FFCP PHASE1:Hg19::chr11:16419037..16419064,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55553|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16421|TSSclassifier=S|UniProt=E9PQL4|association_with_transcript=43bp_to_ENST00000533411_5end|coexpression_cluster_id=C25|description=CAGE_peak_3_at_SOX6_5end|id=chr11:16419037..16419064,-|ontology_enrichment_celltype=CL:0000181!1.11e-13!12;CL:0000417!1.11e-13!12;CL:0000668!1.11e-13!12;CL:0000414!1.11e-13!12;CL:0000412!1.11e-13!12;CL:0000182!1.11e-13!12|ontology_enrichment_celltype_v019=CL:0000182;2.28e-09;12!CL:0002563;5.35e-08;4|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-09,12;CL:0002563,5.26e-08,4|ontology_enrichment_development_v019=UBERON:0003104;1.83e-16;31!UBERON:0004161;2.22e-15;11!UBERON:0009497;5.42e-13;13!UBERON:0006242;2.89e-08;1!UBERON:0003918;7.80e-07;10!UBERON:0007687;7.80e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.45e-20!55;UBERON:0005173!2.45e-20!55;UBERON:0002417!7.75e-18!61;UBERON:0000916!7.75e-18!61;UBERON:0005177!2.86e-15!107;UBERON:0002107!1.31e-13!19;UBERON:0006925!1.31e-13!19;UBERON:0008836!1.31e-13!19;UBERON:0009569!9.13e-13!113;UBERON:0009497!2.38e-12!25;UBERON:0000015!2.38e-12!25;UBERON:0002423!2.38e-12!25;UBERON:0006235!2.38e-12!25;UBERON:0004161!2.38e-12!25;UBERON:0008835!1.62e-11!22;UBERON:0003894!1.62e-11!22;UBERON:0009854!6.12e-11!23;UBERON:0004921!7.96e-11!129;UBERON:0004185!7.96e-11!129;UBERON:0000466!1.15e-10!126;UBERON:0007499!6.29e-10!25;UBERON:0002368!7.77e-10!35;UBERON:0005057!1.76e-09!26;UBERON:0009856!1.76e-09!26;UBERON:0000160!2.76e-09!27;UBERON:0001007!6.13e-09!155;UBERON:0001555!6.13e-09!155;UBERON:0007026!6.13e-09!155;UBERON:0002113!9.79e-09!27;UBERON:0003918!9.79e-09!27;UBERON:0005095!9.79e-09!27;UBERON:0007687!9.79e-09!27;UBERON:0000949!1.14e-08!45;UBERON:0004119!1.77e-08!169;UBERON:0000925!1.77e-08!169;UBERON:0006595!1.77e-08!169;UBERON:0005911!2.22e-08!82;UBERON:0003929!2.47e-08!54;UBERON:0000481!8.00e-08!347;UBERON:0007023!8.22e-08!115;UBERON:0002365!1.11e-07!31;UBERON:0002330!1.11e-07!31;UBERON:0000489!4.04e-07!32;UBERON:0005409!7.79e-07!35|ontology_enrichment_uberon_v019=UBERON:0000160;3.77e-24;17!UBERON:0005409;1.17e-18;22!UBERON:0002108;9.12e-14;4!UBERON:0002423;1.33e-12;25!UBERON:0002107;1.83e-12;19!UBERON:0006925;1.83e-12;19!UBERON:0004921;8.50e-12;33!UBERON:0000059;2.34e-10;11!UBERON:0006947;6.51e-10;3!UBERON:0004054;6.51e-10;3!UBERON:0001301;3.97e-08;1!UBERON:0001007;4.15e-08;81!UBERON:0001242;5.35e-08;4!UBERON:0001262;5.35e-08;4!UBERON:0004786;5.35e-08;4!UBERON:0004808;5.35e-08;4!UBERON:0001277;5.35e-08;4!UBERON:0001000;5.62e-08;1!UBERON:0005352;5.62e-08;1!UBERON:0001052;9.46e-08;4!UBERON:0005904;1.20e-07;4!UBERON:0001155;1.22e-07;9!UBERON:0002365;1.73e-07;31!UBERON:0002330;1.73e-07;31!UBERON:0005172;1.93e-07;52!UBERON:0005173;1.93e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.34e-24,17;UBERON:0005409,2.06e-16,25;UBERON