FFCP PHASE1:Hg19::chr11:2017525..2017553,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C227|description=CAGE_peak_at_chr11:2017525..2017553,+|id=chr11:2017525..2017553,+|ontology_enrichment_celltype=CL:0000188!5.58e-08!9|ontology_enrichment_celltype_v019=CL:0000349;1.09e-24;19!CL:0002577;1.87e-12;3!CL:0002536;1.60e-09;2!CL:0002575;2.33e-09;2!CL:0002537;2.26e-08;5!CL:0002541;7.58e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,9.05e-25,19;CL:0002577,1.45e-12,3;CL:0002536,1.48e-09,2;CL:0002575,2.23e-09,2;CL:0002537,2.29e-08,5;CL:0002541,7.69e-07,3|ontology_enrichment_development_v019=UBERON:0008947;4.30e-12;29!UBERON:0008814;1.26e-08;2!UBERON:0010056;1.26e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!6.23e-18!14;UBERON:0000158!6.23e-18!14;UBERON:0001737!1.10e-16!9;UBERON:0001557!3.68e-14!19;UBERON:0003124!1.00e-12!7;UBERON:0000478!1.03e-12!24;UBERON:0004923!8.05e-09!57;UBERON:0001987!7.72e-08!4;UBERON:0004340!7.72e-08!4;UBERON:0000305!2.77e-07!7;UBERON:0003104!3.95e-07!238;UBERON:0009142!3.95e-07!238|ontology_enrichment_uberon_v019=UBERON:0001737;2.54e-35;9!UBERON:0001557;2.54e-35;9!UBERON:0000478;1.28e-22;24!UBERON:0005631;2.04e-20;10!UBERON:0000158;2.04e-20;10!UBERON:0000305;3.02e-15;7!UBERON:0001723;1.39e-12;3!UBERON:0001033;1.39e-12;3!UBERON:0000072;4.07e-10;37!UBERON:0001987;1.86e-09;4!UBERON:0005406;4.38e-09;2!UBERON:0000065;5.12e-08;44!UBERON:0001004;4.54e-07;65!UBERON:0003124;7.58e-07;3!UBERON:0000920;7.58e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.26e-35,9;UBERON:0005631,2.63e-28,14;UBERON:0000158,2.63e-28,14;UBERON:0001557,2.74e-28,19;UBERON:0000478,1.17e-22,24;UBERON:0000305,2.89e-15,7;UBERON:0003124,1.06e-14,7;UBERON:0000072,1.34e-13,47;UBERON:0004871,2.58e-13,8;UBERON:0001723,1.14e-12,3;UBERON:0001033,1.14e-12,3;UBERON:0010056,1.14e-12,3;UBERON:0000065,1.98e-11,54;UBERON:0001041,1.24e-10,87;UBERON:0001987,1.54e-09,4;UBERON:0004340,1.54e-09,4;UBERON:0005406,4.47e-09,2;UBERON:0001004,7.64e-09,74;UBERON:0008947,8.79e-09,38;UBERON:0003258,8.79e-09,38;UBERON:0004921,1.32e-07,118;UBERON:0004119,1.48e-07,160;UBERON:0000925,1.48e-07,160;UBERON:0006595,1.48e-07,160;UBERON:0000920,7.69e-07,3|phase1_expression=0.54503513781167,0,0,0,0,2.61701557230111,0,0,0,0,0,4.58726881473362,7.91300934685361,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,4.25904480143438,1.85443159085912,3.61516544825223,2.75734931830985,4.13970943775572,4.27087114399974,4.1797705529651,5.101758093259,5.77120735419586,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0.925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.650783345569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0.300946099727719,0,3.10419213877515,0,0.184369168541703,0,3.72022199179207,6.17658162859541,0,0,0,3.03127571446259,1.66435439510497,3.93107381328584,0.992431231275107,0,0,0.384417447767103,0,0.160853921143607,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0.767518373630648,1.10269257987624,0,0.580066775656914,0.340906509664404,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,1.28381696410176,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6084356300483,5.04839957415486,9.82914246717543,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.977826347298073,14.3550521879364,0.457987967009312,17.0571128325963,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,6.19409789704604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_at_chr11:2017525..2017553,+ | |||
|id=chr11:2017525..2017553,+ | |||
|ontology_enrichment_celltype=CL:0000188!5.58e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.09e-24;19!CL:0002577;1.87e-12;3!CL:0002536;1.60e-09;2!CL:0002575;2.33e-09;2!CL:0002537;2.26e-08;5!CL:0002541;7.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.05e-25,19;CL:0002577,1.45e-12,3;CL:0002536,1.48e-09,2;CL:0002575,2.23e-09,2;CL:0002537,2.29e-08,5;CL:0002541,7.69e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.30e-12;29!UBERON:0008814;1.26e-08;2!UBERON:0010056;1.26e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.23e-18!14;UBERON:0000158!6.23e-18!14;UBERON:0001737!1.10e-16!9;UBERON:0001557!3.68e-14!19;UBERON:0003124!1.00e-12!7;UBERON:0000478!1.03e-12!24;UBERON:0004923!8.05e-09!57;UBERON:0001987!7.72e-08!4;UBERON:0004340!7.72e-08!4;UBERON:0000305!2.77e-07!7;UBERON:0003104!3.95e-07!238;UBERON:0009142!3.95e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.54e-35;9!UBERON:0001557;2.54e-35;9!UBERON:0000478;1.28e-22;24!UBERON:0005631;2.04e-20;10!UBERON:0000158;2.04e-20;10!UBERON:0000305;3.02e-15;7!UBERON:0001723;1.39e-12;3!UBERON:0001033;1.39e-12;3!UBERON:0000072;4.07e-10;37!UBERON:0001987;1.86e-09;4!UBERON:0005406;4.38e-09;2!UBERON:0000065;5.12e-08;44!UBERON:0001004;4.54e-07;65!UBERON:0003124;7.58e-07;3!UBERON:0000920;7.