UBERON:0010122!1.94e-07!2;UBERON:0005174!7.99e-07!5;UBERON:0001137!7.99e-07!5|ontology_enrichment_uberon_v019=UBERON:0002298;2.06e-66;6!UBERON:0002240;1.74e-34;3!UBERON:0005174;1.74e-34;3!UBERON:0001137;1.74e-34;3!UBERON:0001896;2.45e-34;3!UBERON:0005290;2.45e-34;3!UBERON:0000988;6.75e-34;3!UBERON:0004733;3.88e-33;12!UBERON:0002028;3.88e-33;12!UBERON:0004732;1.42e-30;13!UBERON:0002148;1.58e-23;2!UBERON:0006331;1.58e-23;2!UBERON:0009662;1.58e-23;2!UBERON:0000125;4.75e-20;9!UBERON:0002308;4.75e-20;9!UBERON:0000073;5.88e-20;53!UBERON:0002616;5.88e-20;53!UBERON:0002336;1.57e-12;1!UBERON:0001154;1.57e-12;1!UBERON:0001153;1.57e-12;1!UBERON:0011215;1.57e-12;1!UBERON:0001018;1.57e-12;1!UBERON:0009854;1.57e-12;1!UBERON:0002473;1.57e-12;1!UBERON:0005340;1.57e-12;1!UBERON:0003544;1.57e-12;1!UBERON:0005970;1.57e-12;1!UBERON:0002316;1.57e-12;1!UBERON:0001020;1.57e-12;1!UBERON:0002437;1.57e-12;1!UBERON:0002038;3.44e-12;1!UBERON:0009661;3.44e-12;1!UBERON:0002950;3.44e-12;1!UBERON:0001891;3.44e-12;1!UBERON:0002680;9.78e-12;9!UBERON:0001895;9.78e-12;9!UBERON:0001017;1.11e-11;75!UBERON:0001016;2.41e-11;83!UBERON:0000955;2.74e-08;68!UBERON:0002780;6.27e-08;41!UBERON:0001890;6.27e-08;41!UBERON:0009663;3.24e-07;7!UBERON:0001894;4.03e-07;7!UBERON:0001875;6.80e-07;2!UBERON:0005162;6.80e-07;2!UBERON:0000122;6.80e-07;2!UBERON:0006514;6.80e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.47e-66,6;UBERON:0003076,2.02e-59,15;UBERON:0003057,2.02e-59,15;UBERON:0001049,1.06e-41,56;UBERON:0005068,1.06e-41,56;UBERON:0006241,1.06e-41,56;UBERON:0007135,1.06e-41,56;UBERON:0002240,1.11e-34,3;UBERON:0005174,1.11e-34,3;UBERON:0001137,1.11e-34,3;UBERON:0001896,2.45e-34,3;UBERON:0005290,2.45e-34,3;UBERON:0010096,2.45e-34,3;UBERON:0000988,4.82e-34,3;UBERON:0004733,3.28e-33,12;UBERON:0002028,3.28e-33,12;UBERON:0007277,3.28e-33,12;UBERON:0001017,4.98e-32,81;UBERON:0004732,1.22e-30,13;UBERON:0001016,1.06e-28,89;UBERON:0003075,4.79e-28,82;UBERON:0007284,4.79e-28,82;UBERON:0000073,9.78e-28,53;UBERON:0002616,9.78e-28,53;UBERON:0002346,1.15e-26,86;UBERON:0002148,1.59e-23,2;UBERON:0006331,1.59e-23,2;UBERON:0009662,1.59e-23,2;UBERON:0007023,9.60e-23,114;UBERON:0010371,9.29e-22,104;UBERON:0000955,4.93e-21,68;UBERON:0006238,4.93e-21,68;UBERON:0000125,5.51e-20,9;UBERON:0002308,5.51e-20,9;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30308 | |||
|TSSclassifier=S | |||
|UniProt=F5H7G2,G3V3Z3,A8K5Q0 | |||
|association_with_transcript=0bp_to_ENST00000538818,ENST00000554387,uc002bsr.1,uc010boi.1_5end | |||
|coexpression_cluster_id=C1678 | |||
|description=CAGE_peak_6_at_RGMA_5end | |||
|id=chr15:93616900..93616918,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.74e-34;3!UBERON:0003057;1.74e-34;3!UBERON:0001045;1.57e-12;1!UBERON:0006222;3.44e-12;1!UBERON:0006601;2.75e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@RGMA | |||
}} |
Revision as of 09:01, 11 September 2013
Short description: | p6@RGMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RGMA_5end |
Coexpression cluster: | C1678_medulla_spinal_locus_pons_corpus_globus_thalamus |
Association with transcript: | 0bp_to_ENST00000538818, ENST00000554387, uc002bsr.1, uc010boi.1_5end |
EntrezGene: | RGMA |
HGNC: | 30308 |
UniProt: | F5H7G2G3V3Z3A8K5Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.