FFCP PHASE1:Hg19::chr11:116701496..116701523,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C129|description=CAGE_peak_at_chr11:116701496..116701523,+|id=chr11:116701496..116701523,+|ontology_enrichment_celltype=CL:0000181!4.30e-28!12;CL:0000417!4.30e-28!12;CL:0000668!4.30e-28!12;CL:0000414!4.30e-28!12;CL:0000412!4.30e-28!12;CL:0000182!4.30e-28!12;CL:0000223!2.48e-09!59|ontology_enrichment_celltype_v019=CL:0000182;9.29e-11;12|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-11,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.60e-31!19;UBERON:0006925!2.60e-31!19;UBERON:0008836!2.60e-31!19;UBERON:0008835!6.36e-27!22;UBERON:0003894!6.36e-27!22;UBERON:0009854!1.03e-25!23;UBERON:0007499!1.38e-23!25;UBERON:0009497!1.38e-23!25;UBERON:0000015!1.38e-23!25;UBERON:0002423!1.38e-23!25;UBERON:0006235!1.38e-23!25;UBERON:0004161!1.38e-23!25;UBERON:0005057!1.21e-22!26;UBERON:0009856!1.21e-22!26;UBERON:0002365!7.62e-19!31;UBERON:0002330!7.62e-19!31;UBERON:0002368!1.39e-16!35;UBERON:0003929!3.00e-16!54;UBERON:0004921!4.19e-14!129;UBERON:0004185!4.19e-14!129;UBERON:0000949!1.10e-12!45;UBERON:0002530!6.41e-12!59;UBERON:0000160!8.30e-12!27;UBERON:0001007!2.39e-11!155;UBERON:0001555!2.39e-11!155;UBERON:0007026!2.39e-11!155;UBERON:0004119!3.28e-10!169;UBERON:0000925!3.28e-10!169;UBERON:0006595!3.28e-10!169;UBERON:0005911!3.35e-10!82;UBERON:0005172!3.36e-10!55;UBERON:0005173!3.36e-10!55;UBERON:0002417!4.24e-09!61;UBERON:0000916!4.24e-09!61;UBERON:0005409!4.35e-09!35|ontology_enrichment_uberon_v019=UBERON:0002108;3.01e-24;4!UBERON:0000160;3.75e-18;17!UBERON:0002107;8.13e-18;19!UBERON:0006925;8.13e-18;19!UBERON:0005409;3.25e-14;22!UBERON:0002423;1.53e-13;25!UBERON:0002365;6.71e-11;31!UBERON:0002330;6.71e-11;31!UBERON:0001007;6.22e-10;81!UBERON:0002368;1.78e-09;33!UBERON:0004921;1.97e-08;33!UBERON:0000949;5.71e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.13e-24,4;UBERON:0000160,3.43e-18,17;UBERON:0002107,8.00e-18,19;UBERON:0006925,8.00e-18,19;UBERON:0008836,8.00e-18,19;UBERON:0008835,2.14e-15,22;UBERON:0003894,2.14e-15,22;UBERON:0009854,9.99e-15,23;UBERON:0007499,1.51e-13,25;UBERON:0009497,1.51e-13,25;UBERON:0000015,1.51e-13,25;UBERON:0002423,1.51e-13,25;UBERON:0006235,1.51e-13,25;UBERON:0004161,1.51e-13,25;UBERON:0009856,5.01e-13,26;UBERON:0005409,1.33e-12,25;UBERON:0004921,2.98e-12,118;UBERON:0003929,1.26e-11,54;UBERON:0002365,6.41e-11,31;UBERON:0002330,6.41e-11,31;UBERON:0001007,9.65e-10,145;UBERON:0001555,9.65e-10,145;UBERON:0007026,9.65e-10,145;UBERON:0002368,1.15e-09,35;UBERON:0004119,1.04e-08,160;UBERON:0000925,1.04e-08,160;UBERON:0006595,1.04e-08,160;UBERON:0011216,2.27e-08,223;UBERON:0002530,6.61e-08,59;UBERON:0000949,1.70e-07,45;UBERON:0005911,1.86e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,14.7424082501644,16.5421173870793,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5710034210221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.498145319624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.472699093843342,0.494495150286999,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7069546393014,35.7768600062998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78806185809585,3.49695296806332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58708052154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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr11:116701496..116701523,+ | |||
|id=chr11:116701496..116701523,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.30e-28!12;CL:0000417!4.30e-28!12;CL:0000668!4.30e-28!12;CL:0000414!4.30e-28!12;CL:0000412!4.30e-28!12;CL:0000182!4.30e-28!12;CL:0000223!2.48e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.29e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-11,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.60e-31!19;UBERON:0006925!2.60e-31!19;UBERON:0008836!2.60e-31!19;UBERON:0008835!6.36e-27!22;UBERON:0003894!6.36e-27!22;UBERON:0009854!1.03e-25!23;UBERON:0007499!1.38e-23!25;UBERON:0009497!1.38e-23!25;UBERON:0000015!1.38e-23