FFCP PHASE1:Hg19::chr11:18291491..18291492,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-90bp_to_CU675502_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_CU675502_5end|id=chr11:18291491..18291492,-|ontology_enrichment_celltype=CL:0002615!7.30e-17!3;CL:0002621!1.61e-16!3;CL:0000181!4.09e-16!12;CL:0000417!4.09e-16!12;CL:0000668!4.09e-16!12;CL:0000414!4.09e-16!12;CL:0000412!4.09e-16!12;CL:0000182!4.09e-16!12;CL:0000319!4.77e-13!1;CL:0000223!3.48e-09!59;CL:0000136!1.14e-07!15;CL:0000159!3.70e-07!2;CL:0002617!3.93e-07!2;CL:0000054!4.17e-07!2;CL:0000137!4.17e-07!2;CL:0000092!4.17e-07!2|ontology_enrichment_celltype_v019=CL:0000182;2.58e-30;12!CL:0002615;1.83e-14;3|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0002615,2.09e-14,3;CL:0000223,6.02e-07,58|ontology_enrichment_development_v019=CL:0000223;6.76e-07;58|ontology_enrichment_disease=DOID:3030!4.77e-13!1;DOID:0060085!6.06e-13!1;DOID:3165!6.06e-13!1;DOID:0060121!6.06e-13!1;DOID:2438!6.06e-13!1;DOID:4418!6.06e-13!1;DOID:200!4.17e-07!2;DOID:4305!4.17e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001949!1.61e-16!3;UBERON:0002107!1.22e-15!19;UBERON:0006925!1.22e-15!19;UBERON:0008836!1.22e-15!19;UBERON:0008835!1.67e-13!22;UBERON:0003894!1.67e-13!22;UBERON:0002365!2.16e-13!31;UBERON:0002330!2.16e-13!31;UBERON:0009854!6.51e-13!23;UBERON:0002363!8.64e-13!1;UBERON:0007647!8.64e-13!1;UBERON:0010115!8.64e-13!1;UBERON:0001282!9.73e-13!1;UBERON:0009842!9.73e-13!1;UBERON:0003704!9.73e-13!1;UBERON:0001171!9.73e-13!1;UBERON:0001172!9.73e-13!1;UBERON:0007499!7.10e-12!25;UBERON:0009497!7.10e-12!25;UBERON:0000015!7.10e-12!25;UBERON:0002423!7.10e-12!25;UBERON:0006235!7.10e-12!25;UBERON:0004161!7.10e-12!25;UBERON:0005057!2.05e-11!26;UBERON:0009856!2.05e-11!26;UBERON:0003929!3.88e-10!54;UBERON:0002417!5.89e-09!61;UBERON:0000916!5.89e-09!61;UBERON:0003688!6.77e-09!6;UBERON:0002358!6.77e-09!6;UBERON:0003684!6.77e-09!6;UBERON:0001178!6.77e-09!6;UBERON:0002368!1.87e-08!35;UBERON:0002360!4.98e-07!2;UBERON:0000094!4.98e-07!2;UBERON:0007645!4.98e-07!2;UBERON:0002530!7.43e-07!59;UBERON:0001828!9.38e-07!8|ontology_enrichment_uberon_v019=UBERON:0002107;7.67e-34;19!UBERON:0006925;7.67e-34;19!UBERON:0002423;6.14e-26;25!UBERON:0002365;9.28e-22;31!UBERON:0002330;9.28e-22;31!UBERON:0002368;1.72e-17;33!UBERON:0000949;1.17e-14;43!UBERON:0005172;9.07e-11;52!UBERON:0005173;9.07e-11;52!UBERON:0002530;4.41e-08;57!UBERON:0001007;6.36e-08;81!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0002417;8.51e-08;58!UBERON:0000916;8.51e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0009569,1.80e-09,112;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0005177,6.11e-07,101|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_CU675502_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_CU675502_5end | |||
|id=chr11:18291491..18291492,- | |||
