FFCP PHASE1:Hg19::chr12:119419286..119419293,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84530|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29389|TSSclassifier=S|UniProt=A7MD48|association_with_transcript=-6bp_to_ENST00000267260,NM_194286_5end|coexpression_cluster_id=C1657|description=CAGE_peak_4_at_SRRM4_5end|id=chr12:119419286..119419293,+|ontology_enrichment_celltype=CL:0000047!2.77e-09!8;CL:0002322!4.81e-07!5|ontology_enrichment_celltype_v019=CL:0000123;1.20e-08;2!CL:0000242;1.20e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,1.86e-08,2|ontology_enrichment_development_v019=UBERON:0006601;9.81e-16;82!UBERON:0006215;5.31e-13;3!UBERON:0006238;1.19e-08;10|ontology_enrichment_disease=DOID:171!1.26e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.90e-83!94;UBERON:0001016!8.90e-83!94;UBERON:0001017!6.61e-82!82;UBERON:0005743!2.55e-80!86;UBERON:0001049!7.05e-76!57;UBERON:0005068!7.05e-76!57;UBERON:0006241!7.05e-76!57;UBERON:0007135!7.05e-76!57;UBERON:0000955!1.33e-69!69;UBERON:0006238!1.33e-69!69;UBERON:0002616!3.54e-66!59;UBERON:0002780!1.71e-65!41;UBERON:0001890!1.71e-65!41;UBERON:0006240!1.71e-65!41;UBERON:0003080!1.03e-63!42;UBERON:0002346!1.79e-57!90;UBERON:0003075!9.33e-56!86;UBERON:0007284!9.33e-56!86;UBERON:0001893!1.39e-54!34;UBERON:0002020!2.08e-54!34;UBERON:0003528!2.08e-54!34;UBERON:0002791!2.01e-52!33;UBERON:0001869!3.69e-51!32;UBERON:0003056!1.04e-48!61;UBERON:0002619!2.30e-47!22;UBERON:0000924!3.85e-46!173;UBERON:0006601!3.85e-46!173;UBERON:0004121!2.86e-44!169;UBERON:0001950!3.12e-43!20;UBERON:0000956!4.15e-41!25;UBERON:0000203!4.15e-41!25;UBERON:0000033!1.74e-38!123;UBERON:0000153!4.71e-36!129;UBERON:0007811!4.71e-36!129;UBERON:0007023!1.33e-34!115;UBERON:0000025!3.45e-17!194;UBERON:0002420!3.60e-15!9;UBERON:0007245!3.60e-15!9;UBERON:0010009!3.60e-15!9;UBERON:0010011!3.60e-15!9;UBERON:0000454!3.60e-15!9;UBERON:0001871!5.36e-15!7;UBERON:0002308!1.82e-14!9;UBERON:0000125!1.82e-14!9;UBERON:0000200!2.36e-14!6;UBERON:0003076!1.79e-13!15;UBERON:0003057!1.79e-13!15;UBERON:0001872!1.13e-12!5;UBERON:0002021!1.66e-12!5;UBERON:0000349!3.46e-12!5;UBERON:0001894!5.51e-12!7;UBERON:0006222!5.51e-12!7;UBERON:0004111!2.30e-11!241;UBERON:0004733!4.04e-11!12;UBERON:0002028!4.04e-11!12;UBERON:0007277!4.04e-11!12;UBERON:0009663!6.41e-11!7;UBERON:0003296!1.45e-10!4;UBERON:0010133!1.45e-10!4;UBERON:0004732!3.76e-10!13;UBERON:0000483!1.22e-09!309;UBERON:0000369!1.52e-09!4;UBERON:0002435!1.52e-09!4;UBERON:0000204!1.52e-09!4;UBERON:0010082!1.52e-09!4;UBERON:0000119!2.03e-09!312;UBERON:0000064!2.91e-09!219;UBERON:0002680!4.22e-09!9;UBERON:0001895!4.22e-09!9;UBERON:0010092!4.22e-09!9;UBERON:0002298!7.21e-09!8;UBERON:0002771!2.22e-08!3;UBERON:0000475!2.63e-08!365;UBERON:0000477!2.65e-08!286;UBERON:0000013!1.27e-07!5;UBERON:0002410!1.27e-07!5;UBERON:0005383!1.69e-07!3;UBERON:0005382!1.69e-07!3;UBERON:0000922!4.78e-07!612;UBERON:0000988!5.31e-07!3;UBERON:0006331!7.04e-07!3|ontology_enrichment_uberon_v019=UBERON:0002619;2.00e-61;22!UBERON:0001950;6.78e-61;20!UBERON:0000956;9.65e-54;25!UBERON:0000203;9.65e-54;25!UBERON:0001869;6.47e-49;32!UBERON:0001893;6.34e-46;34!UBERON:0002791;3.58e-44;32!UBERON:0003528;1.82e-41;34!UBERON:0002020;1.82e-41;34!UBERON:0002780;1.42e-40;41!UBERON:0001890;1.42e-40;41!UBERON:0000073;1.70e-30;53!UBERON:0002616;1.70e-30;53!UBERON:0000955;1.71e-27;68!UBERON:0001017;1.80e-26;75!UBERON:0001016;4.53e-25;83!UBERON:0001871;4.04e-19;6!UBERON:0001872;4.91e-19;5!UBERON:0002021;6.76e-19;5!UBERON:0003296;1.16e-15;4!UBERON:0010133;1.16e-15;4!UBERON:0000200;1.57e-15;6!UBERON:0000349;3.69e-12;5!UBERON:0011216;2.20e-09;132!UBERON:0001905;2.87e-09;2!UBERON:0002757;2.87e-09;2!UBERON:0010134;2.87e-09;2!UBERON:0005408;2.87e-09;2!UBERON:0001899;2.87e-09;2!UBERON:0001894;5.64e-09;7!UBERON:0002771;9.31e-09;2!UBERON:0007023;1.05e-08;114!UBERON:0001876;1.96e-08;2!UBERON:0000007;4.06e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.93e-64,81;UBERON:0001016,6.54e-64,89;UBERON:0002619,1.22e-61,22;UBERON:0001950,3.87e-61,20;UBERON:0002780,2.24e-59,41;UBERON:0001890,2.24e-59,41;UBERON:0003080,2.24e-59,41;UBERON:0006240,2.24e-59,41;UBERON:0000955,4.34e-59,68;UBERON:0006238,4.34e-59,68;UBERON:0001049