FFCP PHASE1:Hg19::chr13:22245668..22245676,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2254|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3687|TSSclassifier=S|UniProt=P31371|association_with_transcript=146bp_to_ENST00000382353_5end|coexpression_cluster_id=C38|description=CAGE_peak_7_at_FGF9_5end|id=chr13:22245668..22245676,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000222;2.93e-23;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006222;2.93e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.06e-23;1!DOID:4549;1.06e-23;1!DOID:5861;1.06e-23;1!DOID:6496;1.06e-23;1|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1|ontology_enrichment_uberon=UBERON:0001049!9.64e-38!57;UBERON:0005068!9.64e-38!57;UBERON:0006241!9.64e-38!57;UBERON:0007135!9.64e-38!57;UBERON:0002616!2.61e-33!59;UBERON:0000955!1.74e-29!69;UBERON:0006238!1.74e-29!69;UBERON:0005743!2.21e-28!86;UBERON:0001017!6.00e-28!82;UBERON:0003075!1.25e-26!86;UBERON:0007284!1.25e-26!86;UBERON:0007023!1.73e-26!115;UBERON:0002780!1.20e-25!41;UBERON:0001890!1.20e-25!41;UBERON:0006240!1.20e-25!41;UBERON:0002346!3.97e-25!90;UBERON:0000073!4.99e-25!94;UBERON:0001016!4.99e-25!94;UBERON:0003080!6.19e-25!42;UBERON:0002020!4.15e-22!34;UBERON:0003528!4.15e-22!34;UBERON:0001893!6.71e-22!34;UBERON:0001869!1.17e-20!32;UBERON:0002791!1.23e-19!33;UBERON:0001950!2.41e-18!20;UBERON:0000033!1.08e-17!123;UBERON:0003056!1.20e-17!61;UBERON:0002619!1.55e-16!22;UBERON:0000153!1.55e-16!129;UBERON:0007811!1.55e-16!129;UBERON:0000956!2.38e-14!25;UBERON:0000203!2.38e-14!25;UBERON:0003076!4.65e-14!15;UBERON:0003057!4.65e-14!15;UBERON:0004733!9.50e-14!12;UBERON:0002028!9.50e-14!12;UBERON:0007277!9.50e-14!12;UBERON:0004732!1.31e-12!13;UBERON:0000988!6.10e-12!3;UBERON:0004121!7.69e-12!169;UBERON:0000924!2.11e-11!173;UBERON:0006601!2.11e-11!173;UBERON:0002298!3.44e-11!8;UBERON:0002680!6.26e-10!9;UBERON:0001895!6.26e-10!9;UBERON:0010092!6.26e-10!9;UBERON:0000200!1.14e-09!6;UBERON:0000025!1.17e-09!194;UBERON:0002308!1.32e-09!9;UBERON:0000125!1.32e-09!9;UBERON:0000064!3.55e-09!219;UBERON:0002148!2.22e-08!2;UBERON:0009662!2.22e-08!2;UBERON:0000007!4.86e-08!2;UBERON:0001875!7.14e-08!2;UBERON:0006514!7.14e-08!2;UBERON:0002021!3.59e-07!5;UBERON:0001872!4.70e-07!5;UBERON:0004111!4.93e-07!241|ontology_enrichment_uberon_v019=UBERON:0000988;3.59e-30;3!UBERON:0007190;2.93e-23;1!UBERON:0002298;1.22e-15;6!UBERON:0002148;2.45e-12;2!UBERON:0006331;2.45e-12;2!UBERON:0009662;2.45e-12;2!UBERON:0002680;9.23e-11;9!UBERON:0001895;9.23e-11;9!UBERON:0002418;8.31e-09;3!UBERON:0004755;8.31e-09;3!UBERON:0004733;2.65e-08;12!UBERON:0002028;2.65e-08;12!UBERON:0004732;9.84e-08;13!UBERON:0000073;1.28e-07;53!UBERON:0002616;1.28e-07;53!UBERON:0002780;2.46e-07;41!UBERON:0001890;2.46e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.47e-30,3;UBERON:0007190,5.13e-23,1;UBERON:0002298,7.79e-16,6;UBERON:0000073,1.09e-14,53;UBERON:0002616,1.09e-14,53;UBERON:0001049,6.41e-14,56;UBERON:0005068,6.41e-14,56;UBERON:0006241,6.41e-14,56;UBERON:0007135,6.41e-14,56;UBERON:0002148,1.65e-12,2