FFCP PHASE1:Hg19::chr11:12217563..12217573,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9645|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24693|TSSclassifier=S|UniProt=|association_with_transcript=71bp_to_ENST00000527195,ENST00000532166_5end|coexpression_cluster_id=C1618|description=CAGE_peak_28_at_MICAL2_5end|id=chr11:12217563..12217573,+|ontology_enrichment_celltype=CL:0000080!7.37e-17!6;CL:0000084!7.84e-17!25;CL:0000827!7.84e-17!25;CL:0000842!1.12e-12!3;CL:0000791!1.15e-12!18;CL:0000789!1.15e-12!18;CL:0002420!1.15e-12!18;CL:0002419!1.15e-12!18;CL:0000790!1.15e-12!18;CL:0000623!1.21e-12!3;CL:0000825!1.21e-12!3;CL:0000625!3.23e-12!11;CL:0000838!1.11e-11!52;CL:0000542!2.10e-11!53;CL:0000051!2.10e-11!53;CL:0000738!2.76e-11!140;CL:0002087!1.76e-10!119;CL:0000988!4.51e-10!182;CL:0000224!1.28e-09!4;CL:0000037!5.19e-09!172;CL:0000566!5.19e-09!172;CL:0002031!7.79e-07!124|ontology_enrichment_celltype_v019=CL:0000084;5.49e-09;25|ontology_enrichment_celltype_v019_2=CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;1.46e-50;1!DOID:0060061;1.46e-50;1!DOID:8691;1.46e-50;1|ontology_enrichment_disease_v019_2=DOID:0060060,1.46e-50,1;DOID:0060061,1.46e-50,1;DOID:8691,1.46e-50,1|ontology_enrichment_uberon=UBERON:0002370!4.39e-10!4;UBERON:0005058!4.39e-10!4;UBERON:0009113!4.39e-10!4;UBERON:0003295!4.39e-10!4;UBERON:0005562!4.39e-10!4;UBERON:0004177!2.04e-09!7;UBERON:0000178!4.30e-09!15;UBERON:0000179!4.30e-09!15;UBERON:0000463!4.30e-09!15;UBERON:0003351!7.66e-07!6|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-98;2!UBERON:0005058;1.55e-98;2!UBERON:0009113;1.55e-98;2!UBERON:0004177;2.71e-40;5!UBERON:0005057;2.71e-40;5!UBERON:0000077;2.14e-08;27!UBERON:0002405;2.14e-08;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.445641827540694,0,0.886135578334485,0.270803863765016,0.512365278902701,0.520237390239513,0.164437904603676,0.829050053357545,0.869409257205157,0,0.535081656179426,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,1.64225599384209,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39972270880846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00225620491619,2.29676442894674,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p28@MICAL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=71bp_to_ENST00000527195,ENST00000532166_5end | |||
|coexpression_cluster_id=C1618 | |||
|description=CAGE_peak_28_at_MICAL2_5end | |||
|id=chr11:12217563..12217573,+ | |||
|ontology_enrichment_celltype=CL:0000080!7.37e-17!6;CL:0000084!7.84e-17!25;CL:0000827!7.84e-17!25;CL:0000842!1.12e-12!3;CL:0000791!1.15e-12!18;CL:0000789!1.15e-12!18;CL:0002420!1.15e-12!18;CL:0002419!1.15e-12!18;CL:0000790!1.15e-12!18;CL:0000623!1.21e-12!3;CL:0000825!1.21e-12!3;CL:0000625!3.23e-12!11;CL:0000838!1.11e-11!52;CL:0000542!2.10e-11!53;CL:0000051!2.10e-11!53;CL:0000738!2.76e-11!140;CL:0002087!1.76e-10!119;CL:0000988!4.51e-10!182;CL:0000224!1.28e-09!4;CL:0000037!5.19e-09!172;CL:0000566!5.19e-09!172;CL:0002031!7.79e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.49e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.46e-50;1!DOID:0060061;1.46e-50;1!DOID:8691;1.46e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.46e-50,1;DOID:0060061,1.46e-50,1;DOID:8691,1.46e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.39e-10!4;UBERON:0005058!4.39e-10!4;UBERON:0009113!4.39e-10!4;UBERON:0003295!4.39e-10!4;UBERON:0005562!4.39e-10!4;UBERON:0004177!2.04e-09!7;UBERON:0000178!4.30e-09!15;UBERON:0000179!4.30e-09!15;UBERON:0000463!4.30e-09!15;UBERON:0003351!7.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-98;2!UBERON:0005058;1.55e-98;2!UBERON:0009113;1.55e-98;2!UBERON:0004177;2.71e-40;5!UBERON:0005057;2.71e-40;5!UBERON:0000077;2.14e-08;27!UBERON:0002405;2.14e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.445641827540694,0,0.886135578334485,0.270803863765016,0.512365278902701,0.520237390239513,0.164437904603676,0.829050053357545,0.869409257205157,0,0.535081656179426,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,1.64225599384209,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39972270880846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00225620491619,2.29676442894674,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@MICAL2 | |||
}} |
Revision as of 16:18, 10 September 2013
Short description: | p28@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_MICAL2_5end |
Coexpression cluster: | C1618_mycosis_CD4_thymus_CD8_Natural_chronic_Basophils |
Association with transcript: | 71bp_to_ENST00000527195, ENST00000532166_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.49e-09 | 25 |
pro-T cell | 5.49e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-50 | 4 |
hemolymphoid system gland | 5.14e-50 | 4 |
thymic region | 5.14e-50 | 4 |
pharyngeal gland | 5.14e-50 | 4 |
thymus primordium | 5.14e-50 | 4 |
pharyngeal epithelium | 8.35e-34 | 6 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
neck | 8.54e-21 | 10 |
gland of gut | 8.54e-21 | 10 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
entire pharyngeal arch endoderm | 5.14e-19 | 11 |
early pharyngeal endoderm | 5.14e-19 | 11 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
respiratory system epithelium | 3.92e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.46e-50 | 1 |
cutaneous T cell lymphoma | 1.46e-50 | 1 |
mycosis fungoides | 1.46e-50 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.