FFCP PHASE1:Hg19::chr13:53173528..53173545,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=144983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=27067|TSSclassifier=W|UniProt=|association_with_transcript=-204bp_to_AK123081_5end|description=CAGE_peak_4_at_HNRNPA1L2_5end|id=chr13:53173528..53173545,+|ontology_enrichment_celltype=CL:0002139!8.91e-12!24;CL:0000220!1.60e-11!246;CL:0000066!3.26e-11!254;CL:0002321!3.45e-11!248;CL:0000071!6.18e-09!18;CL:0002546!6.18e-09!18;CL:0000076!2.93e-08!62;CL:0000115!7.69e-08!35;CL:0002078!2.80e-07!44|ontology_enrichment_celltype_v019=CL:0002139;3.96e-16;24!CL:0002159;3.86e-14;14!CL:0002621;3.34e-13;3!CL:0000240;5.18e-12;6!CL:0000311;5.18e-12;6!CL:0000079;5.18e-12;6!CL:0000237;5.18e-12;6!CL:0002076;6.04e-12;42!CL:0000362;1.12e-11;9!CL:0000115;3.31e-11;36!CL:0000071;8.71e-11;18!CL:0002327;1.04e-10;4!CL:0000244;2.00e-10;4!CL:0000731;2.00e-10;4!CL:0000317;2.28e-09;2!CL:1000448;2.28e-09;2!CL:0002308;2.28e-09;2!CL:0002140;2.28e-09;2!CL:0002368;1.27e-08;13!CL:0000312;2.51e-08;5!CL:0000622;4.15e-08;5!CL:0002138;3.45e-07;6!CL:0000307;3.51e-07;3!CL:0002078;3.57e-07;45!CL:0002231;5.16e-07;3!CL:0000076;6.55e-07;63!CL:0000154;7.95e-07;6!CL:0002543;7.95e-07;6!CL:0002166;9.25e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,3.49e-19,253;CL:0002139,3.20e-16,24;CL:0002321,3.02e-14,250;CL:0002159,7.72e-14,14;CL:0002621,2.06e-13,3;CL:0002076,1.06e-12,42;CL:0000115,2.36e-12,36;CL:0000076,6.15e-12,63;CL:0000240,6.84e-12,6;CL:0000311,6.84e-12,6;CL:0000079,6.84e-12,6;CL:0000237,6.84e-12,6;CL:0000036,6.84e-12,6;CL:0000357,6.84e-12,6;CL:0000114,6.84e-12,6;CL:0000362,1.92e-11,9;CL:0000071,7.43e-11,18;CL:0002546,7.43e-11,18;CL:0000244,1.18e-10,4;CL:0000731,1.18e-10,4;CL:0002327,1.43e-10,4;CL:0002078,1.91e-09,45;CL:0000317,4.15e-09,2;CL:1000448,4.15e-09,2;CL:0002308,4.15e-09,2;CL:0002140,4.15e-09,2;CL:0002368,1.22e-08,13;CL:0000223,1.66e-08,58;CL:0000312,3.20e-08,5;CL:0000622,8.41e-08,5;CL:0005020,3.28e-07,6;CL:0002138,3.28e-07,6;CL:0005022,3.28e-07,6;CL:0000068,3.63e-07,3;CL:0000069,3.63e-07,3;CL:0000307,3.63e-07,3;CL:0000377,3.63e-07,3;CL:0002231,5.18e-07,3;CL:0002543,6.98e-07,6;CL:0000213,7.42e-07,58;CL:0000215,7.42e-07,58|ontology_enrichment_development_v019=CL:0000357;5.18e-12;6!CL:0000114;5.18e-12;6!CL:0002546;8.71e-11;18!CL:0005022;3.45e-07;6!CL:0000377;3.51e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!6.18e-09!18;UBERON:0004638!6.18e-09!18;UBERON:0004852!6.18e-09!18;UBERON:0002049!1.33e-08!79;UBERON:0007798!1.33e-08!79;UBERON:0000055!2.24e-08!69;UBERON:0001981!3.68e-07!60;UBERON:0007500!3.68e-07!60;UBERON:0004537!3.68e-07!60;UBERON:0006965!3.68e-07!60|ontology_enrichment_uberon_v019=UBERON:0001949;3.34e-13;3!UBERON:0000486;2.66e-12;12!UBERON:0004638;8.71e-11;18!UBERON:0001986;8.71e-11;18!UBERON:0004852;8.71e-11;18!UBERON:0001911;1.04e-10;4!UBERON:0002419;2.28e-09;2!UBERON:0007771;2.28e-09;2!UBERON:0003297;2.28e-09;2!UBERON:0001821;2.28e-09;2!UBERON:0003487;2.28e-09;2!UBERON:0001820;2.28e-09;2!UBERON:0000487;1.18e-08;22!UBERON:0000365;2.00e-08;5!UBERON:0006914;1.68e-07;25!UBERON:0010371;1.93e-07;31!UBERON:0005910;4.35e-07;6!UBERON:0001003;6.79e-07;15!UBERON:0007376;6.79e-07;15!UBERON:0000055;7.82e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.06e-13,3;UBERON:0004638,7.43e-11,18;UBERON:0001986,7.43e-11,18;UBERON:0004852,7.43e-11,18;UBERON:0001911,1.43e-10,4;UBERON:0005333,1.43e-10,4;UBERON:0008425,1.43e-10,4;UBERON:0005311,1.43e-10,4;UBERON:0000055,2.83e-09,68;UBERON:0002419,4.15e-09,2;UBERON:0007771,4.15e-09,2;UBERON:0003297,4.15e-09,2;UBERON:0001821,4.15e-09,2;UBERON:0003487,4.15e-09,2;UBERON:0001820,4.15e-09,2;UBERON:0005089,4.15e-09,2;UBERON:0005088,4.15e-09,2;UBERON:0000487,1.04e-08,22;UBERON:0000365,1.31e-08,5;UBERON:0002049,1.03e-07,78;UBERON:0007798,1.03e-07,78;UBERON:0006914,1.50e-07,25;UBERON:0005910,3.08e-07,6;UBERON:0001003,9.26e-07,15;UBERON:0007376,9.26e-07,15;UBERON:0007383,9.26e-07,15;UBERON:0000947,9.69e-07,21;UBERON:0010191,9.69e-07,21|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,1.73570250803797,0,0.838998872419812,0.550236083880135,2.92592953151535,0,0.35576626268671,0.66944122552934,0.805658634218294,0,1.22031028774085,0,0,1.16089646769304,0.898117490504679,0.900891843866578,1.53316637465883,1.89853131913626,0.732806975721629,0,0,0.872188104285069,0,0.379891534993739,1.19168262731897,0.860509862246441,0,0,0,0.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81649,0.202117188958219,0.217716747896961,0,0.336760265072938,0.286888821570705,0,0.814032686109745,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p4@HNRNPA1L2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=144983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=27067 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-204bp_to_AK123081_5end | |||
|description=CAGE_peak_4_at_HNRNPA1L2_5end | |||
|id=chr13:53173528..53173545,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.91e-12!24;CL:0000220!1.60e-11!246;CL:0000066!3.26e-11!254;CL:0002321!3.45e-11!248;CL:0000071!6.18e-09!18;CL:0002546!6.18e-09!18;CL:0000076!2.93e-08!62;CL:0000115!7.69e-08!35;CL:0002078!2.80e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.96e-16;24!CL:0002159;3.86e-14;14!CL:0002621;3.34e-13;3!CL:0000240;5.18e-12;6!CL:0000311;5.18e-12;6!CL:0000079;5.18e-12;6!CL:0000237;5.18e-12;6!CL:0002076;6.04e-12;42!CL:0000362;1.12e-11;9!CL:0000115;3.31e-11;36!CL:0000071;8.71e-11;18!CL:0002327;1.04e-10;4!CL:0000244;2.00e-10;4!CL:0000731;2.00e-10;4!CL:0000317;2.28e-09;2!CL:1000448;2.28e-09;2!CL:0002308;2.28e-09;2!CL:0002140;2.28e-09;2!CL:0002368;1.27e-08;13!CL:0000312;2.51e-08;5!CL:0000622;4.15e-08;5!CL:0002138;3.45e-07;6!CL:0000307;3.51e-07;3!CL:0002078;3.57e-07;45!CL:0002231;5.16e-07;3!CL:0000076;6.55e-07;63!CL:0000154;7.95e-07;6!CL:0002543;7.95e-07;6!CL:0002166;9.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.49e-19,253;CL:0002139,3.20e-16,24;CL:0002321,3.02e-14,250;CL:0002159,7.72e-14,14;CL:0002621,2.06e-13,3;CL:0002076,1.06e-12,42;CL:0000115,2.36e-12,36;CL:0000076,6.15e-12,63;CL:0000240,6.84e-12,6;CL:0000311,6.84e-12,6;CL:0000079,6.84e-12,6;CL:0000237,6.84e-12,6;CL:0000036,6.84e-12,6;CL:0000357,6.84e-12,6;CL:0000114,6.84e-12,6;CL:0000362,1.92e-11,9;CL:0000071,7.43e-11,18;CL:0002546,7.43e-11,18;CL:0000244,1.18e-10,4;CL:0000731,1.18e-10,4;CL:0002327,1.43e-10,4;CL:0002078,1.91e-09,45;CL:0000317,4.15e-09,2;CL:1000448,4.15e-09,2;CL:0002308,4.15e-09,2;CL:0002140,4.15e-09,2;CL:0002368,1.22e-08,13;CL:0000223,1.66e-08,58;CL:0000312,3.20e-08,5;CL:0000622,8.41e-08,5;CL:0005020,3.28e-07,6;CL:0002138,3.28e-07,6;CL:0005022,3.28e-07,6;CL:0000068,3.63e-07,3;CL:0000069,3.63e-07,3;CL:0000307,3.63