!25;UBERON:0002423!1.38e-23!25;UBERON:0006235!1.38e-23!25;UBERON:0004161!1.38e-23!25;UBERON:0005057!1.21e-22!26;UBERON:0009856!1.21e-22!26;UBERON:0002365!7.62e-19!31;UBERON:0002330!7.62e-19!31;UBERON:0002368!1.39e-16!35;UBERON:0003929!3.00e-16!54;UBERON:0004921!4.19e-14!129;UBERON:0004185!4.19e-14!129;UBERON:0000949!1.10e-12!45;UBERON:0002530!6.41e-12!59;UBERON:0000160!8.30e-12!27;UBERON:0001007!2.39e-11!155;UBERON:0001555!2.39e-11!155;UBERON:0007026!2.39e-11!155;UBERON:0004119!3.28e-10!169;UBERON:0000925!3.28e-10!169;UBERON:0006595!3.28e-10!169;UBERON:0005911!3.35e-10!82;UBERON:0005172!3.36e-10!55;UBERON:0005173!3.36e-10!55;UBERON:0002417!4.24e-09!61;UBERON:0000916!4.24e-09!61;UBERON:0005409!4.35e-09!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.01e-24;4!UBERON:0000160;3.75e-18;17!UBERON:0002107;8.13e-18;19!UBERON:0006925;8.13e-18;19!UBERON:0005409;3.25e-14;22!UBERON:0002423;1.53e-13;25!UBERON:0002365;6.71e-11;31!UBERON:0002330;6.71e-11;31!UBERON:0001007;6.22e-10;81!UBERON:0002368;1.78e-09;33!UBERON:0004921;1.97e-08;33!UBERON:0000949;5.71e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.13e-24,4;UBERON:0000160,3.43e-18,17;UBERON:0002107,8.00e-18,19;UBERON:0006925,8.00e-18,19;UBERON:0008836,8.00e-18,19;UBERON:0008835,2.14e-15,22;UBERON:0003894,2.14e-15,22;UBERON:0009854,9.99e-15,23;UBERON:0007499,1.51e-13,25;UBERON:0009497,1.51e-13,25;UBERON:0000015,1.51e-13,25;UBERON:0002423,1.51e-13,25;UBERON:0006235,1.51e-13,25;UBERON:0004161,1.51e-13,25;UBERON:0009856,5.01e-13,26;UBERON:0005409,1.33e-12,25;UBERON:0004921,2.98e-12,118;UBERON:0003929,1.26e-11,54;UBERON:0002365,6.41e-11,31;UBERON:0002330,6.41e-11,31;UBERON:0001007,9.65e-10,145;UBERON:0001555,9.65e-10,145;UBERON:0007026,9.65e-10,145;UBERON:0002368,1.15e-09,35;UBERON:0004119,1.04e-08,160;UBERON:0000925,1.04e-08,160;UBERON:0006595,1.04e-08,160;UBERON:0011216,2.27e-08,223;UBERON:0002530,6.61e-08,59;UBERON:0000949,1.70e-07,45;UBERON:0005911,1.86e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8861076608028,14.7424082501644,16.5421173870793,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5710034210221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.498145319624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68069372556344,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.472699093843342,0.494495150286999,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7069546393014,35.7768600062998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78806185809585,3.49695296806332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116701496..116701523,+ | |||
}} |
Revision as of 15:52, 10 September 2013
Short description: | p@chr11:116701496..116701523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116701496..116701523, + |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.30e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.13e-24 | 4 |
intestine | 3.43e-18 | 17 |
liver | 8.00e-18 | 19 |
digestive gland | 8.00e-18 | 19 |
liver bud | 8.00e-18 | 19 |
hepatic diverticulum | 2.14e-15 | 22 |
liver primordium | 2.14e-15 | 22 |
digestive tract diverticulum | 9.99e-15 | 23 |
epithelial sac | 1.51e-13 | 25 |
epithelium of foregut-midgut junction | 1.51e-13 | 25 |
anatomical boundary | 1.51e-13 | 25 |
hepatobiliary system | 1.51e-13 | 25 |
foregut-midgut junction | 1.51e-13 | 25 |
septum transversum | 1.51e-13 | 25 |
sac | 5.01e-13 | 26 |
gastrointestinal system | 1.33e-12 | 25 |
subdivision of digestive tract | 2.98e-12 | 118 |
gut epithelium | 1.26e-11 | 54 |
exocrine gland | 6.41e-11 | 31 |
exocrine system | 6.41e-11 | 31 |
digestive system | 9.65e-10 | 145 |
digestive tract | 9.65e-10 | 145 |
primitive gut | 9.65e-10 | 145 |
endocrine gland | 1.15e-09 | 35 |
endoderm-derived structure | 1.04e-08 | 160 |
endoderm | 1.04e-08 | 160 |
presumptive endoderm | 1.04e-08 | 160 |
organ system subdivision | 2.27e-08 | 223 |
gland | 6.61e-08 | 59 |
endocrine system | 1.70e-07 | 45 |
endo-epithelium | 1.86e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.