;UBERON:0006331,1.65e-12,2;UBERON:0009662,1.65e-12,2;UBERON:0000955,2.45e-11,68;UBERON:0006238,2.45e-11,68;UBERON:0002680,6.87e-11,9;UBERON:0001895,6.87e-11,9;UBERON:0010092,6.87e-11,9;UBERON:0001017,1.47e-09,81;UBERON:0003075,1.47e-09,82;UBERON:0007284,1.47e-09,82;UBERON:0002346,4.08e-09,86;UBERON:0002418,8.31e-09,3;UBERON:0004755,8.31e-09,3;UBERON:0002780,9.61e-09,41;UBERON:0001890,9.61e-09,41;UBERON:0003080,9.61e-09,41;UBERON:0006240,9.61e-09,41;UBERON:0001016,1.29e-08,89;UBERON:0004733,2.12e-08,12;UBERON:0002028,2.12e-08,12;UBERON:0007277,2.12e-08,12;UBERON:0004732,8.03e-08,13;UBERON:0010371,1.54e-07,104;UBERON:0007023,6.19e-07,114;UBERON:0003076,6.79e-07,15;UBERON:0003057,6.79e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35444112178802,0,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.625954653532499,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.192687675289379,1.41696576325585,0,0.615349092722265,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.2156765231311,0,0.413373593002368,1.01465296310251,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,1.76721305739762,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.407948941145488,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0|short_description=p7@FGF9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2254 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3687 | |||
|TSSclassifier=S | |||
|UniProt=P31371 | |||
|association_with_transcript=146bp_to_ENST00000382353_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_7_at_FGF9_5end | |||
|id=chr13:22245668..22245676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.93e-23;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.93e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.06e-23;1!DOID:4549;1.06e-23;1!DOID:5861;1.06e-23;1!DOID:6496;1.06e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.64e-38!57;UBERON:0005068!9.64e-38!57;UBERON:0006241!9.64e-38!57;UBERON:0007135!9.64e-38!57;UBERON:0002616!2.61e-33!59;UBERON:0000955!1.74e-29!69;UBERON:0006238!1.74e-29!69;UBERON:0005743!2.21e-28!86;UBERON:0001017!6.00e-28!82;UBERON:0003075!1.25e-26!86;UBERON:0007284!1.25e-26!86;UBERON:0007023!1.73e-26!115;UBERON:0002780!1.20e-25!41;UBERON:0001890!1.20e-25!41;UBERON:0006240!1.20e-25!41;UBERON:0002346!3.97e-25!90;UBERON:0000073!4.99e-25!94;UBERON:0001016!4.99e-25!94;UBERON:0003080!6.19e-25!42;UBERON:0002020!4.15e-22!34;UBERON:0003528!4.15e-22!34;UBERON:0001893!6.71e-22!34;UBERON:0001869!1.17e-20!32;UBERON:0002791!1.23e-19!33;UBERON:0001950!2.41e-18!20;UBERON:0000033!1.08e-17!123;UBERON:0003056!1.20e-17!61;UBERON:0002619!1.55e-16!22;UBERON:0000153!1.55e-16!129;UBERON:0007811!1.55e-16!129;UBERON:0000956!2.38e-14!25;UBERON:0000203!2.38e-14!25;UBERON:0003076!4.65e-14!15;UBERON:0003057!4.65e-14!15;UBERON:0004733!9.50e-14!12;UBERON:0002028!9.50e-14!12;UBERON:0007277!9.50e-14!12;UBERON:0004732!1.31e-12!13;UBERON:0000988!6.10e-12!3;UBERON:0004121!7.69e-12!169;UBERON:0000924!2.11e-11!173;UBERON:0006601!2.11e-11!173;UBERON:0002298!3.44e-11!8;UBERON:0002680!6.