|ontology_enrichment_celltype=CL:0002615!7.30e-17!3;CL:0002621!1.61e-16!3;CL:0000181!4.09e-16!12;CL:0000417!4.09e-16!12;CL:0000668!4.09e-16!12;CL:0000414!4.09e-16!12;CL:0000412!4.09e-16!12;CL:0000182!4.09e-16!12;CL:0000319!4.77e-13!1;CL:0000223!3.48e-09!59;CL:0000136!1.14e-07!15;CL:0000159!3.70e-07!2;CL:0002617!3.93e-07!2;CL:0000054!4.17e-07!2;CL:0000137!4.17e-07!2;CL:0000092!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.58e-30;12!CL:0002615;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0002615,2.09e-14,3;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.76e-07;58 | |||
|ontology_enrichment_disease=DOID:3030!4.77e-13!1;DOID:0060085!6.06e-13!1;DOID:3165!6.06e-13!1;DOID:0060121!6.06e-13!1;DOID:2438!6.06e-13!1;DOID:4418!6.06e-13!1;DOID:200!4.17e-07!2;DOID:4305!4.17e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.61e-16!3;UBERON:0002107!1.22e-15!19;UBERON:0006925!1.22e-15!19;UBERON:0008836!1.22e-15!19;UBERON:0008835!1.67e-13!22;UBERON:0003894!1.67e-13!22;UBERON:0002365!2.16e-13!31;UBERON:0002330!2.16e-13!31;UBERON:0009854!6.51e-13!23;UBERON:0002363!8.64e-13!1;UBERON:0007647!8.64e-13!1;UBERON:0010115!8.64e-13!1;UBERON:0001282!9.73e-13!1;UBERON:0009842!9.73e-13!1;UBERON:0003704!9.73e-13!1;UBERON:0001171!9.73e-13!1;UBERON:0001172!9.73e-13!1;UBERON:0007499!7.10e-12!25;UBERON:0009497!7.10e-12!25;UBERON:0000015!7.10e-12!25;UBERON:0002423!7.10e-12!25;UBERON:0006235!7.10e-12!25;UBERON:0004161!7.10e-12!25;UBERON:0005057!2.05e-11!26;UBERON:0009856!2.05e-11!26;UBERON:0003929!3.88e-10!54;UBERON:0002417!5.89e-09!61;UBERON:0000916!5.89e-09!61;UBERON:0003688!6.77e-09!6;UBERON:0002358!6.77e-09!6;UBERON:0003684!6.77e-09!6;UBERON:0001178!6.77e-09!6;UBERON:0002368!1.87e-08!35;UBERON:0002360!4.98e-07!2;UBERON:0000094!4.98e-07!2;UBERON:0007645!4.98e-07!2;UBERON:0002530!7.43e-07!59;UBERON:0001828!9.38e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.67e-34;19!UBERON:0006925;7.67e-34;19!UBERON:0002423;6.14e-26;25!UBERON:0002365;9.28e-22;31!UBERON:0002330;9.28e-22;31!UBERON:0002368;1.72e-17;33!UBERON:0000949;1.17e-14;43!UBERON:0005172;9.07e-11;52!UBERON:0005173;9.07e-11;52!UBERON:0002530;4.41e-08;57!UBERON:0001007;6.36e-08;81!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0002417;8.51e-08;58!UBERON:0000916;8.51e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0009569,1.80e-09,112;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0005177,6.11e-07,101 | |||
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|short_description=p5@CU675502 | |||
}} |
Revision as of 17:00, 10 September 2013
Short description: | p5@CU675502 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CU675502_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -90bp_to_CU675502_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-30 | 12 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
abdominal segment of trunk | 4.10e-17 | 60 |
abdomen | 4.10e-17 | 60 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
subdivision of trunk | 1.80e-09 | 112 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
trunk region element | 6.11e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.