FFCP PHASE1:Hg19::chr11:2018901..2018914,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=4713|TSSclassifier=S|UniProt=|association_with_transcript=112bp_to_ENST00000422826_5end|coexpression_cluster_id=C227|description=CAGE_peak_6_at_H19_5end|id=chr11:2018901..2018914,-|ontology_enrichment_celltype=CL:0000188!8.80e-08!9|ontology_enrichment_celltype_v019=CL:0000349;5.24e-13;19!CL:0000188;4.46e-09;9!CL:0000680;8.38e-07;7|ontology_enrichment_celltype_v019_2=CL:0000349,5.39e-13,19;CL:0000188,4.80e-09,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!6.74e-11!238;UBERON:0009142!6.74e-11!238;UBERON:0005631!8.98e-11!14;UBERON:0000158!8.98e-11!14;UBERON:0001557!2.39e-10!19;UBERON:0001737!9.31e-10!9;UBERON:0004119!1.01e-09!169;UBERON:0000925!1.01e-09!169;UBERON:0006595!1.01e-09!169;UBERON:0000481!4.51e-09!347;UBERON:0000478!1.30e-08!24;UBERON:0004921!1.42e-08!129;UBERON:0004185!1.42e-08!129;UBERON:0003124!2.26e-08!7;UBERON:0004923!7.18e-08!57;UBERON:0001007!1.14e-07!155;UBERON:0001555!1.14e-07!155;UBERON:0007026!1.14e-07!155;UBERON:0000077!1.17e-07!130;UBERON:0003103!1.65e-07!69;UBERON:0001041!1.84e-07!98|ontology_enrichment_uberon_v019=UBERON:0001134;7.28e-18;16!UBERON:0002036;7.28e-18;16!UBERON:0001737;4.87e-14;9!UBERON:0001557;4.87e-14;9!UBERON:0000478;5.88e-13;24!UBERON:0005631;1.94e-10;10!UBERON:0000158;1.94e-10;10!UBERON:0002385;3.21e-08;31!UBERON:0001015;3.21e-08;31!UBERON:0000383;3.21e-08;31!UBERON:0001987;1.10e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.20e-16,14;UBERON:0000158,3.20e-16,14;UBERON:0001737,4.85e-14,9;UBERON:0000478,6.00e-13,24;UBERON:0003124,6.17e-12,7;UBERON:0001557,7.24e-12,19;UBERON:0004119,3.12e-09,160;UBERON:0000925,3.12e-09,160;UBERON:0006595,3.12e-09,160;UBERON:0001041,4.70e-09,87;UBERON:0004921,2.54e-08,118;UBERON:0001987,1.12e-07,4;UBERON:0004340,1.12e-07,4;UBERON:0003104,3.08e-07,160;UBERON:0009142,3.08e-07,160;UBERON:0001007,6.08e-07,145;UBERON:0001555,6.08e-07,145;UBERON:0007026,6.08e-07,145|phase1_expression=2.36181893051724,2.99740733447376,0.845726424575827,4.00293193412522,2.68176656656373,25.2978171989107,0,1.26343974685366,0.783556884599516,1.22866968250754,3.48900583986214,41.7223020768629,64.6229096659711,1.11389717664042,4.97096063591874,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,1.08371286321253,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0.795285947051099,2.91980922181582,0.283604451492204,0.221729397462564,0,0.327447688744282,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,3.92474320099615,0,0,0.622422070799533,0,0.163461903113459,2.11900398702904,24.77556475264,0.70296429550139,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6935032006064,2.38420426535352,0.756962552626885,0,0,0,0,0,0,23.0698260077696,20.3987474994503,24.3421140182317,21.9485005737464,21.1343060769634,21.5916263391098,32.76400788292,23.7427972801669,33.8577498112824,0.738155454624648,5.60967095213783,4.5273141246454,36.7521778463855,1.26755034821831,0,2.95394953340702,0,0,0,0,0,0,9.44402140617002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,1.14382394926518,176.89464335761,0,0,3.19852753868291,5.543663110534,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,4.77778312003011,8.83548186966649,4.29746311775749,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,4.78496817704646,3.00102312635806,1.62759014219841,0.207970861530807,0,0,0.117141414992713,2.70851489754947,4.5481500811197,8.27784570340039,0,0,0,35.8316118156815,92.3055810051202,0,0,0,59.1098764320206,136.477060398608,110.070066772004,2.48107807818777,0.306923946576125,4.2099014164961,1.28139149255701,0.511707