FFCP PHASE1:Hg19::chr12:5153193..5153203,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3741|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6224|TSSclassifier=S|UniProt=P22460|association_with_transcript=108bp_to_ENST00000252321,NM_002234,uc001qni.2_5end|description=CAGE_peak_2_at_KCNA5_5end|id=chr12:5153193..5153203,+|ontology_enrichment_celltype=CL:0002322!1.34e-07!5;CL:0000784!9.42e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;1.31e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.96e-89!115;UBERON:0001049!7.49e-38!57;UBERON:0005068!7.49e-38!57;UBERON:0006241!7.49e-38!57;UBERON:0007135!7.49e-38!57;UBERON:0002616!1.27e-31!59;UBERON:0003075!2.00e-29!86;UBERON:0007284!2.00e-29!86;UBERON:0001017!1.53e-28!82;UBERON:0005743!2.09e-28!86;UBERON:0002346!1.51e-27!90;UBERON:0003080!1.72e-27!42;UBERON:0000955!1.26e-26!69;UBERON:0006238!1.26e-26!69;UBERON:0002780!5.51e-26!41;UBERON:0001890!5.51e-26!41;UBERON:0006240!5.51e-26!41;UBERON:0000073!1.48e-24!94;UBERON:0001016!1.48e-24!94;UBERON:0001893!2.11e-18!34;UBERON:0002020!4.46e-18!34;UBERON:0003528!4.46e-18!34;UBERON:0003056!4.79e-18!61;UBERON:0002791!3.26e-17!33;UBERON:0000153!2.49e-16!129;UBERON:0007811!2.49e-16!129;UBERON:0001869!1.14e-15!32;UBERON:0002298!4.28e-15!8;UBERON:0000033!5.99e-15!123;UBERON:0002619!2.13e-13!22;UBERON:0001950!7.85e-13!20;UBERON:0004121!2.65e-12!169;UBERON:0000924!9.75e-12!173;UBERON:0006601!9.75e-12!173;UBERON:0000956!2.04e-11!25;UBERON:0000203!2.04e-11!25;UBERON:0003076!2.61e-11!15;UBERON:0003057!2.61e-11!15;UBERON:0000025!4.00e-11!194;UBERON:0001894!6.61e-10!7;UBERON:0006222!6.61e-10!7;UBERON:0004111!6.68e-10!241;UBERON:0000200!8.62e-10!6;UBERON:0000477!1.43e-09!286;UBERON:0004733!3.72e-09!12;UBERON:0002028!3.72e-09!12;UBERON:0007277!3.72e-09!12;UBERON:0000481!5.58e-09!347;UBERON:0002308!1.27e-08!9;UBERON:0000125!1.27e-08!9;UBERON:0004732!2.51e-08!13;UBERON:0000064!9.98e-08!219;UBERON:0000062!1.45e-07!511;UBERON:0000483!1.81e-07!309;UBERON:0001896!1.96e-07!3;UBERON:0005290!1.96e-07!3;UBERON:0010096!1.96e-07!3;UBERON:0000119!2.91e-07!312|ontology_enrichment_uberon_v019=UBERON:0001896;6.30e-14;3!UBERON:0005290;6.30e-14;3!UBERON:0007023;8.99e-13;114!UBERON:0003296;2.35e-10;4!UBERON:0010133;2.35e-10;4!UBERON:0000007;5.40e-10;2!UBERON:0001894;6.27e-10;7!UBERON:0005090;4.69e-09;2!UBERON:0001630;4.69e-09;2!UBERON:0002298;3.67e-07;6!UBERON:0000073;4.14e-07;53!UBERON:0002616;4.14e-07;53!UBERON:0003978;5.91e-07;3!UBERON:0000946;5.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.46e-44,114;UBERON:0001896,5.71e-14,3;UBERON:0005290,5.71e-14,3;UBERON:0010096,5.71e-14,3;UBERON:0001049,3.04e-11,56;UBERON:0005068,3.04e-11,56;UBERON:0006241,3.04e-11,56;UBERON:0007135,3.04e-11,56;UBERON:0003075,1.04e-10,82;UBERON:0007284,1.04e-10,82;UBERON:0003296,3.79e-10,4;UBERON:0010133,3.79e-10,4;UBERON:0002346,4.86e-10,86;UBERON:0000007,5.44e-10,2;UBERON:0001894,6.46e-10,7;UBERON:0006222,6.46e-10,7;UBERON:0