FFCP PHASE1:Hg19::chr11:12217480..12217534,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9645|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24693|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000527195,ENST00000532166_5end|coexpression_cluster_id=C1618|description=CAGE_peak_2_at_MICAL2_5end|id=chr11:12217480..12217534,+|ontology_enrichment_celltype=CL:0000084!7.59e-31!25;CL:0000827!7.59e-31!25;CL:0000738!6.19e-25!140;CL:0000791!1.15e-23!18;CL:0000789!1.15e-23!18;CL:0002420!1.15e-23!18;CL:0002419!1.15e-23!18;CL:0000790!1.15e-23!18;CL:0000838!5.10e-22!52;CL:0000542!2.28e-21!53;CL:0000051!2.28e-21!53;CL:0002087!1.12e-20!119;CL:0000988!1.21e-18!182;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172;CL:0002031!3.45e-16!124;CL:0000625!1.64e-15!11;CL:0002032!3.77e-15!165;CL:0000837!3.77e-15!165;CL:0000624!1.02e-08!6;CL:0000080!4.32e-08!6|ontology_enrichment_celltype_v019=CL:0000084;1.14e-49;25!CL:0000791;1.78e-47;18!CL:0000789;1.78e-47;18!CL:0002419;1.78e-47;18!CL:0000625;1.88e-30;11!CL:0000624;2.35e-16;6!CL:0000542;2.73e-15;53!CL:0000623;2.30e-09;3!CL:0000898;5.71e-09;3!CL:0000226;1.33e-08;3!CL:0000842;1.33e-08;3|ontology_enrichment_celltype_v019_2=CL:0000084,1.09e-49,25;CL:0000827,1.09e-49,25;CL:0000791,2.05e-47,18;CL:0000789,2.05e-47,18;CL:0002420,2.05e-47,18;CL:0002419,2.05e-47,18;CL:0000790,2.05e-47,18;CL:0000625,1.94e-30,11;CL:0000838,1.56e-27,52;CL:0000542,7.07e-27,53;CL:0000051,7.07e-27,53;CL:0000738,1.28e-17,136;CL:0002087,5.01e-17,115;CL:0000624,2.38e-16,6;CL:0000988,3.45e-13,177;CL:0002031,1.41e-12,120;CL:0000037,1.77e-12,168;CL:0002032,7.48e-10,161;CL:0000837,7.48e-10,161;CL:0000623,2.33e-09,3;CL:0000825,2.33e-09,3;CL:0000898,5.64e-09,3;CL:0000226,1.79e-08,3;CL:0000842,1.79e-08,3|ontology_enrichment_development_v019=CL:0000790;1.78e-47;18!CL:0000051;2.73e-15;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.92e-15!15;UBERON:0000179!1.92e-15!15;UBERON:0000463!1.92e-15!15;UBERON:0007023!1.03e-13!115;UBERON:0002390!2.05e-09!102;UBERON:0003061!2.05e-09!102;UBERON:0002193!2.90e-08!112;UBERON:0004177!2.50e-07!7|ontology_enrichment_uberon_v019=UBERON:0000178;7.62e-27;15!UBERON:0000179;7.62e-27;15!UBERON:0000463;7.62e-27;15!UBERON:0002390;1.33e-18;32!UBERON:0002193;1.38e-10;42!UBERON:0004177;2.61e-09;5!UBERON:0005057;2.61e-09;5!UBERON:0002370;3.32e-07;2!UBERON:0005058;3.32e-07;2!UBERON:0009113;3.32e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.36e-27,15;UBERON:0000179,9.36e-27,15;UBERON:0000463,9.36e-27,15;UBERON:0004177,5.27e-14,7;UBERON:0005057,5.27e-14,7;UBERON:0002370,5.56e-12,4;UBERON:0005058,5.56e-12,4;UBERON:0009113,5.56e-12,4;UBERON:0003295,5.56e-12,4;UBERON:0005562,5.56e-12,4;UBERON:0002390,4.77e-09,98;UBERON:0003061,4.77e-09,98;UBERON:0002193,1.36e-08,108;UBERON:0003351,5.75e-08,6;UBERON:0001042,5.68e-07,10;UBERON:0009145,5.68e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.75354993794233,5.75744097145819,0.928896739896456,0,0,0,0,0,0,1.10799081706375,0.601