FFCP PHASE1:Hg19::chr12:14849470..14849540,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2984|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4688|TSSclassifier=S|UniProt=P25092|association_with_transcript=0bp_to_ENST00000261170,ENST00000535803,NM_004963,uc001rcd.2,uc009zhz.2_5end|coexpression_cluster_id=C76|description=CAGE_peak_1_at_GUCY2C_5end|id=chr12:14849470..14849540,-|ontology_enrichment_celltype=CL:0002322!1.25e-10!5;CL:0002563!8.70e-07!4|ontology_enrichment_celltype_v019=CL:0002563;2.36e-10;4|ontology_enrichment_celltype_v019_2=CL:0002563,2.36e-10,4|ontology_enrichment_development_v019=UBERON:0001045;8.22e-11;1|ontology_enrichment_disease=DOID:3119!6.18e-07!14;DOID:178!6.88e-07!1;DOID:326!6.88e-07!1;DOID:3978!6.88e-07!1;DOID:3394!6.88e-07!1;DOID:5844!6.88e-07!1;DOID:2355!9.18e-07!1|ontology_enrichment_disease_v019=DOID:3119;4.22e-11;14|ontology_enrichment_disease_v019_2=DOID:3119,4.28e-11,14|ontology_enrichment_uberon=UBERON:0000059!1.04e-25!11;UBERON:0000160!8.58e-24!27;UBERON:0004907!3.68e-19!5;UBERON:0005409!4.97e-18!35;UBERON:0001155!2.01e-16!9;UBERON:0001052!6.39e-14!4;UBERON:0004921!3.34e-08!129;UBERON:0004185!3.34e-08!129;UBERON:0001046!1.43e-07!19;UBERON:0001154!3.01e-07!1;UBERON:0001153!3.01e-07!1;UBERON:0001242!8.70e-07!4;UBERON:0001262!8.70e-07!4;UBERON:0004786!8.70e-07!4;UBERON:0004808!8.70e-07!4;UBERON:0001277!8.70e-07!4|ontology_enrichment_uberon_v019=UBERON:0000160;1.53e-62;17!UBERON:0005409;1.26e-48;22!UBERON:0000059;1.29e-41;11!UBERON:0004907;2.10e-30;5!UBERON:0004921;1.84e-29;33!UBERON:0001155;2.24e-26;9!UBERON:0001052;7.64e-22;4!UBERON:0002108;2.63e-18;4!UBERON:0001555;6.39e-11;54!UBERON:0001154;8.22e-11;1!UBERON:0001153;8.22e-11;1!UBERON:0009854;8.22e-11;1!UBERON:0001007;1.88e-10;81!UBERON:0001242;2.36e-10;4!UBERON:0001262;2.36e-10;4!UBERON:0004786;2.36e-10;4!UBERON:0004808;2.36e-10;4!UBERON:0001277;2.36e-10;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.44e-62,17;UBERON:0005409,7.40e-43,25;UBERON:0000059,1.22e-41,11;UBERON:0004907,1.95e-30,5;UBERON:0001155,2.24e-26,9;UBERON:0001052,7.12e-22,4;UBERON:0002108,2.63e-18,4;UBERON:0004921,1.48e-15,118;UBERON:0001046,2.44e-12,19;UBERON:0001007,3.13e-12,145;UBERON:0001555,3.13e-12,145;UBERON:0007026,3.13e-12,145;UBERON:0004119,7.29e-11,160;UBERON:0000925,7.29e-11,160;UBERON:0006595,7.29e-11,160;UBERON:0001154,8.22e-11,1;UBERON:0001153,8.22e-11,1;UBERON:0001045,8.22e-11,1;UBERON:0001242,2.36e-10,4;UBERON:0001262,2.36e-10,4;UBERON:0004786,2.36e-10,4;UBERON:0004808,2.36e-10,4;UBERON:0001277,2.36e-10,4;UBERON:0011216,3.68e-08,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4643582731221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2697243085782,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,6.3545300572164,314.160136574282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40300221437699,0,19.9052386215701,61.2126346363107,25.0522359422786,0,0,0,0,0,0,0,0,0,0,39.9269362960591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.7629947412977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0.0824158583811665,0,1.27955725969173,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.6462677633441,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,126.565619297029,74.9659292528574,4.23285566725371,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,41.2640935602012,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,2.00822175099494,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@GUCY2C}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4688 | |||
|TSSclassifier=S | |||
|UniProt=P25092 | |||
|association_with_transcript=0bp_to_ENST00000261170,ENST00000535803,NM_004963,uc001rcd.2,uc009zhz.2_5end | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_1_at_GUCY2C_5end | |||
|id=chr12:14849470..14849540,- | |||
|ontology_enrichment_celltype=CL:0002322!1.25e-10!5;CL:0002563!8.70e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.36e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.36e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.22e-11;1 | |||
