FFCP PHASE1:Hg19::chr14:64559863..64559877,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C68|description=CAGE_peak_at_chr14:64559863..64559877,+|id=chr14:64559863..64559877,+|ontology_enrichment_celltype=CL:0002076!3.03e-14!43;CL:0000622!1.63e-11!5;CL:0002623!4.58e-11!3;CL:0000154!1.34e-09!6;CL:0000223!1.86e-09!59;CL:0002251!5.40e-07!21|ontology_enrichment_celltype_v019=CL:0002537;7.92e-19;5!CL:0002535;3.06e-12;2!CL:0000322;1.08e-08;3|ontology_enrichment_celltype_v019_2=CL:0002537,7.92e-19,5;CL:0002535,2.90e-12,2;CL:0000322,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0007297;2.19e-12;2!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;2.19e-12;2|ontology_enrichment_disease_v019_2=DOID:3910,2.32e-12,2|ontology_enrichment_uberon=UBERON:0004119!1.00e-09!169;UBERON:0000925!1.00e-09!169;UBERON:0006595!1.00e-09!169;UBERON:0001007!2.60e-09!155;UBERON:0001555!2.60e-09!155;UBERON:0007026!2.60e-09!155;UBERON:0001004!2.21e-08!72;UBERON:0000341!2.75e-08!2;UBERON:0000464!1.90e-07!104;UBERON:0000166!3.63e-07!21;UBERON:0005178!9.97e-07!34;UBERON:0002224!9.97e-07!34|ontology_enrichment_uberon_v019=UBERON:0001301;2.34e-23;1!UBERON:0000305;9.53e-14;7!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0004175;4.65e-10;21!UBERON:0005631;6.48e-10;10!UBERON:0000158;6.48e-10;10!UBERON:0000058;8.09e-10;10!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006947;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0005904;7.91e-07;4!UBERON:0009856;7.91e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.10e-23,1;UBERON:0000305,9.53e-14,7;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0004871,3.74e-12,8;UBERON:0006947,1.04e-08,3;UBERON:0004054,1.04e-08,3;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0004175,1.53e-08,25;UBERON:0002113,2.52e-08,26;UBERON:0003918,2.52e-08,26;UBERON:0011143,2.52e-08,26;UBERON:0005095,2.52e-08,26;UBERON:0007687,2.52e-08,26;UBERON:0005631,2.44e-07,14;UBERON:0000158,2.44e-07,14;UBERON:0000489,4.48e-07,31;UBERON:0005904,7.70e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4283473858514,0,26.415820380534,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,0,1.65412492502765,2.79562669187248,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0411238488859,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,1.94334832096759,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.530450887527676,0,0,0,0.852935927603924,0.476128862927481,0,0.124149428591716,0,1.14564884900697,0.404234377916439,0.870866991587845,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:64559863..64559877,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr14:64559863..64559877,+ | |||
|id=chr14:64559863..64559877,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.03e-14!43;CL:0000622!1.63e-11!5;CL:0002623!4.58e-11!3;CL:0000154!1.34e-09!6;CL:0000223!1.86e-09!59;CL:0002251!5.40e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002537;7.92e-19;5!CL:0002535;3.06e-12;2!CL:0000322;1.08e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.92e-19,5;CL:0002535,2.90e-12,2;CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.19e-12;2!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.19e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.00e-09!169;UBERON:0000925!1.00e-09!169;UBERON:0006595!1.00e-09!169;UBERON:0001007!2.60e-09!155;UBERON:0001555!2.60e-09!155;UBERON:0007026!2.60e-09!155;UBERON:0001004!2.21e-08!72;UBERON:0000341!2.75e-08!2;UBERON:0000464!1.90e-07!104;UBERON:0000166!3.63e-07!21;UBERON:0005178!9.97e-07!34;UBERON:0002224!9.97e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.34e-23;1!UBERON:0000305;9.53e-14;7!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0006955;3.06e-12;2!UBERON:0004801;3.06e-12;2!UBERON:0004175;4.65e-10;21!UBERON:0005631;6.48e-10;10!UBERON:0000158;6.48e-10;10!UBERON:0000058;8.09e-10;10!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006947;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0004054;1.08e-08;3!UBERON:0005904;7.91e-07;4!UBERON:0009856;7.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.10e-23,1;UBERON:0000305,9.53e-14,7;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0004871,3.74e-12,8;UBERON:0006947,1.04e-08,3;UBERON:0004054,1.04e-08,3;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0004175,1.53e-08,25;UBERON:0002113,2.52e-08,26;UBERON:0003918,2.52e-08,26;UBERON:0011143,2.52e-08,26;UBERON:0005095,2.52e-08,26;UBERON:0007687,2.52e-08,26;UBERON:0005631,2.44e-07,14;UBERON:0000158,2.44e-07,14;UBERON:0000489,4.48e-07,31;UBERON:0005904,7.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4283473858514,0,26.415820380534,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,0,1.65412492502765,2.79562669187248,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0,0.977756913674015,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0411238488859,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,1.94334832096759,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.17071847709395,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.530450887527676,0,0,0,0.852935927603924,0.476128862927481,0,0.124149428591716,0,1.14564884900697,0.404234377916439,0.870866991587845,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:64559863..64559877,+ | |||
}} |
Revision as of 05:06, 11 September 2013
Short description: | p@chr14:64559863..64559877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:64559863..64559877, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.92e-19 | 5 |
epithelial cell of cervix | 2.90e-12 | 2 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.10e-23 | 1 |
amnion | 9.53e-14 | 7 |
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
uterine epithelium | 2.90e-12 | 2 |
cervix epithelium | 2.90e-12 | 2 |
somatic layer of lateral plate mesoderm | 3.74e-12 | 8 |
male genital duct | 1.04e-08 | 3 |
internal male genitalia | 1.04e-08 | 3 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
internal genitalia | 1.53e-08 | 25 |
kidney | 2.52e-08 | 26 |
kidney mesenchyme | 2.52e-08 | 26 |
upper urinary tract | 2.52e-08 | 26 |
kidney rudiment | 2.52e-08 | 26 |
kidney field | 2.52e-08 | 26 |
extraembryonic membrane | 2.44e-07 | 14 |
membranous layer | 2.44e-07 | 14 |
cavitated compound organ | 4.48e-07 | 31 |
duct of male reproductive system | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.32e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.