FFCP PHASE1:Hg19::chr12:49488554..49488568,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50846|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2865|TSSclassifier=S|UniProt=O43323|association_with_transcript=33bp_to_ENST00000266991,NM_021044,uc001rtf.2_5end|coexpression_cluster_id=C2209|description=CAGE_peak_2_at_DHH_5end|id=chr12:49488554..49488568,-|ontology_enrichment_celltype=CL:0000071!3.22e-16!18;CL:0002546!3.22e-16!18;CL:1000413!8.50e-16!9;CL:0002139!1.06e-15!24;CL:0000115!1.37e-09!35;CL:0002544!1.86e-09!6;CL:0002078!6.39e-07!44|ontology_enrichment_celltype_v019=CL:1000413;1.32e-23;9!CL:0000071;3.37e-18;18!CL:0002139;1.17e-13;24!CL:0000115;4.27e-09;36|ontology_enrichment_celltype_v019_2=CL:1000413,9.54e-24,9;CL:0000071,2.97e-18,18;CL:0002546,2.97e-18,18;CL:0002139,1.06e-13,24;CL:0000115,4.01e-09,36;CL:0002078,2.77e-07,45|ontology_enrichment_development_v019=CL:0002546;3.37e-18;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;6.66e-15;1|ontology_enrichment_disease_v019_2=DOID:9119,6.22e-15,1|ontology_enrichment_uberon=UBERON:0007023!4.84e-38!115;UBERON:0001049!3.03e-20!57;UBERON:0005068!3.03e-20!57;UBERON:0006241!3.03e-20!57;UBERON:0007135!3.03e-20!57;UBERON:0003075!3.36e-18!86;UBERON:0007284!3.36e-18!86;UBERON:0002346!5.49e-17!90;UBERON:0001986!3.22e-16!18;UBERON:0004638!3.22e-16!18;UBERON:0004852!3.22e-16!18;UBERON:0003915!8.50e-16!9;UBERON:0004700!8.50e-16!9;UBERON:0001917!8.50e-16!9;UBERON:0005743!3.79e-15!86;UBERON:0002616!1.87e-14!59;UBERON:0000073!5.06e-14!94;UBERON:0001016!5.06e-14!94;UBERON:0001017!8.42e-14!82;UBERON:0003080!1.33e-13!42;UBERON:0000025!4.23e-13!194;UBERON:0004111!7.66e-13!241;UBERON:0000487!1.09e-12!22;UBERON:0002780!2.42e-12!41;UBERON:0001890!2.42e-12!41;UBERON:0006240!2.42e-12!41;UBERON:0000477!1.12e-11!286;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0001894!7.51e-11!7;UBERON:0006222!7.51e-11!7;UBERON:0006914!8.51e-11!25;UBERON:0003056!4.85e-10!61;UBERON:0003296!1.20e-09!4;UBERON:0010133!1.20e-09!4;UBERON:0002298!1.65e-09!8;UBERON:0000483!1.47e-08!309;UBERON:0000119!2.40e-08!312;UBERON:0003076!4.34e-08!15;UBERON:0003057!4.34e-08!15;UBERON:0002240!1.16e-07!3;UBERON:0001896!1.72e-07!3;UBERON:0005290!1.72e-07!3;UBERON:0010096!1.72e-07!3;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129;UBERON:0000055!6.29e-07!69;UBERON:0000033!9.26e-07!123|ontology_enrichment_uberon_v019=UBERON:0003915;1.32e-23;9!UBERON:0004700;1.32e-23;9!UBERON:0001917;1.32e-23;9!UBERON:0004638;3.37e-18;18!UBERON:0001986;3.37e-18;18!UBERON:0004852;3.37e-18;18!UBERON:0000487;6.73e-15;22!UBERON:0003296;5.02e-14;4!UBERON:0010133;5.02e-14;4!UBERON:0006914;4.11e-13;25!UBERON:0000490;1.82e-09;33!UBERON:0001894;2.07e-08;7!UBERON:0001905;7.52e-08;2!UBERON:0000007;7.52e-08;2!UBERON:0002757;7.52e-08;2!UBERON:0010134;7.52e-08;2!UBERON:0005408;7.52e-08;2!UBERON:0001899;7.52e-08;2!UBERON:0000473;9.87e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0003915,9.54