633342410425,1.51907609501096,0.895661896959697,2.26725566213286,1.80302897343931,0,0,0,0,0.411167888021826,0,0,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0.612167784741805,0.641858054152187,0,0,0.199463657621632,0,0.290209238628584,2.26954089876456,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,4.52432471261816,5.50215067848831,6.16804496998528,16.5514630436771,1.62961133316795,1.89379122293893,1.94826728407911,29.3009501608006,9.72199494666963,12.4058980966828,24.1015438750864,16.1395062854351,17.5580119205836,4.93313713811028,3.86890024900188,8.11448640058147,1.63115219478266,2.1403266247177,1.04535523804977,9.06474741580529,8.04763036564035,7.90343124610049,9.86776798876061,6.68987370080603,10.4173352617027,9.50452044448374,7.07703059665532,13.1826209489051,12.4930726552346,7.81364931745256,13.1380479507367,12.7012248231581,6.95344509037119,4.19990771260117,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,0,0.649094787309367,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,2.24170287987055,10.836691811106,6.03757209606648,5.51875056002918,0,0,0,0,1.27587750330633,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,1.07857100409308,5.12292277456533,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000527195,ENST00000532166_5end | |||
|coexpression_cluster_id=C1618 | |||
|description=CAGE_peak_2_at_MICAL2_5end | |||
|id=chr11:12217480..12217534,+ | |||
|ontology_enrichment_celltype=CL:0000084!7.59e-31!25;CL:0000827!7.59e-31!25;CL:0000738!6.19e-25!140;CL:0000791!1.15e-23!18;CL:0000789!1.15e-23!18;CL:0002420!1.15e-23!18;CL:0002419!1.15e-23!18;CL:0000790!1.15e-23!18;CL:0000838!5.10e-22!52;CL:0000542!2.28e-21!53;CL:0000051!2.28e-21!53;CL:0002087!1.12e-20!119;CL:0000988!1.21e-18!182;CL:0000037!2.19e-18!172;CL:0000566!2.19e-18!172;CL:0002031!3.45e-16!124;CL:0000625!1.64e-15!11;CL:0002032!3.77e-15!165;CL:0000837!3.77e-15!165;CL:0000624!1.02e-08!6;CL:0000080!4.32e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.14e-49;25!CL:0000791;1.78e-47;18!CL:0000789;1.78e-47;18!CL:0002419;1.78e-47;18!CL:0000625;1.88e-30;11!CL:0000624;2.35e-16;6!CL:0000542;2.73e-15;53!CL:0000623;2.30e-09;3!CL:0000898;5.71e-09;3!CL:0000226;1.33e-08;3!CL:0000842;1.33e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.09e-49,25;CL:0000827,1.09e-49,25;CL:0000791,2.05e-47,18;CL:0000789,2.05e-47,18;CL:0002420,2.05e-47,18;CL:0002419,2.05e-47,18;CL:0000790,2.05e-47,18;CL:0000625,1.94e-30,11;CL:0000838,1.56e-27,52;CL:0000542,7.07e-27,53;CL:0000051,7.07e-27,53;CL:0000738,1.28e-17,136;CL:0002087,5.01e-17,115;CL:0000624,2.38e-16,6;CL:0000988,3.45e-13,177;CL:0002031,1.41e-12,120;CL:0000037,1.77e-12,168;CL:0002032,7.48e-10,161;CL:0000837,7.48e-10,161;CL:0000623,2.33e-09,3;CL:0000825,2.33e-09,3;CL:0000898,5.64e-09,3;CL:0000226,1.79e-08,3;CL:0000842,1.79e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.78e-47;18!CL:0000051;2.73e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.92e-15!15;UBERON:0000179!1.92