:0002108,8.93e-14,4;UBERON:0005172,2.14e-13,54;UBERON:0005173,2.14e-13,54;UBERON:0009497,1.46e-12,25;UBERON:0000015,1.46e-12,25;UBERON:0002423,1.46e-12,25;UBERON:0006235,1.46e-12,25;UBERON:0004161,1.46e-12,25;UBERON:0002107,2.03e-12,19;UBERON:0006925,2.03e-12,19;UBERON:0008836,2.03e-12,19;UBERON:0002417,7.29e-12,60;UBERON:0000916,7.29e-12,60;UBERON:0004921,8.00e-12,118;UBERON:0003929,5.11e-11,54;UBERON:0008835,1.17e-10,22;UBERON:0003894,1.17e-10,22;UBERON:0001007,2.02e-10,145;UBERON:0001555,2.02e-10,145;UBERON:0007026,2.02e-10,145;UBERON:0000059,2.15e-10,11;UBERON:0009854,3.58e-10,23;UBERON:0006947,6.81e-10,3;UBERON:0004054,6.81e-10,3;UBERON:0007499,2.56e-09,25;UBERON:0004119,3.83e-09,160;UBERON:0000925,3.83e-09,160;UBERON:0006595,3.83e-09,160;UBERON:0005177,4.82e-09,101;UBERON:0009856,6.11e-09,26;UBERON:0005911,3.49e-08,82;UBERON:0001301,4.11e-08,1;UBERON:0001242,5.26e-08,4;UBERON:0001262,5.26e-08,4;UBERON:0004786,5.26e-08,4;UBERON:0004808,5.26e-08,4;UBERON:0001277,5.26e-08,4;UBERON:0001000,5.82e-08,1;UBERON:0005352,5.82e-08,1;UBERON:0001052,8.25e-08,4;UBERON:0001155,1.22e-07,9;UBERON:0005904,1.24e-07,4;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,2.36315962672562,0,12.6678091699407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.746642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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |||
|TSSclassifier=S | |||
|UniProt=E9PQL4 | |||
|association_with_transcript=43bp_to_ENST00000533411_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_SOX6_5end | |||
|id=chr11:16419037..16419064,- | |||
|ontology_enrichment_celltype=CL:0000181!1.11e-13!12;CL:0000417!1.11e-13!12;CL:0000668!1.11e-13!12;CL:0000414!1.11e-13!12;CL:0000412!1.11e-13!12;CL:0000182!1.11e-13!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.28e-09;12!CL:0002563;5.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-09,12;CL:0002563,5.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.83e-16;31!UBERON:0004161;2.22e-15;11!UBERON:0009497;5.42e-13;13!UBERON:0006242;2.89e-08;1!UBERON:0003918;7.80e-07;10!UBERON:0007687;7.80e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.45e-20!55;UBERON:0005173!2.45e-20!55;UBERON:0002417!7.75e-18!61;UBERON:0000916!7.75e-18!61;UBERON:0005177!2.86e-15!107;UBERON:0002107!1.31e-13!19;UBERON:0006925!1.31e-13!19;UBERON:0008836!1.31e-13!19;UBERON:0009569!9.13e-13!113;UBERON:0009497!2.38e-12!25;UBERON:0000015!2.38e-12!25;UBERON:0002423!2.38e-12!25;UBERON:0006235!2.38e-12!25;UBERON:0004161!2.38e-12!25;UBERON:0008835!1.62e-11!22;UBERON:0003894!1.62e-11!22;UBERON:0009854!6.12e-11!23;UBERON:0004921!7.96e-11!129;UBERON:0004185!7.96e-11!129;UBERON:0000466!1.15e-10!126;UBERON:0007499!6.29e-10!25;UBERON:0002368!7.77e-10!35;UBERON:0005057!1.76e-09!26;UBERON:0009856!1.76e-09!26;UBERON:0000160!2.76e-09!27;UBERON:0001007!6.13e-09!155;UBERON:0001555!6.13e-09!155;UBERON:0007026!6.13e-09!155;UBERON:0002113!9.