003076,8.53e-10,15;UBERON:0003057,8.53e-10,15;UBERON:0005090,3.84e-09,2;UBERON:0001630,3.84e-09,2;UBERON:0000073,1.26e-08,53;UBERON:0002616,1.26e-08,53;UBERON:0001017,6.57e-08,81;UBERON:0010371,1.12e-07,104;UBERON:0002298,3.50e-07,6;UBERON:0010314,4.52e-07,132;UBERON:0003978,5.94e-07,3;UBERON:0009751,5.94e-07,3;UBERON:0000946,5.94e-07,3;UBERON:0002523,5.94e-07,3;UBERON:0005983,5.94e-07,3;UBERON:0002165,5.94e-07,3;UBERON:0002062,5.94e-07,3;UBERON:0007280,5.94e-07,3;UBERON:0001016,7.89e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,1.43094374583205,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.562677665642051,0,0,0,6.97367958878744,0.276283915531148,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.1205964386254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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6224 | |||
|TSSclassifier=S | |||
|UniProt=P22460 | |||
|association_with_transcript=108bp_to_ENST00000252321,NM_002234,uc001qni.2_5end | |||
|description=CAGE_peak_2_at_KCNA5_5end | |||
|id=chr12:5153193..5153203,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.34e-07!5;CL:0000784!9.42e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.31e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-89!115;UBERON:0001049!7.49e-38!57;UBERON:0005068!7.49e-38!57;UBERON:0006241!7.49e-38!57;UBERON:0007135!7.49e-38!57;UBERON:0002616!1.27e-31!59;UBERON:0003075!2.00e-29!86;UBERON:0007284!2.00e-29!86;UBERON:0001017!1.53e-28!82;UBERON:0005743!2.09e-28!86;UBERON:0002346!1.51e-27!90;UBERON:0003080!1.72e-27!42;UBERON:0000955!1.26e-26!69;UBERON:0006238!1.26e-26!69;UBERON:0002780!5.51e-26!41;UBERON:0001890!5.51e-26!41;UBERON:0006240!5.51e-26!41;UBERON:0000073!1.48e-24!94;UBERON:0001016!1.48e-24!94;UBERON:0001893!2.11e-18!34;UBERON:0002020!4.46e-18!34;UBERON:0003528!4.46e-18!34;UBERON:0003056!4.79e-18!61;UBERON:0002791!3.26e-17!33;UBERON:0000153!2.49e-16!129;UBERON:0007811!2.49e-16!129;UBERON:0001869!1.14e-15!32;UBERON:0002298!4.28e-15!8;UBERON:0000033!5.99e-15!123;UBERON:0002619!2.13e-13!22;UBERON:0001950!7.85e-13!20;UBERON:0004121!2.65e-12!169;UBERON:0000924!9.75e-12!173;UBERON:0006601!9.75e-12!173;UBERON:0000956!2.04e-11!25;UBERON:0000203!2.04e-11!25;UBERON:0003076!2.61e-11!15;UBERON:0003057!2.61e-11!15;UBERON:0000025!4.00e-11!194;UBERON:0001894!6.61e-10!7;UBERON:0006222!6.61e-10!7;UBERON:0004111!6.68e-10!241;UBERON:0000200!8.62e-10!6;UBERON:0000477!1.43e-09!286;UBERON:0004733!3.72e-09!12;UBERON:0002028!3.72e-09!12;UBERON:0007277!3.72e-09!12;UBERON:0000481!5.58e-09!347;UBERON:0002308!1.27e-08!9;UBERON:0000125!1.27e-08!9;UBERON:0004732!2.51e-08!13;UBERON:0000064!9.98e-08!219;UBERON:0000062!1.45e-07!511;UBERON:0000483!1.81e-07!309;UBERON:0001896!1.96e-07!3;UBERON:0005290!1.96e-07!3;UBERON:0010096!1.96e-07!3;UBERON:0000119!2.91e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;6.30e-14;3!UBERON:0005290;6.30e-14;3!UBERON:0007023;8.99e-13;114!UBERON:0003296;2.35e-10;4!UBERON:0010133;2.35e-10;4!UBERON:0000007;5.40e-10;2!UBERON:0001894;6.27e-10;7!UBERON:0005090;4.69e-09;2!UBERON:0001630;4.69e-09;2!UBERON:0002298;3.67e-07;6!UBERON:0000073;4.14e-07;53!UBERON:0002616;4.14e-07;53!UBERON:0003978;5.91e-07;3!UBERON:0000946;5.