FFCP PHASE1:Hg19::chr15:56208964..56208977,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7727|TSSclassifier=N|UniProt=|association_with_transcript=-297bp_to_ENST00000503468_5end|description=CAGE_peak_11_at_NEDD4_5end|id=chr15:56208964..56208977,-|ontology_enrichment_celltype=CL:0000055!4.12e-11!180;CL:0002622!5.45e-08!3;CL:0000057!7.29e-08!75;CL:0002552!1.19e-07!5|ontology_enrichment_celltype_v019=CL:0002195;6.25e-45;2!CL:0002571;6.25e-45;2!CL:0002563;6.50e-07;4|ontology_enrichment_celltype_v019_2=CL:0002195,4.00e-45,2;CL:0002571,4.00e-45,2;CL:0002563,6.50e-07,4|ontology_enrichment_development_v019=UBERON:0006238;5.86e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;2.09e-23;1!DOID:3350;2.07e-12;2!DOID:3093;2.75e-08;11|ontology_enrichment_disease_v019_2=DOID:6193,2.62e-23,1;DOID:3350,2.32e-12,2;DOID:3093,2.85e-08,11|ontology_enrichment_uberon=UBERON:0002367!1.55e-09!11;UBERON:0010147!1.55e-09!11;UBERON:0009846!1.55e-09!11;UBERON:0003353!1.55e-09!11;UBERON:0004902!1.55e-09!11;UBERON:0003820!1.55e-09!11;UBERON:0009847!1.55e-09!11;UBERON:0000162!3.51e-09!14;UBERON:0001353!3.51e-09!14;UBERON:0000163!3.51e-09!14;UBERON:0006866!3.51e-09!14;UBERON:0000164!3.51e-09!14;UBERON:0000931!3.51e-09!14;UBERON:0003937!1.21e-08!12;UBERON:0005399!1.21e-08!12;UBERON:0004122!1.80e-08!15;UBERON:0003102!8.83e-07!95;UBERON:0000161!9.45e-07!35|ontology_enrichment_uberon_v019=UBERON:0001389;2.09e-23;1!UBERON:0000026;2.09e-23;1!UBERON:0008784;2.09e-23;1!UBERON:0006058;2.09e-23;1!UBERON:0003663;2.09e-23;1!UBERON:0004256;2.09e-23;1!UBERON:0004708;2.09e-23;1!UBERON:0002101;2.09e-23;1!UBERON:0004709;2.09e-23;1!UBERON:0002529;2.09e-23;1!UBERON:0010538;2.09e-23;1!UBERON:0003661;2.09e-23;1!UBERON:0010890;2.09e-23;1!UBERON:0002471;2.09e-23;1!UBERON:0001383;2.09e-23;1!UBERON:0010758;2.09e-23;1!UBERON:0010707;2.09e-23;1!UBERON:0000978;2.09e-23;1!UBERON:0002103;2.09e-23;1!UBERON:0001665;2.09e-23;1!UBERON:0003823;2.09e-23;1!UBERON:0000154;2.09e-23;1!UBERON:0010709;2.09e-23;1!UBERON:0005090;2.07e-12;2!UBERON:0001630;2.07e-12;2!UBERON:0001242;6.50e-07;4!UBERON:0001262;6.50e-07;4!UBERON:0004786;6.50e-07;4!UBERON:0004808;6.50e-07;4!UBERON:0001277;6.50e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.67e-23,1;UBERON:0001389,1.67e-23,1;UBERON:0000026,1.67e-23,1;UBERON:0008784,1.67e-23,1;UBERON:0006058,1.67e-23,1;UBERON:0003663,1.67e-23,1;UBERON:0004256,1.67e-23,1;UBERON:0004708,1.67e-23,1;UBERON:0002101,1.67e-23,1;UBERON:0004709,1.67e-23,1;UBERON:0002529,1.67e-23,1;UBERON:0010538,1.67e-23,1;UBERON:0003661,1.67e-23,1;UBERON:0010890,1.67e-23,1;UBERON:0002471,1.67e-23,1;UBERON:0001383,1.67e-23,1;UBERON:0004357,1.67e-23,1;UBERON:0004347,1.67e-23,1;UBERON:0005420,1.67e-23,1;UBERON:0005732,1.67e-23,1;UBERON:0010758,1.67e-23,1;UBERON:0010707,1.67e-23,1;UBERON:0000978,1.67e-23,1;UBERON:0002103,1.67e-23,1;UBERON:0001665,1.67e-23,1;UBERON:0003823,1.67e-23,1;UBERON:0000154,1.67e-23,1;UBERON:0010709,1.67e-23,1;UBERON:0005733,1.67e-23,1;UBERON:0005730,1.67e-23,1;UBERON:0005090,1.85e-12,2;UBERON:0001630,1.85e-12,2;UBERON:0001242,6.50e-07,4;UBERON:0001262,6.50e-07,4;UBERON:0004786,6.50e-07,4;UBERON:0004808,6.50e-07,4;UBERON:0001277,6.50e-07,4|phase1_expression=0,0.214100523890983,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0,0,0,0,0,0.554128230968366,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0,0,0,0,0.504867548488229,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57360388584666,0,0,0,2.84313558994037,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.68888668898764,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0.801288320820636,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.899362287916574,0,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,2.0453736500431,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-297bp_to_ENST00000503468_5end | |||