|ontology_enrichment_disease=DOID:3119!6.18e-07!14;DOID:178!6.88e-07!1;DOID:326!6.88e-07!1;DOID:3978!6.88e-07!1;DOID:3394!6.88e-07!1;DOID:5844!6.88e-07!1;DOID:2355!9.18e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.22e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.28e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000059!1.04e-25!11;UBERON:0000160!8.58e-24!27;UBERON:0004907!3.68e-19!5;UBERON:0005409!4.97e-18!35;UBERON:0001155!2.01e-16!9;UBERON:0001052!6.39e-14!4;UBERON:0004921!3.34e-08!129;UBERON:0004185!3.34e-08!129;UBERON:0001046!1.43e-07!19;UBERON:0001154!3.01e-07!1;UBERON:0001153!3.01e-07!1;UBERON:0001242!8.70e-07!4;UBERON:0001262!8.70e-07!4;UBERON:0004786!8.70e-07!4;UBERON:0004808!8.70e-07!4;UBERON:0001277!8.70e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.53e-62;17!UBERON:0005409;1.26e-48;22!UBERON:0000059;1.29e-41;11!UBERON:0004907;2.10e-30;5!UBERON:0004921;1.84e-29;33!UBERON:0001155;2.24e-26;9!UBERON:0001052;7.64e-22;4!UBERON:0002108;2.63e-18;4!UBERON:0001555;6.39e-11;54!UBERON:0001154;8.22e-11;1!UBERON:0001153;8.22e-11;1!UBERON:0009854;8.22e-11;1!UBERON:0001007;1.88e-10;81!UBERON:0001242;2.36e-10;4!UBERON:0001262;2.36e-10;4!UBERON:0004786;2.36e-10;4!UBERON:0004808;2.36e-10;4!UBERON:0001277;2.36e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.44e-62,17;UBERON:0005409,7.40e-43,25;UBERON:0000059,1.22e-41,11;UBERON:0004907,1.95e-30,5;UBERON:0001155,2.24e-26,9;UBERON:0001052,7.12e-22,4;UBERON:0002108,2.63e-18,4;UBERON:0004921,1.48e-15,118;UBERON:0001046,2.44e-12,19;UBERON:0001007,3.13e-12,145;UBERON:0001555,3.13e-12,145;UBERON:0007026,3.13e-12,145;UBERON:0004119,7.29e-11,160;UBERON:0000925,7.29e-11,160;UBERON:0006595,7.29e-11,160;UBERON:0001154,8.22e-11,1;UBERON:0001153,8.22e-11,1;UBERON:0001045,8.22e-11,1;UBERON:0001242,2.36e-10,4;UBERON:0001262,2.36e-10,4;UBERON:0004786,2.36e-10,4;UBERON:0004808,2.36e-10,4;UBERON:0001277,2.36e-10,4;UBERON:0011216,3.68e-08,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4643582731221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71351853407327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2697243085782,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,6.3545300572164,314.160136574282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40300221437699,0,19.9052386215701,61.2126346363107,25.0522359422786,0,0,0,0,0,0,0,0,0,0,39.9269362960591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.7629947412977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0.0824158583811665,0,1.27955725969173,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.6462677633441,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46301509978723,0,0,0,0,0,0,0,0,0,0,126.565619297029,74.9659292528574,4.23285566725371,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,41.2640935602012,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,2.00822175099494,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GUCY2C | |||
}} |
Revision as of 21:55, 10 September 2013
Short description: | p1@GUCY2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GUCY2C_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_ENST00000261170, ENST00000535803, NM_004963, uc001rcd.2, uc009zhz.2_5end |
EntrezGene: | GUCY2C |
HGNC: | 4688 |
UniProt: | P25092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.36e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.44e-62 | 17 |
gastrointestinal system | 7.40e-43 | 25 |
large intestine | 1.22e-41 | 11 |
lower digestive tract | 1.95e-30 | 5 |
colon | 2.24e-26 | 9 |
rectum | 7.12e-22 | 4 |
small intestine | 2.63e-18 | 4 |
subdivision of digestive tract | 1.48e-15 | 118 |
hindgut | 2.44e-12 | 19 |
digestive system | 3.13e-12 | 145 |
digestive tract | 3.13e-12 | 145 |
primitive gut | 3.13e-12 | 145 |
endoderm-derived structure | 7.29e-11 | 160 |
endoderm | 7.29e-11 | 160 |
presumptive endoderm | 7.29e-11 | 160 |
vermiform appendix | 8.22e-11 | 1 |
caecum | 8.22e-11 | 1 |
midgut | 8.22e-11 | 1 |
intestinal mucosa | 2.36e-10 | 4 |
wall of intestine | 2.36e-10 | 4 |
gastrointestinal system mucosa | 2.36e-10 | 4 |
gastrointestinal system epithelium | 2.36e-10 | 4 |
intestinal epithelium | 2.36e-10 | 4 |
organ system subdivision | 3.68e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.28e-11 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.