FFCP PHASE1:Hg19::chr14:24110986..24110989,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C55|description=CAGE_peak_at_chr14:24110986..24110989,+|id=chr14:24110986..24110989,+|ontology_enrichment_celltype=CL:0002536!5.41e-22!2;CL:0002379!7.76e-12!1;CL:0000181!9.76e-09!12;CL:0000417!9.76e-09!12;CL:0000668!9.76e-09!12;CL:0000414!9.76e-09!12;CL:0000412!9.76e-09!12;CL:0000182!9.76e-09!12|ontology_enrichment_celltype_v019=CL:0000182;1.04e-37;12!CL:0000322;8.69e-18;3!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000322,1.12e-17,3;CL:0000223,1.72e-14,58;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9|ontology_enrichment_development_v019=UBERON:0004161;4.99e-41;11!UBERON:0009497;6.70e-35;13!UBERON:0001041;4.23e-27;30!UBERON:0003104;6.32e-15;31!CL:0000223;3.02e-10;58|ontology_enrichment_disease=DOID:3620!7.76e-12!1;DOID:3565!7.76e-12!1;DOID:0060060!1.07e-11!1;DOID:0060061!1.07e-11!1;DOID:8691!1.07e-11!1;DOID:0050619!1.32e-11!1;DOID:1357!1.32e-11!1;DOID:7!1.95e-09!39;DOID:1325!5.19e-07!7;DOID:3904!5.19e-07!7;DOID:305!5.90e-07!106|ontology_enrichment_disease_v019=DOID:3910;6.30e-26;2!DOID:7;7.95e-13;39!DOID:3908;3.10e-11;5!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9|ontology_enrichment_disease_v019_2=DOID:3910,9.18e-26,2;DOID:7,2.38e-12,39;DOID:3908,3.60e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9|ontology_enrichment_uberon=UBERON:0001764!1.32e-11!1;UBERON:0001825!1.32e-11!1;UBERON:0007499!3.68e-07!25;UBERON:0000305!6.20e-07!7;UBERON:0009856!6.87e-07!26|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0002107;3.08e-24;19!UBERON:0006925;3.08e-24;19!UBERON:0002423;1.12e-18;25!UBERON:0004821;8.69e-18;3!UBERON:0007499;8.69e-18;3!UBERON:0003215;8.69e-18;3!UBERON:0010368;8.69e-18;3!UBERON:0009911;8.69e-18;3!UBERON:0002299;8.69e-18;3!UBERON:0006524;8.69e-18;3!UBERON:0008874;8.69e-18;3!UBERON:0002169;8.69e-18;3!UBERON:0004894;8.69e-18;3!UBERON:0002365;4.06e-14;31!UBERON:0002330;4.06e-14;31!UBERON:0009856;1.06e-13;4!UBERON:0002368;2.60e-13;33!UBERON:0000949;2.11e-10;43|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18174773460835,1.07140615895516,1.95470277177136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr14:24110986..24110989,+ | |||
|id=chr14:24110986..24110989,+ | |||
|ontology_enrichment_celltype=CL:0002536!5.41e-22!2;CL:0002379!7.76e-12!1;CL:0000181!9.76e-09!12;CL:0000417!9.76e-09!12;CL:0000668!9.76e-09!12;CL:0000414!9.76e-09!12;CL:0000412!9.76e-09!12;CL:0000182!9.76e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.04e-37;12!CL:0000322;8.69e-18;3!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000322,1.12e-17,3;CL:0000223,1.72e-14,58;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.99e-41;11!UBERON:0009497;6.70e-35;13!UBERON:0001041;4.23e-27;30!UBERON:0003104;6.32e-15;31!CL:0000223;3.02e-10;58 | |||
|ontology_enrichment_disease=DOID:3620!7.76e-12!1;DOID:3565!7.76e-12!1;DOID:0060060!1.07e-11!1;DOID:0060061!1.07e-11!1;DOID:8691!1.07e-11!1;DOID:0050619!1.32e-11!1;DOID:1357!1.32e-11!1;DOID:7!1.95e-09!39;DOID:1325!5.19e-07!7;DOID:3904!5.19e-07!7;DOID:305!5.90e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-26;2!DOID:7;7.95e-13;39!DOID:3908;3.10e-11;5!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.18e-26,2;DOID:7,2.38e-12,39;DOID:3908,3.60e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.32e-11!1;UBERON:0001825!1.32e-11!1;UBERON:0007499!3.68e-07!25;UBERON:0000305!6.20e-07!7;UBERON:0009856!6.87e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0002107;3.08e-24;19!UBERON:0006925;3.08e-24;19!UBERON:0002423;1.12e-18;25!UBERON:0004821;8.69e-18;3!UBERON:0007499;8.69e-18;3!UBERON:0003215;8.69e-18;3!UBERON:0010368;8.69e-18;3!UBERON:0009911;8.69e-18;3!UBERON:0002299;8.69e-18;3!UBERON:0006524;8.69e-18;3!UBERON:0008874;8.69e-18;3!UBERON:0002169;8.69e-18;3!UBERON:0004894;8.69e-18;3!UBERON:0002365;4.06e-14;31!UBERON:0002330;4.06e-14;31!UBERON:0009856;1.06e-13;4!UBERON:0002368;2.60e-13;33!UBERON:0000949;2.11e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18174773460835,1.07140615895516,1.95470277177136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:24110986..24110989,+ | |||
}} |
Revision as of 04:07, 11 September 2013
Short description: | p@chr14:24110986..24110989, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:24110986..24110989, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
pneumocyte | 1.12e-17 | 3 |
endodermal cell | 1.72e-14 | 58 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.18e-26 | 2 |
disease of anatomical entity | 2.38e-12 | 39 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 8.85e-07 | 9 |
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