79e-09!27;UBERON:0003918!9.79e-09!27;UBERON:0005095!9.79e-09!27;UBERON:0007687!9.79e-09!27;UBERON:0000949!1.14e-08!45;UBERON:0004119!1.77e-08!169;UBERON:0000925!1.77e-08!169;UBERON:0006595!1.77e-08!169;UBERON:0005911!2.22e-08!82;UBERON:0003929!2.47e-08!54;UBERON:0000481!8.00e-08!347;UBERON:0007023!8.22e-08!115;UBERON:0002365!1.11e-07!31;UBERON:0002330!1.11e-07!31;UBERON:0000489!4.04e-07!32;UBERON:0005409!7.79e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.77e-24;17!UBERON:0005409;1.17e-18;22!UBERON:0002108;9.12e-14;4!UBERON:0002423;1.33e-12;25!UBERON:0002107;1.83e-12;19!UBERON:0006925;1.83e-12;19!UBERON:0004921;8.50e-12;33!UBERON:0000059;2.34e-10;11!UBERON:0006947;6.51e-10;3!UBERON:0004054;6.51e-10;3!UBERON:0001301;3.97e-08;1!UBERON:0001007;4.15e-08;81!UBERON:0001242;5.35e-08;4!UBERON:0001262;5.35e-08;4!UBERON:0004786;5.35e-08;4!UBERON:0004808;5.35e-08;4!UBERON:0001277;5.35e-08;4!UBERON:0001000;5.62e-08;1!UBERON:0005352;5.62e-08;1!UBERON:0001052;9.46e-08;4!UBERON:0005904;1.20e-07;4!UBERON:0001155;1.22e-07;9!UBERON:0002365;1.73e-07;31!UBERON:0002330;1.73e-07;31!UBERON:0005172;1.93e-07;52!UBERON:0005173;1.93e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.34e-24,17;UBERON:0005409,2.06e-16,25;UBERON:0002108,8.93e-14,4;UBERON:0005172,2.14e-13,54;UBERON:0005173,2.14e-13,54;UBERON:0009497,1.46e-12,25;UBERON:0000015,1.46e-12,25;UBERON:0002423,1.46e-12,25;UBERON:0006235,1.46e-12,25;UBERON:0004161,1.46e-12,25;UBERON:0002107,2.03e-12,19;UBERON:0006925,2.03e-12,19;UBERON:0008836,2.03e-12,19;UBERON:0002417,7.29e-12,60;UBERON:0000916,7.29e-12,60;UBERON:0004921,8.00e-12,118;UBERON:0003929,5.11e-11,54;UBERON:0008835,1.17e-10,22;UBERON:0003894,1.17e-10,22;UBERON:0001007,2.02e-10,145;UBERON:0001555,2.02e-10,145;UBERON:0007026,2.02e-10,145;UBERON:0000059,2.15e-10,11;UBERON:0009854,3.58e-10,23;UBERON:0006947,6.81e-10,3;UBERON:0004054,6.81e-10,3;UBERON:0007499,2.56e-09,25;UBERON:0004119,3.83e-09,160;UBERON:0000925,3.83e-09,160;UBERON:0006595,3.83e-09,160;UBERON:0005177,4.82e-09,101;UBERON:0009856,6.11e-09,26;UBERON:0005911,3.49e-08,82;UBERON:0001301,4.11e-08,1;UBERON:0001242,5.26e-08,4;UBERON:0001262,5.26e-08,4;UBERON:0004786,5.26e-08,4;UBERON:0004808,5.26e-08,4;UBERON:0001277,5.26e-08,4;UBERON:0001000,5.82e-08,1;UBERON:0005352,5.82e-08,1;UBERON:0001052,8.25e-08,4;UBERON:0001155,1.22e-07,9;UBERON:0005904,1.24e-07,4;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31 | |||
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|short_description=p3@SOX6 | |||
}} |
Revision as of 16:53, 10 September 2013
Short description: | p3@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SOX6_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 43bp_to_ENST00000533411_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PQL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-09 | 12 |
intestinal epithelial cell | 5.26e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.