FFCP PHASE1:Hg19::chr11:2152641..2152652,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C172|description=CAGE_peak_at_chr11:2152641..2152652,+|id=chr11:2152641..2152652,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;1.71e-27;19!CL:0002537;8.28e-13;5!CL:0002541;1.31e-12;3!CL:0000182;2.14e-10;12!CL:0002575;4.44e-09;2!CL:0002536;4.62e-09;2|ontology_enrichment_celltype_v019_2=CL:0000349,2.40e-27,19;CL:0002537,1.09e-12,5;CL:0002541,1.50e-12,3;CL:0000182,2.22e-10,12;CL:0002575,4.28e-09,2;CL:0002536,4.63e-09,2|ontology_enrichment_development_v019=UBERON:0004161;2.86e-08;11!UBERON:0009497;5.98e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!7.83e-17!14;UBERON:0000158!7.83e-17!14;UBERON:0000478!7.30e-13!24;UBERON:0003124!1.45e-10!7;UBERON:0000305!5.25e-08!7;UBERON:0004871!7.71e-07!8|ontology_enrichment_uberon_v019=UBERON:0005631;1.35e-30;10!UBERON:0000158;1.35e-30;10!UBERON:0000478;5.29e-29;24!UBERON:0000305;6.83e-20;7!UBERON:0003124;1.31e-12;3!UBERON:0000920;1.31e-12;3!UBERON:0001987;1.67e-09;4!UBERON:0002107;1.45e-08;19!UBERON:0006925;1.45e-08;19!UBERON:0000922;2.10e-08;49|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.08e-38,14;UBERON:0000158,5.08e-38,14;UBERON:0000478,7.38e-29,24;UBERON:0003124,6.64e-20,7;UBERON:0000305,9.20e-20,7;UBERON:0004871,3.29e-17,8;UBERON:0000920,1.50e-12,3;UBERON:0004923,1.09e-09,66;UBERON:0001987,1.67e-09,4;UBERON:0004340,1.67e-09,4;UBERON:0002107,1.47e-08,19;UBERON:0006925,1.47e-08,19;UBERON:0008836,1.47e-08,19;UBERON:0008835,2.91e-07,22;UBERON:0003894,2.91e-07,22;UBERON:0009854,6.61e-07,23|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,1.74467704820074,0,0,0,0,0,8.73765488520689,8.70431028153897,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.756787138224657,2.88087962239999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0.813357600086629,0.518305275076852,1.00928340350251,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0,0.428933980974443,8.68194568626309,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0.542530047399471,1.45579603071565,1.42743191037729,0.946214490203608,0.585707074963566,0,0,0,0,0,0,4.30762546418029,18.8728883095971,0,0,0,0.606255142892519,3.32870879020994,15.4219049598137,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,5.19695633243976,0.200506470303285,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0,0.725083469571143,0.255679882248303,1.78064071293475,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0.855877976067841,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0.682499557039929,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,9.78852387424529,5.3453642549875,17.8153207217555,0,0,0,0,1.05562704063997,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0.23056390438806,0,0,20.7350753825748,1.28236630762607,94.880190131317,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,13.308978765353,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,1.58186518546373,0,0,0,0,0,0,8.79162282161373,0,0,16.4731197947486,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0,0.671834724867263,0,0,2.28471228690949,1.07140615895516,1.61768505250044,4.0355267421047,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_at_chr11:2152641..2152652,+ | |||
|id=chr11:2152641..2152652,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.71e-27;19!CL:0002537;8.28e-13;5!CL:0002541;1.31e-12;3!CL:0000182;2.14e-10;12!CL:0002575;4.44e-09;2!CL:0002536;4.62e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.40e-27,19;CL:0002537,1.09e-12,5;CL:0002541,1.50e-12,3;CL:0000182,2.22e-10,12;CL:0002575,4.28e-09,2;CL:0002536,4.63e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.86e-08;11!UBERON:0009497;5.98e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.83e-17!14;UBERON:0000158!7.83e-17!14;UBERON:0000478!7.30e-13!24;UBERON:0003124!1.45e-10!7;UBERON:0000305!5.25e-08!7;UBERON:0004871!7.71e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.35e-30;10!UBERON:0000158;1.35e-30;10!UBERON:0000478;5.29e-29;24!UBERON:0000305;6.83e-20;7!UBERON:0003124;1.31e-12;3!UBERON:0000920;1.31e-12;3!UBERON:0001987;1.67e-09;4!UBERON:0002107;1.45e-08;19!UBERON:0006925;1.45e-08;19!UBERON:0000922;2.10e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.08e-38,14;UBERON:0000158,5.08e-38,14;UBERON:0000478,7.38e-29,24;UBERON:0003124,6.64e-20,7;UBERON:0000305,9.20e-20,7;UBERON:0004871,3.29e-17,8;UBERON:0000920,1.50e-12,3;UBERON:0004923,1.09e-09,66;UBERON:0001987,1.67e-09,4;UBERON:0004340,1.67e-09,4;UBERON:0002107,1.47e-08,19;UBERON:0006925,1.47e-08,19;UBERON:0008836,1.47e-08,19;UBERON:0008835,2.91e-07,22;UBERON:0003894,2.91e-07,22;UBERON:0009854,6.61e-07,23 