|description=CAGE_peak_11_at_NEDD4_5end | |||
|id=chr15:56208964..56208977,- | |||
|ontology_enrichment_celltype=CL:0000055!4.12e-11!180;CL:0002622!5.45e-08!3;CL:0000057!7.29e-08!75;CL:0002552!1.19e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002195;6.25e-45;2!CL:0002571;6.25e-45;2!CL:0002563;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,4.00e-45,2;CL:0002571,4.00e-45,2;CL:0002563,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.86e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.09e-23;1!DOID:3350;2.07e-12;2!DOID:3093;2.75e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.62e-23,1;DOID:3350,2.32e-12,2;DOID:3093,2.85e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0002367!1.55e-09!11;UBERON:0010147!1.55e-09!11;UBERON:0009846!1.55e-09!11;UBERON:0003353!1.55e-09!11;UBERON:0004902!1.55e-09!11;UBERON:0003820!1.55e-09!11;UBERON:0009847!1.55e-09!11;UBERON:0000162!3.51e-09!14;UBERON:0001353!3.51e-09!14;UBERON:0000163!3.51e-09!14;UBERON:0006866!3.51e-09!14;UBERON:0000164!3.51e-09!14;UBERON:0000931!3.51e-09!14;UBERON:0003937!1.21e-08!12;UBERON:0005399!1.21e-08!12;UBERON:0004122!1.80e-08!15;UBERON:0003102!8.83e-07!95;UBERON:0000161!9.45e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.09e-23;1!UBERON:0000026;2.09e-23;1!UBERON:0008784;2.09e-23;1!UBERON:0006058;2.09e-23;1!UBERON:0003663;2.09e-23;1!UBERON:0004256;2.09e-23;1!UBERON:0004708;2.09e-23;1!UBERON:0002101;2.09e-23;1!UBERON:0004709;2.09e-23;1!UBERON:0002529;2.09e-23;1!UBERON:0010538;2.09e-23;1!UBERON:0003661;2.09e-23;1!UBERON:0010890;2.09e-23;1!UBERON:0002471;2.09e-23;1!UBERON:0001383;2.09e-23;1!UBERON:0010758;2.09e-23;1!UBERON:0010707;2.09e-23;1!UBERON:0000978;2.09e-23;1!UBERON:0002103;2.09e-23;1!UBERON:0001665;2.09e-23;1!UBERON:0003823;2.09e-23;1!UBERON:0000154;2.09e-23;1!UBERON:0010709;2.09e-23;1!UBERON:0005090;2.07e-12;2!UBERON:0001630;2.07e-12;2!UBERON:0001242;6.50e-07;4!UBERON:0001262;6.50e-07;4!UBERON:0004786;6.50e-07;4!UBERON:0004808;6.50e-07;4!UBERON:0001277;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.67e-23,1;UBERON:0001389,1.67e-23,1;UBERON:0000026,1.67e-23,1;UBERON:0008784,1.67e-23,1;UBERON:0006058,1.67e-23,1;UBERON:0003663,1.67e-23,1;UBERON:0004256,1.67e-23,1;UBERON:0004708,1.67e-23,1;UBERON:0002101,1.67e-23,1;UBERON:0004709,1.67e-23,1;UBERON:0002529,1.67e-23,1;UBERON:0010538,1.67e-23,1;UBERON:0003661,1.67e-23,1;UBERON:0010890,1.67e-23,1;UBERON:0002471,1.67e-23,1;UBERON:0001383,1.67e-23,1;UBERON:0004357,1.67e-23,1;UBERON:0004347,1.67e-23,1;UBERON:0005420,1.67e-23,1;UBERON:0005732,1.67e-23,1;UBERON:0010758,1.67e-23,1;UBERON:0010707,1.67e-23,1;UBERON:0000978,1.67e-23,1;UBERON:0002103,1.67e-23,1;UBERON:0001665,1.67e-23,1;UBERON:0003823,1.67e-23,1;UBERON:0000154,1.67e-23,1;UBERON:0010709,1.67e-23,1;UBERON:0005733,1.67e-23,1;UBERON:0005730,1.67e-23,1;UBERON:0005090,1.85e-12,2;UBERON:0001630,1.85e-12,2;UBERON:0001242,6.50e-07,4;UBERON:0001262,6.50e-07,4;UBERON:0004786,6.50e-07,4;UBERON:0004808,6.50e-07,4;UBERON:0001277,6.50e-07,4 | |||
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|short_description=p11@NEDD4 | |||
}} |
Revision as of 07:31, 11 September 2013
Short description: | p11@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -297bp_to_ENST00000503468_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 4.00e-45 | 2 |
hepatic mesenchymal stem cell | 4.00e-45 | 2 |
intestinal epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.62e-23 | 1 |
mesenchymal cell neoplasm | 2.32e-12 | 2 |
nervous system cancer | 2.85e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.