e-15!15;UBERON:0000463!1.92e-15!15;UBERON:0007023!1.03e-13!115;UBERON:0002390!2.05e-09!102;UBERON:0003061!2.05e-09!102;UBERON:0002193!2.90e-08!112;UBERON:0004177!2.50e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.62e-27;15!UBERON:0000179;7.62e-27;15!UBERON:0000463;7.62e-27;15!UBERON:0002390;1.33e-18;32!UBERON:0002193;1.38e-10;42!UBERON:0004177;2.61e-09;5!UBERON:0005057;2.61e-09;5!UBERON:0002370;3.32e-07;2!UBERON:0005058;3.32e-07;2!UBERON:0009113;3.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.36e-27,15;UBERON:0000179,9.36e-27,15;UBERON:0000463,9.36e-27,15;UBERON:0004177,5.27e-14,7;UBERON:0005057,5.27e-14,7;UBERON:0002370,5.56e-12,4;UBERON:0005058,5.56e-12,4;UBERON:0009113,5.56e-12,4;UBERON:0003295,5.56e-12,4;UBERON:0005562,5.56e-12,4;UBERON:0002390,4.77e-09,98;UBERON:0003061,4.77e-09,98;UBERON:0002193,1.36e-08,108;UBERON:0003351,5.75e-08,6;UBERON:0001042,5.68e-07,10;UBERON:0009145,5.68e-07,10 | |||
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|short_description=p2@MICAL2 | |||
}} |
Revision as of 16:18, 10 September 2013
Short description: | p2@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MICAL2_5end |
Coexpression cluster: | C1618_mycosis_CD4_thymus_CD8_Natural_chronic_Basophils |
Association with transcript: | 0bp_to_ENST00000527195, ENST00000532166_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.09e-49 | 25 |
pro-T cell | 1.09e-49 | 25 |
mature alpha-beta T cell | 2.05e-47 | 18 |
alpha-beta T cell | 2.05e-47 | 18 |
immature T cell | 2.05e-47 | 18 |
mature T cell | 2.05e-47 | 18 |
immature alpha-beta T cell | 2.05e-47 | 18 |
CD8-positive, alpha-beta T cell | 1.94e-30 | 11 |
lymphoid lineage restricted progenitor cell | 1.56e-27 | 52 |
lymphocyte | 7.07e-27 | 53 |
common lymphoid progenitor | 7.07e-27 | 53 |
leukocyte | 1.28e-17 | 136 |
nongranular leukocyte | 5.01e-17 | 115 |
CD4-positive, alpha-beta T cell | 2.38e-16 | 6 |
hematopoietic cell | 3.45e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.41e-12 | 120 |
hematopoietic stem cell | 1.77e-12 | 168 |
hematopoietic oligopotent progenitor cell | 7.48e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.48e-10 | 161 |
natural killer cell | 2.33e-09 | 3 |
pro-NK cell | 2.33e-09 | 3 |
naive T cell | 5.64e-09 | 3 |
single nucleate cell | 1.79e-08 | 3 |
mononuclear cell | 1.79e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.36e-27 | 15 |
haemolymphatic fluid | 9.36e-27 | 15 |
organism substance | 9.36e-27 | 15 |
hemopoietic organ | 5.27e-14 | 7 |
immune organ | 5.27e-14 | 7 |
thymus | 5.56e-12 | 4 |
hemolymphoid system gland | 5.56e-12 | 4 |
thymic region | 5.56e-12 | 4 |
pharyngeal gland | 5.56e-12 | 4 |
thymus primordium | 5.56e-12 | 4 |
hematopoietic system | 4.77e-09 | 98 |
blood island | 4.77e-09 | 98 |
hemolymphoid system | 1.36e-08 | 108 |
pharyngeal epithelium | 5.75e-08 | 6 |
chordate pharynx | 5.68e-07 | 10 |
pharyngeal region of foregut | 5.68e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.