e-07,3;CL:0000377,3.63e-07,3;CL:0002231,5.18e-07,3;CL:0002543,6.98e-07,6;CL:0000213,7.42e-07,58;CL:0000215,7.42e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;5.18e-12;6!CL:0000114;5.18e-12;6!CL:0002546;8.71e-11;18!CL:0005022;3.45e-07;6!CL:0000377;3.51e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.18e-09!18;UBERON:0004638!6.18e-09!18;UBERON:0004852!6.18e-09!18;UBERON:0002049!1.33e-08!79;UBERON:0007798!1.33e-08!79;UBERON:0000055!2.24e-08!69;UBERON:0001981!3.68e-07!60;UBERON:0007500!3.68e-07!60;UBERON:0004537!3.68e-07!60;UBERON:0006965!3.68e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.34e-13;3!UBERON:0000486;2.66e-12;12!UBERON:0004638;8.71e-11;18!UBERON:0001986;8.71e-11;18!UBERON:0004852;8.71e-11;18!UBERON:0001911;1.04e-10;4!UBERON:0002419;2.28e-09;2!UBERON:0007771;2.28e-09;2!UBERON:0003297;2.28e-09;2!UBERON:0001821;2.28e-09;2!UBERON:0003487;2.28e-09;2!UBERON:0001820;2.28e-09;2!UBERON:0000487;1.18e-08;22!UBERON:0000365;2.00e-08;5!UBERON:0006914;1.68e-07;25!UBERON:0010371;1.93e-07;31!UBERON:0005910;4.35e-07;6!UBERON:0001003;6.79e-07;15!UBERON:0007376;6.79e-07;15!UBERON:0000055;7.82e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.06e-13,3;UBERON:0004638,7.43e-11,18;UBERON:0001986,7.43e-11,18;UBERON:0004852,7.43e-11,18;UBERON:0001911,1.43e-10,4;UBERON:0005333,1.43e-10,4;UBERON:0008425,1.43e-10,4;UBERON:0005311,1.43e-10,4;UBERON:0000055,2.83e-09,68;UBERON:0002419,4.15e-09,2;UBERON:0007771,4.15e-09,2;UBERON:0003297,4.15e-09,2;UBERON:0001821,4.15e-09,2;UBERON:0003487,4.15e-09,2;UBERON:0001820,4.15e-09,2;UBERON:0005089,4.15e-09,2;UBERON:0005088,4.15e-09,2;UBERON:0000487,1.04e-08,22;UBERON:0000365,1.31e-08,5;UBERON:0002049,1.03e-07,78;UBERON:0007798,1.03e-07,78;UBERON:0006914,1.50e-07,25;UBERON:0005910,3.08e-07,6;UBERON:0001003,9.26e-07,15;UBERON:0007376,9.26e-07,15;UBERON:0007383,9.26e-07,15;UBERON:0000947,9.69e-07,21;UBERON:0010191,9.69e-07,21 | |||
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| |||
|short_description=p4@HNRNPA1L2 | |||
}} |
Revision as of 02:37, 11 September 2013
Short description: | p4@HNRNPA1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HNRNPA1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_AK123081_5end |
EntrezGene: | HNRNPA1L2 |
HGNC: | 27067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.06e-13 | 3 |
blood vessel endothelium | 7.43e-11 | 18 |
endothelium | 7.43e-11 | 18 |
cardiovascular system endothelium | 7.43e-11 | 18 |
mammary gland | 1.43e-10 | 4 |
mammary bud | 1.43e-10 | 4 |
mammary ridge | 1.43e-10 | 4 |
mammary placode | 1.43e-10 | 4 |
vessel | 2.83e-09 | 68 |
skin gland | 4.15e-09 | 2 |
epidermis gland | 4.15e-09 | 2 |
gland of integumental system | 4.15e-09 | 2 |
sebaceous gland | 4.15e-09 | 2 |
skin sebaceous gland | 4.15e-09 | 2 |
sweat gland | 4.15e-09 | 2 |
sweat gland placode | 4.15e-09 | 2 |
sebaceous gland placode | 4.15e-09 | 2 |
simple squamous epithelium | 1.04e-08 | 22 |
urothelium | 1.31e-08 | 5 |
vasculature | 1.03e-07 | 78 |
vascular system | 1.03e-07 | 78 |
squamous epithelium | 1.50e-07 | 25 |
transitional epithelium | 3.08e-07 | 6 |
skin epidermis | 9.26e-07 | 15 |
outer epithelium | 9.26e-07 | 15 |
enveloping layer of ectoderm | 9.26e-07 | 15 |
aorta | 9.69e-07 | 21 |
aortic system | 9.69e-07 | 21 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.