,6.15e-57,56;UBERON:0005068,6.15e-57,56;UBERON:0006241,6.15e-57,56;UBERON:0007135,6.15e-57,56;UBERON:0000073,1.62e-56,53;UBERON:0002616,1.62e-56,53;UBERON:0001869,3.39e-55,32;UBERON:0000956,6.27e-54,25;UBERON:0000203,6.27e-54,25;UBERON:0001893,1.06e-51,34;UBERON:0002791,2.57e-50,32;UBERON:0003528,4.08e-47,34;UBERON:0002020,4.08e-47,34;UBERON:0003056,2.62e-41,61;UBERON:0002346,7.87e-40,86;UBERON:0003075,1.68e-39,82;UBERON:0007284,1.68e-39,82;UBERON:0004121,1.57e-34,171;UBERON:0000924,1.57e-34,171;UBERON:0006601,1.57e-34,171;UBERON:0010371,6.08e-34,104;UBERON:0011216,2.32e-24,223;UBERON:0010314,2.45e-23,132;UBERON:0007023,1.62e-22,114;UBERON:0001871,1.71e-19,6;UBERON:0001872,5.32e-19,5;UBERON:0002021,9.71e-19,5;UBERON:0003296,1.08e-15,4;UBERON:0010133,1.08e-15,4;UBERON:0000200,1.56e-15,6;UBERON:0000025,1.57e-12,192;UBERON:0000349,2.52e-12,5;UBERON:0001905,2.88e-09,2;UBERON:0002757,2.88e-09,2;UBERON:0010134,2.88e-09,2;UBERON:0005408,2.88e-09,2;UBERON:0001899,2.88e-09,2;UBERON:0001894,5.43e-09,7;UBERON:0006222,5.43e-09,7;UBERON:0002771,8.98e-09,2;UBERON:0001876,1.13e-08,2;UBERON:0004111,1.46e-08,240;UBERON:0000007,3.78e-08,2;UBERON:0000483,4.86e-07,306;UBERON:0000119,6.74e-07,309;UBERON:0002420,8.78e-07,9;UBERON:0007245,8.78e-07,9;UBERON:0010009,8.78e-07,9;UBERON:0010011,8.78e-07,9;UBERON:0000454,8.78e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.69716365721711,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,1.67516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.85536196323703,5.98841394003583,0,0,0,0,0,0,1.03423011972439,1.74962768029953,1.38899995946634,1.77148277162768,0.844175070377856,9.15490417902499,9.28865783422287,2.06883333267483,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,2.65905343014691,0,0,0,0,0,0,4.63306494227304,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.681017030557878,0.160753148465019,0.137539436597234,0,0,0,2.67298049295309,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.19647276823534,2.3786276834235,0,0.110929051536852,0.496771223531068,3.45871587340577,0,0,0,0,4.21501415226193,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94157053998399,0.323474434190045,0.157265941855896,2.40261204022431,0,1.06287460050841,0,0,0,0,0.80057074828547,0,0,1.54150140231503,1.41696576325585,2.39450788585727,2.05116364240755,4.03314713954749,1.59061680667701,2.09918339321406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89105236931505,4.68646859168308,3.30698874401895,1.58539525484767,2.7348740450911,0,0,0.351742488719241,0,5.89272019466115,4.37168838884471,1.82089681270989,1.36597314810779,0,0,0,0.339848664884159,1.24968269769413,0,0,0,0.785577949580009,0,0,0,0,0.357382720883282,6.00451724584361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,6.15666893774403,0.905777061400041,0,0,1.41095188908457,0,0,0.588925401344836,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.97175321553653,3.9271562130634,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@SRRM4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29389 | |||
|TSSclassifier=S | |||
|UniProt=A7MD48 | |||
|association_with_transcript=-6bp_to_ENST00000267260,NM_194286_5end | |||
|coexpression_cluster_id=C1657 | |||
|description=CAGE_peak_4_at_SRRM4_5end | |||
|id=chr12:119419286..119419293,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.77e-09!8;CL:0002322!4.81e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.20e-08;2!CL:0000242;1.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.86e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.81e-16;82!UBERON:0006215;5.31e-13;3!UBERON:0006238;1.19e-08;10 | |||
|ontology_enrichment_disease=DOID:171!1.26e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@SRRM4 | |||
}} |
Revision as of 21:12, 10 September 2013
Short description: | p4@SRRM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SRRM4_5end |
Coexpression cluster: | C1657_pineal_cerebellum_temporal_occipital_duodenum_middle_brain |
Association with transcript: | -6bp_to_ENST00000267260, NM_194286_5end |
EntrezGene: | SRRM4 |
HGNC: | 29389 |
UniProt: | A7MD48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.86e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.