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.46e-44,114;UBERON:0001896,5.71e-14,3;UBERON:0005290,5.71e-14,3;UBERON:0010096,5.71e-14,3;UBERON:0001049,3.04e-11,56;UBERON:0005068,3.04e-11,56;UBERON:0006241,3.04e-11,56;UBERON:0007135,3.04e-11,56;UBERON:0003075,1.04e-10,82;UBERON:0007284,1.04e-10,82;UBERON:0003296,3.79e-10,4;UBERON:0010133,3.79e-10,4;UBERON:0002346,4.86e-10,86;UBERON:0000007,5.44e-10,2;UBERON:0001894,6.46e-10,7;UBERON:0006222,6.46e-10,7;UBERON:0003076,8.53e-10,15;UBERON:0003057,8.53e-10,15;UBERON:0005090,3.84e-09,2;UBERON:0001630,3.84e-09,2;UBERON:0000073,1.26e-08,53;UBERON:0002616,1.26e-08,53;UBERON:0001017,6.57e-08,81;UBERON:0010371,1.12e-07,104;UBERON:0002298,3.50e-07,6;UBERON:0010314,4.52e-07,132;UBERON:0003978,5.94e-07,3;UBERON:0009751,5.94e-07,3;UBERON:0000946,5.94e-07,3;UBERON:0002523,5.94e-07,3;UBERON:0005983,5.94e-07,3;UBERON:0002165,5.94e-07,3;UBERON:0002062,5.94e-07,3;UBERON:0007280,5.94e-07,3;UBERON:0001016,7.89e-07,89 | |||
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|short_description=p2@KCNA5 | |||
}} |
Revision as of 23:01, 10 September 2013
Short description: | p2@KCNA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KCNA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000252321, NM_002234, uc001qni.2_5end |
EntrezGene: | KCNA5 |
HGNC: | 6224 |
UniProt: | P22460 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.46e-44 | 114 |
medulla oblongata | 5.71e-14 | 3 |
myelencephalon | 5.71e-14 | 3 |
future myelencephalon | 5.71e-14 | 3 |
neural tube | 3.04e-11 | 56 |
neural rod | 3.04e-11 | 56 |
future spinal cord | 3.04e-11 | 56 |
neural keel | 3.04e-11 | 56 |
neural plate | 1.04e-10 | 82 |
presumptive neural plate | 1.04e-10 | 82 |
gland of diencephalon | 3.79e-10 | 4 |
neuroendocrine gland | 3.79e-10 | 4 |
neurectoderm | 4.86e-10 | 86 |
pituitary gland | 5.44e-10 | 2 |
diencephalon | 6.46e-10 | 7 |
future diencephalon | 6.46e-10 | 7 |
posterior neural tube | 8.53e-10 | 15 |
chordal neural plate | 8.53e-10 | 15 |
muscle structure | 3.84e-09 | 2 |
muscle organ | 3.84e-09 | 2 |
regional part of nervous system | 1.26e-08 | 53 |
regional part of brain | 1.26e-08 | 53 |
central nervous system | 6.57e-08 | 81 |
ecto-epithelium | 1.12e-07 | 104 |
brainstem | 3.50e-07 | 6 |
structure with developmental contribution from neural crest | 4.52e-07 | 132 |
valve | 5.94e-07 | 3 |
cardiac mesenchyme | 5.94e-07 | 3 |
cardial valve | 5.94e-07 | 3 |
tunica intima | 5.94e-07 | 3 |
heart layer | 5.94e-07 | 3 |
endocardium | 5.94e-07 | 3 |
endocardial cushion | 5.94e-07 | 3 |
presumptive endocardium | 5.94e-07 | 3 |
nervous system | 7.89e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.