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,1.74467704820074,0,0,0,0,0,8.73765488520689,8.70431028153897,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.756787138224657,2.88087962239999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,2.22540236350701,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0.813357600086629,0.518305275076852,1.00928340350251,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.77236972004421,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,1.04007436911366,0.514414748524284,0,0,0.428933980974443,8.68194568626309,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.50051156317903,0.542530047399471,1.45579603071565,1.42743191037729,0.946214490203608,0.585707074963566,0,0,0,0,0,0,4.30762546418029,18.8728883095971,0,0,0,0.606255142892519,3.32870879020994,15.4219049598137,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,5.19695633243976,0.200506470303285,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0.0770153371044148,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0.275673144969061,0,0.725083469571143,0.255679882248303,1.78064071293475,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0.255897791311334,0.855877976067841,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0.682499557039929,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,9.78852387424529,5.3453642549875,17.8153207217555,0,0,0,0,1.05562704063997,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0.23056390438806,0,0,20.7350753825748,1.28236630762607,94.880190131317,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,13.308978765353,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,1.58186518546373,0,0,0,0,0,0,8.79162282161373,0,0,16.4731197947486,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0,0.671834724867263,0,0,2.28471228690949,1.07140615895516,1.61768505250044,4.0355267421047,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,3.97520666736664,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0.705351887381368,0,0,0,0,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0.994581110581374,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,4.08030902748139,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.428859265059938,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,37.1140618028224,2.4285549652957,0,7.56012945613199,0,0,0,0,0,1.74847648403166,0,0,0,0.196308467114945,0,1.6906229103336,0,0,0.257831551894309,0,0,0,0,0.730336388246517,0,0,0.473314686579554,0,0.436350690340377,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,7.61806180683969,0,0.248298857183432,0,0,2.82964064541507,0.217716747896961,45.8592623454277,0,0.143444410785353,13.6390746183865,0.0814032686109745,0,0,1.52702843581198,2.34640942403454,0,2.84827324821017,0,0,0 | |||
|short_description=p@chr11:2152641..2152652,+ | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p@chr11:2152641..2152652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:2152641..2152652, + |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.40e-27 | 19 |
amnion mesenchymal stem cell | 1.09e-12 | 5 |
chorionic membrane mesenchymal stem cell | 1.50e-12 | 3 |
hepatocyte | 2.22e-10 | 12 |
central nervous system pericyte | 4.28e-09 | 2 |
amniotic epithelial cell | 4.63e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.08e-38 | 14 |
membranous layer | 5.08e-38 | 14 |
extraembryonic structure | 7.38e-29 | 24 |
chorion | 6.64e-20 | 7 |
amnion | 9.20e-20 | 7 |
somatic layer of lateral plate mesoderm | 3.29e-17 | 8 |
egg chorion | 1.50e-12 | 3 |
organ component layer | 1.09e-09 | 66 |
placenta | 1.67e-09 | 4 |
allantois | 1.67e-09 | 4 |
liver | 1.47e-08 | 19 |
digestive gland | 1.47e-08 | 19 |
liver bud | 1.47e-08 | 19 |
hepatic diverticulum | 2.91e-07 | 22 |
liver primordium | 2.91e-07 | 22 |
digestive tract diverticulum | 6.61e-07 | 23 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.