26e-10!9;UBERON:0001895!6.26e-10!9;UBERON:0010092!6.26e-10!9;UBERON:0000200!1.14e-09!6;UBERON:0000025!1.17e-09!194;UBERON:0002308!1.32e-09!9;UBERON:0000125!1.32e-09!9;UBERON:0000064!3.55e-09!219;UBERON:0002148!2.22e-08!2;UBERON:0009662!2.22e-08!2;UBERON:0000007!4.86e-08!2;UBERON:0001875!7.14e-08!2;UBERON:0006514!7.14e-08!2;UBERON:0002021!3.59e-07!5;UBERON:0001872!4.70e-07!5;UBERON:0004111!4.93e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;3.59e-30;3!UBERON:0007190;2.93e-23;1!UBERON:0002298;1.22e-15;6!UBERON:0002148;2.45e-12;2!UBERON:0006331;2.45e-12;2!UBERON:0009662;2.45e-12;2!UBERON:0002680;9.23e-11;9!UBERON:0001895;9.23e-11;9!UBERON:0002418;8.31e-09;3!UBERON:0004755;8.31e-09;3!UBERON:0004733;2.65e-08;12!UBERON:0002028;2.65e-08;12!UBERON:0004732;9.84e-08;13!UBERON:0000073;1.28e-07;53!UBERON:0002616;1.28e-07;53!UBERON:0002780;2.46e-07;41!UBERON:0001890;2.46e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,1.47e-30,3;UBERON:0007190,5.13e-23,1;UBERON:0002298,7.79e-16,6;UBERON:0000073,1.09e-14,53;UBERON:0002616,1.09e-14,53;UBERON:0001049,6.41e-14,56;UBERON:0005068,6.41e-14,56;UBERON:0006241,6.41e-14,56;UBERON:0007135,6.41e-14,56;UBERON:0002148,1.65e-12,2;UBERON:0006331,1.65e-12,2;UBERON:0009662,1.65e-12,2;UBERON:0000955,2.45e-11,68;UBERON:0006238,2.45e-11,68;UBERON:0002680,6.87e-11,9;UBERON:0001895,6.87e-11,9;UBERON:0010092,6.87e-11,9;UBERON:0001017,1.47e-09,81;UBERON:0003075,1.47e-09,82;UBERON:0007284,1.47e-09,82;UBERON:0002346,4.08e-09,86;UBERON:0002418,8.31e-09,3;UBERON:0004755,8.31e-09,3;UBERON:0002780,9.61e-09,41;UBERON:0001890,9.61e-09,41;UBERON:0003080,9.61e-09,41;UBERON:0006240,9.61e-09,41;UBERON:0001016,1.29e-08,89;UBERON:0004733,2.12e-08,12;UBERON:0002028,2.12e-08,12;UBERON:0007277,2.12e-08,12;UBERON:0004732,8.03e-08,13;UBERON:0010371,1.54e-07,104;UBERON:0007023,6.19e-07,114;UBERON:0003076,6.79e-07,15;UBERON:0003057,6.79e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35444112178802,0,0,0,0.379864775735272,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.625954653532499,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.192687675289379,1.41696576325585,0,0.615349092722265,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.2156765231311,0,0.413373593002368,1.01465296310251,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,1.76721305739762,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.79062257427272,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.407948941145488,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p7@FGF9 | |||
}} |
Revision as of 01:45, 11 September 2013
Short description: | p7@FGF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_FGF9_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 146bp_to_ENST00000382353_5end |
EntrezGene: | FGF9 |
HGNC: | 3687 |
UniProt: | P31371 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.07e-23 | 1 |
extraosseous chondrosarcoma | 1.07e-23 | 1 |
myxoid chondrosarcoma | 1.07e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.07e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.