249066704,2.41280881715411,19.2943486378488,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.647747748306418,10.7959076883203,0,1.00337954770971,0,0,0,0,0,0,0,0,3.60643540767028,0,0,0,0,0,5.02687735119034,3.38906957652218,4.29810289233163,4.41077031950498,0.859361958946189,6.23571783831183,4.09087811597284,27.5999310504886,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,21.396949401696,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,4.59126326432643,0,0,0,0.143411352204052,2.16147890228867,0,0,0,0,0.379473173765715,2.0996083214699,0,0,0,4.14232723417828,0,1.68471475667626,1.7737206141467,0.22972340020695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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=112bp_to_ENST00000422826_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_6_at_H19_5end | |||
|id=chr11:2018901..2018914,- | |||
|ontology_enrichment_celltype=CL:0000188!8.80e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.24e-13;19!CL:0000188;4.46e-09;9!CL:0000680;8.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.39e-13,19;CL:0000188,4.80e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!6.74e-11!238;UBERON:0009142!6.74e-11!238;UBERON:0005631!8.98e-11!14;UBERON:0000158!8.98e-11!14;UBERON:0001557!2.39e-10!19;UBERON:0001737!9.31e-10!9;UBERON:0004119!1.01e-09!169;UBERON:0000925!1.01e-09!169;UBERON:0006595!1.01e-09!169;UBERON:0000481!4.51e-09!347;UBERON:0000478!1.30e-08!24;UBERON:0004921!1.42e-08!129;UBERON:0004185!1.42e-08!129;UBERON:0003124!2.26e-08!7;UBERON:0004923!7.18e-08!57;UBERON:0001007!1.14e-07!155;UBERON:0001555!1.14e-07!155;UBERON:0007026!1.14e-07!155;UBERON:0000077!1.17e-07!130;UBERON:0003103!1.65e-07!69;UBERON:0001041!1.84e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.28e-18;16!UBERON:0002036;7.28e-18;16!UBERON:0001737;4.87e-14;9!UBERON:0001557;4.87e-14;9!UBERON:0000478;5.88e-13;24!UBERON:0005631;1.94e-10;10!UBERON:0000158;1.94e-10;10!UBERON:0002385;3.21e-08;31!UBERON:0001015;3.21e-08;31!UBERON:0000383;3.21e-08;31!UBERON:0001987;1.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.20e-16,14;UBERON:0000158,3.20e-16,14;UBERON:0001737,4.85e-14,9;UBERON:0000478,6.00e-13,24;UBERON:0003124,6.17e-12,7;UBERON:0001557,7.24e-12,19;UBERON:0004119,3.12e-09,160;UBERON:0000925,3.12e-09,160;UBERON:0006595,3.12e-09,160;UBERON:0001041,4.70e-09,87;UBERON:0004921,2.54e-08,118;UBERON:0001987,1.12e-07,4;UBERON:0004340,1.12e-07,4;UBERON:0003104,3.08e-07,160;UBERON:0009142,3.08e-07,160;UBERON:0001007,6.08e-07,145;UBERON:0001555,6.08e-07,145;UBERON:0007026,6.08e-07,145 | |||
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| |||
|short_description=p6@H19 | |||
}} |
Revision as of 17:10, 10 September 2013
Short description: | p6@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 112bp_to_ENST00000422826_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.39e-13 | 19 |
cell of skeletal muscle | 4.80e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.20e-16 | 14 |
membranous layer | 3.20e-16 | 14 |
larynx | 4.85e-14 | 9 |
extraembryonic structure | 6.00e-13 | 24 |
chorion | 6.17e-12 | 7 |
upper respiratory tract | 7.24e-12 | 19 |
endoderm-derived structure | 3.12e-09 | 160 |
endoderm | 3.12e-09 | 160 |
presumptive endoderm | 3.12e-09 | 160 |
foregut | 4.70e-09 | 87 |
subdivision of digestive tract | 2.54e-08 | 118 |
placenta | 1.12e-07 | 4 |
allantois | 1.12e-07 | 4 |
mesenchyme | 3.08e-07 | 160 |
entire embryonic mesenchyme | 3.08e-07 | 160 |
digestive system | 6.08e-07 | 145 |
digestive tract | 6.08e-07 | 145 |
primitive gut | 6.08e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.