FFCP PHASE1:Hg19::chr11:2017331..2017342,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=4713|TSSclassifier=S|UniProt=|association_with_transcript=78bp_to_ENST00000442037_5end|coexpression_cluster_id=C227|description=CAGE_peak_30_at_H19_5end|id=chr11:2017331..2017342,-|ontology_enrichment_celltype=CL:0000188!8.00e-07!9|ontology_enrichment_celltype_v019=CL:0000349;1.43e-25;19!CL:0002577;6.83e-12;3!CL:0002541;1.29e-11;3!CL:0002536;2.87e-08;2!CL:0002575;3.61e-08;2!CL:0002537;2.11e-07;5|ontology_enrichment_celltype_v019_2=CL:0000349,1.52e-25,19;CL:0002577,6.60e-12,3;CL:0002541,1.49e-11,3;CL:0002536,2.72e-08,2;CL:0002575,3.74e-08,2;CL:0002537,2.16e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.55e-16!14;UBERON:0000158!1.55e-16!14;UBERON:0001737!6.35e-14!9;UBERON:0003124!3.57e-12!7;UBERON:0001557!1.45e-11!19;UBERON:0000478!1.59e-11!24;UBERON:0004923!3.90e-10!57;UBERON:0003104!7.44e-09!238;UBERON:0009142!7.44e-09!238;UBERON:0000077!2.69e-08!130;UBERON:0003688!3.84e-08!6;UBERON:0002358!3.84e-08!6;UBERON:0003684!3.84e-08!6;UBERON:0001178!3.84e-08!6;UBERON:0001041!6.69e-08!98;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0004921!2.10e-07!129;UBERON:0004185!2.10e-07!129;UBERON:0002100!6.05e-07!216|ontology_enrichment_uberon_v019=UBERON:0000478;1.04e-26;24!UBERON:0001737;7.62e-23;9!UBERON:0001557;7.62e-23;9!UBERON:0005631;1.59e-22;10!UBERON:0000158;1.59e-22;10!UBERON:0001987;1.20e-14;4!UBERON:0000305;3.22e-13;7!UBERON:0003124;1.29e-11;3!UBERON:0000920;1.29e-11;3!UBERON:0005406;3.67e-08;2!UBERON:0000341;2.98e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.26e-35,14;UBERON:0000158,3.26e-35,14;UBERON:0000478,9.33e-27,24;UBERON:0003124,1.36e-24,7;UBERON:0001737,8.48e-23,9;UBERON:0001557,4.88e-16,19;UBERON:0001987,8.78e-15,4;UBERON:0004340,8.78e-15,4;UBERON:0000305,3.19e-13,7;UBERON:0000920,1.49e-11,3;UBERON:0004871,1.61e-11,8;UBERON:0005406,3.61e-08,2;UBERON:0004923,2.12e-07,66;UBERON:0000341,3.40e-07,2|phase1_expression=1.2717486548939,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,6.10636966870258,0,0,0,0,0,5.89791704751465,8.44054330331051,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0.311211035399766,0,0.326923806226917,0.756787138224657,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,3.07597680103594,1.68584690078102,2.41011029883482,2.53676137284506,2.17879444092406,2.13543557199987,2.83145747136345,0.784885860501384,4.61696588335668,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,36.8982691666181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,5.48243240895674,5.83343820478455,0,0,0,15.4595061437592,44.9375686678342,6.65258645325297,0.496215615637554,0.153461973288062,1.40330047216537,0.768834895534206,0.511707249066704,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.676695028044854,0.616194468458578,0.460511024178389,0.275673144969061,0.322260734604821,0,0.255679882248303,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,2.99557291623744,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.770770172179,16.0360927649625,82.9333895667927,0,0,0,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,1.70539524378567,1.62971057883012,14.3550521879364,2.28993983504656,76.7570077466834,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8670188297685,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,20.7801993965415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENST00000442037_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_30_at_H19_5end | |||
|id=chr11:2017331..2017342,- | |||
|ontology_enrichment_celltype=CL:0000188!8.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.43e-25;19!CL:0002577;6.83e-12;3!CL:0002541;1.29e-11;3!CL:0002536;2.87e-08;2!CL:0002575;3.61e-08;2!CL:0002537;2.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.52e-25,19;CL:0002577,6.60e-12,3;CL:0002541,1.49e-11,3;CL:0002536,2.72e-08,2;CL:0002575,3.74e-08,2;CL:0002537,2.