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.26e-35,9;UBERON:0005631,2.63e-28,14;UBERON:0000158,2.63e-28,14;UBERON:0001557,2.74e-28,19;UBERON:0000478,1.17e-22,24;UBERON:0000305,2.89e-15,7;UBERON:0003124,1.06e-14,7;UBERON:0000072,1.34e-13,47;UBERON:0004871,2.58e-13,8;UBERON:0001723,1.14e-12,3;UBERON:0001033,1.14e-12,3;UBERON:0010056,1.14e-12,3;UBERON:0000065,1.98e-11,54;UBERON:0001041,1.24e-10,87;UBERON:0001987,1.54e-09,4;UBERON:0004340,1.54e-09,4;UBERON:0005406,4.47e-09,2;UBERON:0001004,7.64e-09,74;UBERON:0008947,8.79e-09,38;UBERON:0003258,8.79e-09,38;UBERON:0004921,1.32e-07,118;UBERON:0004119,1.48e-07,160;UBERON:0000925,1.48e-07,160;UBERON:0006595,1.48e-07,160;UBERON:0000920,7.69e-07,3 | |||
|phase1_expression=0.54503513781167,0,0,0,0,2.61701557230111,0,0,0,0,0,4.58726881473362,7.91300934685361,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,4.25904480143438,1.85443159085912,3.61516544825223,2.75734931830985,4.13970943775572,4.27087114399974,4.1797705529651,5.101758093259,5.77120735419586,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0.925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.650783345569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,0,0,0,0,0.300946099727719,0,3.10419213877515,0,0.184369168541703,0,3.72022199179207,6.17658162859541,0,0,0,3.03127571446259,1.66435439510497,3.93107381328584,0.992431231275107,0,0,0.384417447767103,0,0.160853921143607,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.154048617114644,0.767518373630648,1.10269257987624,0,0.580066775656914,0.340906509664404,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,1.28381696410176,0,0,0,0,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6084356300483,5.04839957415486,9.82914246717543,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.977826347298073,14.3550521879364,0.457987967009312,17.0571128325963,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.63093176758547,0,0,0,0,0.394584402849391,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,6.19409789704604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,2.88814165375846,0,0,0,0,0,0,3.66669372273991,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0.45120521581504,0,0,0,0,1.46067277649303,0,0,0,0,0,1.0580536810308,0,0,3.02838593486652,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.714193294391221,0,0,0,0.0636471582781649,0.808468755832877,1.30630048738177,6.50243272062034,0.134704106029175,0,2.66128285236811,0,0,0,0,2.34640942403454,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr11:2017525..2017553,+ | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p@chr11:2017525..2017553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:2017525..2017553, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.05e-25 | 19 |
placental epithelial cell | 1.45e-12 | 3 |
amniotic epithelial cell | 1.48e-09 | 2 |
central nervous system pericyte | 2.23e-09 | 2 |
amnion mesenchymal stem cell | 2.29e-08 | 5 |
chorionic membrane mesenchymal stem cell | 7.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.26e-35 | 9 |
extraembryonic membrane | 2.63e-28 | 14 |
membranous layer | 2.63e-28 | 14 |
upper respiratory tract | 2.74e-28 | 19 |
extraembryonic structure | 1.17e-22 | 24 |
amnion | 2.89e-15 | 7 |
chorion | 1.06e-14 | 7 |
segment of respiratory tract | 1.34e-13 | 47 |
somatic layer of lateral plate mesoderm | 2.58e-13 | 8 |
tongue | 1.14e-12 | 3 |
gustatory system | 1.14e-12 | 3 |
future tongue | 1.14e-12 | 3 |
respiratory tract | 1.98e-11 | 54 |
foregut | 1.24e-10 | 87 |
placenta | 1.54e-09 | 4 |
allantois | 1.54e-09 | 4 |
perirenal fat | 4.47e-09 | 2 |
respiratory system | 7.64e-09 | 74 |
respiratory primordium | 8.79e-09 | 38 |
endoderm of foregut | 8.79e-09 | 38 |
subdivision of digestive tract | 1.32e-07 | 118 |
endoderm-derived structure | 1.48e-07 | 160 |
endoderm | 1.48e-07 | 160 |
presumptive endoderm | 1.48e-07 | 160 |
egg chorion | 7.69e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.