e-24,9;UBERON:0004700,9.54e-24,9;UBERON:0001917,9.54e-24,9;UBERON:0004638,2.97e-18,18;UBERON:0001986,2.97e-18,18;UBERON:0004852,2.97e-18,18;UBERON:0000487,6.07e-15,22;UBERON:0003296,5.37e-14,4;UBERON:0010133,5.37e-14,4;UBERON:0006914,3.76e-13,25;UBERON:0001894,2.15e-08,7;UBERON:0006222,2.15e-08,7;UBERON:0001905,7.52e-08,2;UBERON:0002757,7.52e-08,2;UBERON:0010134,7.52e-08,2;UBERON:0005408,7.52e-08,2;UBERON:0001899,7.52e-08,2;UBERON:0000007,8.04e-08,2;UBERON:0000473,1.00e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,0.347140501607594,0,3.35599548967925,1.37559020970034,1.67195973229448,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.446498641420399,0,0.675668882899933,0,0,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.301028434124,0,0,6.99451132795422,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.8310584095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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2865 | |||
|TSSclassifier=S | |||
|UniProt=O43323 | |||
|association_with_transcript=33bp_to_ENST00000266991,NM_021044,uc001rtf.2_5end | |||
|coexpression_cluster_id=C2209 | |||
|description=CAGE_peak_2_at_DHH_5end | |||
|id=chr12:49488554..49488568,- | |||
|ontology_enrichment_celltype=CL:0000071!3.22e-16!18;CL:0002546!3.22e-16!18;CL:1000413!8.50e-16!9;CL:0002139!1.06e-15!24;CL:0000115!1.37e-09!35;CL:0002544!1.86e-09!6;CL:0002078!6.39e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000413;1.32e-23;9!CL:0000071;3.37e-18;18!CL:0002139;1.17e-13;24!CL:0000115;4.27e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,9.54e-24,9;CL:0000071,2.97e-18,18;CL:0002546,2.97e-18,18;CL:0002139,1.06e-13,24;CL:0000115,4.01e-09,36;CL:0002078,2.77e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;3.37e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;6.66e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,6.22e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.84e-38!115;UBERON:0001049!3.03e-20!57;UBERON:0005068!3.03e-20!57;UBERON:0006241!3.03e-20!57;UBERON:0007135!3.03e-20!57;UBERON:0003075!3.36e-18!86;UBERON:0007284!3.36e-18!86;UBERON:0002346!5.49e-17!90;UBERON:0001986!3.22e-16!18;UBERON:0004638!3.22e-16!18;UBERON:0004852!3.22e-16!18;UBERON:0003915!8.50e-16!9;UBERON:0004700!8.50e-16!9;UBERON:0001917!8.50e-16!9;UBERON:0005743!3.79e-15!86;UBERON:0002616!1.87e-14!59;UBERON:0000073!5.06e-14!94;UBERON:0001016!5.06e-14!94;UBERON:0001017!8.42e-14!82;UBERON:0003080!1.33e-13!42;UBERON:0000025!4.23e-13!194;UBERON:0004111!7.66e-13!241;UBERON:0000487!1.09e-12!22;UBERON:0002780!2.42e-12!41;UBERON:0001890!2.42e-12!41;UBERON:0006240!2.42e-12!41;UBERON:0000477!1.12e-11!286;UBERON:0000955!3.34e-11!69;UBERON:0006238!3.34e-11!69;UBERON:0001894!7.51e-11!7;UBERON:0006222!7.51e-11!7;UBERON:0006914!8.51e-11!25;UBERON:0003056!4.85e-10!61;UBERON:0003296!1.20e-09!4;UBERON:0010133!1.20e-09!4;UBERON:0002298!1.65e-09!8;UBERON:0000483!1.47e-08!309;UBERON:0000119!2.40e-08!312