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.55e-16!14;UBERON:0000158!1.55e-16!14;UBERON:0001737!6.35e-14!9;UBERON:0003124!3.57e-12!7;UBERON:0001557!1.45e-11!19;UBERON:0000478!1.59e-11!24;UBERON:0004923!3.90e-10!57;UBERON:0003104!7.44e-09!238;UBERON:0009142!7.44e-09!238;UBERON:0000077!2.69e-08!130;UBERON:0003688!3.84e-08!6;UBERON:0002358!3.84e-08!6;UBERON:0003684!3.84e-08!6;UBERON:0001178!3.84e-08!6;UBERON:0001041!6.69e-08!98;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0004921!2.10e-07!129;UBERON:0004185!2.10e-07!129;UBERON:0002100!6.05e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.04e-26;24!UBERON:0001737;7.62e-23;9!UBERON:0001557;7.62e-23;9!UBERON:0005631;1.59e-22;10!UBERON:0000158;1.59e-22;10!UBERON:0001987;1.20e-14;4!UBERON:0000305;3.22e-13;7!UBERON:0003124;1.29e-11;3!UBERON:0000920;1.29e-11;3!UBERON:0005406;3.67e-08;2!UBERON:0000341;2.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.26e-35,14;UBERON:0000158,3.26e-35,14;UBERON:0000478,9.33e-27,24;UBERON:0003124,1.36e-24,7;UBERON:0001737,8.48e-23,9;UBERON:0001557,4.88e-16,19;UBERON:0001987,8.78e-15,4;UBERON:0004340,8.78e-15,4;UBERON:0000305,3.19e-13,7;UBERON:0000920,1.49e-11,3;UBERON:0004871,1.61e-11,8;UBERON:0005406,3.61e-08,2;UBERON:0004923,2.12e-07,66;UBERON:0000341,3.40e-07,2 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,6.10636966870258,0,0,0,0,0,5.89791704751465,8.44054330331051,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0.311211035399766,0,0.326923806226917,0.756787138224657,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,0,0,0,3.07597680103594,1.68584690078102,2.41011029883482,2.53676137284506,2.17879444092406,2.13543557199987,2.83145747136345,0.784885860501384,4.61696588335668,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,36.8982691666181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,5.48243240895674,5.83343820478455,0,0,0,15.4595061437592,44.9375686678342,6.65258645325297,0.496215615637554,0.153461973288062,1.40330047216537,0.768834895534206,0.511707249066704,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.676695028044854,0.616194468458578,0.460511024178389,0.275673144969061,0.322260734604821,0,0.255679882248303,2.67096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,2.99557291623744,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.770770172179,16.0360927649625,82.9333895667927,0,0,0,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,1.70539524378567,1.62971057883012,14.3550521879364,2.28993983504656,76.7570077466834,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8670188297685,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,20.7801993965415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95041333473328,0,0,0,0,0,0.78602152549833,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0004164699473,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,4.04339831526184,0,0,0,0.150420656698515,0,0,4.45241380618418,0,0,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,1.86274977341542,0,0.171488009437418,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,1.3746412112643,0,0,0,0,0,0.647428837187895,0.307988420568741,8.11870101936739,2.91426595835484,0,0,0,0,0,0,0,1.09279780251979,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0.644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,3.1741610430924,0,0,2.59575937274273,0,0,0.126698501011437,0,0,0,0,0,0,0,0,1.0661699095049,1.66645102024618,0,0.0620747142958579,0,0.0636471582781649,1.21270313374932,0.653150243690884,14.0315653444965,0,0.0717222053926763,0.99798106963804,0.0814032686109745,0,0,0,11.7320471201727,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p30@H19 | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p30@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 78bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.52e-25 | 19 |
placental epithelial cell | 6.60e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.49e-11 | 3 |
amniotic epithelial cell | 2.72e-08 | 2 |
central nervous system pericyte | 3.74e-08 | 2 |
amnion mesenchymal stem cell | 2.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.26e-35 | 14 |
membranous layer | 3.26e-35 | 14 |
extraembryonic structure | 9.33e-27 | 24 |
chorion | 1.36e-24 | 7 |
larynx | 8.48e-23 | 9 |
upper respiratory tract | 4.88e-16 | 19 |
placenta | 8.78e-15 | 4 |
allantois | 8.78e-15 | 4 |
amnion | 3.19e-13 | 7 |
egg chorion | 1.49e-11 | 3 |
somatic layer of lateral plate mesoderm | 1.61e-11 | 8 |
perirenal fat | 3.61e-08 | 2 |
organ component layer | 2.12e-07 | 66 |
throat | 3.40e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.