;UBERON:0003076!4.34e-08!15;UBERON:0003057!4.34e-08!15;UBERON:0002240!1.16e-07!3;UBERON:0001896!1.72e-07!3;UBERON:0005290!1.72e-07!3;UBERON:0010096!1.72e-07!3;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129;UBERON:0000055!6.29e-07!69;UBERON:0000033!9.26e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.32e-23;9!UBERON:0004700;1.32e-23;9!UBERON:0001917;1.32e-23;9!UBERON:0004638;3.37e-18;18!UBERON:0001986;3.37e-18;18!UBERON:0004852;3.37e-18;18!UBERON:0000487;6.73e-15;22!UBERON:0003296;5.02e-14;4!UBERON:0010133;5.02e-14;4!UBERON:0006914;4.11e-13;25!UBERON:0000490;1.82e-09;33!UBERON:0001894;2.07e-08;7!UBERON:0001905;7.52e-08;2!UBERON:0000007;7.52e-08;2!UBERON:0002757;7.52e-08;2!UBERON:0010134;7.52e-08;2!UBERON:0005408;7.52e-08;2!UBERON:0001899;7.52e-08;2!UBERON:0000473;9.87e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,9.54e-24,9;UBERON:0004700,9.54e-24,9;UBERON:0001917,9.54e-24,9;UBERON:0004638,2.97e-18,18;UBERON:0001986,2.97e-18,18;UBERON:0004852,2.97e-18,18;UBERON:0000487,6.07e-15,22;UBERON:0003296,5.37e-14,4;UBERON:0010133,5.37e-14,4;UBERON:0006914,3.76e-13,25;UBERON:0001894,2.15e-08,7;UBERON:0006222,2.15e-08,7;UBERON:0001905,7.52e-08,2;UBERON:0002757,7.52e-08,2;UBERON:0010134,7.52e-08,2;UBERON:0005408,7.52e-08,2;UBERON:0001899,7.52e-08,2;UBERON:0000007,8.04e-08,2;UBERON:0000473,1.00e-07,8 | |||
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|short_description=p2@DHH | |||
}} |
Revision as of 22:52, 10 September 2013
Short description: | p2@DHH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DHH_5end |
Coexpression cluster: | C2209_acute_testis_spinal_Endothelial_rectum_heart_substantia |
Association with transcript: | 33bp_to_ENST00000266991, NM_021044, uc001rtf.2_5end |
EntrezGene: | DHH |
HGNC: | 2865 |
UniProt: | O43323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 9.54e-24 | 9 |
blood vessel endothelial cell | 2.97e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.97e-18 | 18 |
endothelial cell of vascular tree | 1.06e-13 | 24 |
endothelial cell | 4.01e-09 | 36 |
meso-epithelial cell | 2.77e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 9.54e-24 | 9 |
arterial system endothelium | 9.54e-24 | 9 |
endothelium of artery | 9.54e-24 | 9 |
blood vessel endothelium | 2.97e-18 | 18 |
endothelium | 2.97e-18 | 18 |
cardiovascular system endothelium | 2.97e-18 | 18 |
simple squamous epithelium | 6.07e-15 | 22 |
gland of diencephalon | 5.37e-14 | 4 |
neuroendocrine gland | 5.37e-14 | 4 |
squamous epithelium | 3.76e-13 | 25 |
diencephalon | 2.15e-08 | 7 |
future diencephalon | 2.15e-08 | 7 |
pineal body | 7.52e-08 | 2 |
regional part of epithalamus | 7.52e-08 | 2 |
secretory circumventricular organ | 7.52e-08 | 2 |
circumventricular organ | 7.52e-08 | 2 |
epithalamus | 7.52e-08 | 2 |
pituitary gland | 8.04e-08 | 2 |
testis | 1.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.22e-15 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.