FFCP PHASE1:Hg19::chr11:116663129..116663141,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116519|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17288|TSSclassifier=S|UniProt=Q6Q788|association_with_transcript=0bp_to_ENST00000542499,NM_001166598,NM_052968,uc009yzf.2,uc009yzg.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_APOA5_5end|id=chr11:116663129..116663141,-|ontology_enrichment_celltype=CL:0000181!1.59e-33!12;CL:0000417!1.59e-33!12;CL:0000668!1.59e-33!12;CL:0000414!1.59e-33!12;CL:0000412!1.59e-33!12;CL:0000182!1.59e-33!12;CL:0002563!6.73e-12!4;CL:0000223!2.79e-11!59|ontology_enrichment_celltype_v019=CL:0000182;1.31e-51;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.18e-51,12;CL:0000223,5.62e-11,58|ontology_enrichment_development_v019=UBERON:0004161;3.09e-36;11!UBERON:0009497;9.12e-31;13!UBERON:0001041;1.19e-13;30!UBERON:0003104;4.27e-13;31!CL:0000223;7.66e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.55e-28!19;UBERON:0006925!1.55e-28!19;UBERON:0008836!1.55e-28!19;UBERON:0009497!7.48e-28!25;UBERON:0000015!7.48e-28!25;UBERON:0002423!7.48e-28!25;UBERON:0006235!7.48e-28!25;UBERON:0004161!7.48e-28!25;UBERON:0008835!1.43e-24!22;UBERON:0003894!1.43e-24!22;UBERON:0009854!1.76e-23!23;UBERON:0007499!1.48e-21!25;UBERON:0005057!1.05e-20!26;UBERON:0009856!1.05e-20!26;UBERON:0003929!2.34e-19!54;UBERON:0002365!2.85e-17!31;UBERON:0002330!2.85e-17!31;UBERON:0002368!3.15e-15!35;UBERON:0005911!2.66e-12!82;UBERON:0005172!3.36e-12!55;UBERON:0005173!3.36e-12!55;UBERON:0001242!6.73e-12!4;UBERON:0001262!6.73e-12!4;UBERON:0004786!6.73e-12!4;UBERON:0004808!6.73e-12!4;UBERON:0001277!6.73e-12!4;UBERON:0000949!1.06e-11!45;UBERON:0002417!6.53e-11!61;UBERON:0000916!6.53e-11!61;UBERON:0003350!1.06e-09!5;UBERON:0004921!7.50e-09!129;UBERON:0004185!7.50e-09!129;UBERON:0002530!9.14e-09!59;UBERON:0001007!1.48e-08!155;UBERON:0001555!1.48e-08!155;UBERON:0007026!1.48e-08!155;UBERON:0004119!1.05e-07!169;UBERON:0000925!1.05e-07!169;UBERON:0006595!1.05e-07!169;UBERON:0000490!9.41e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;6.98e-47;19!UBERON:0006925;6.98e-47;19!UBERON:0002423;1.00e-35;25!UBERON:0002365;4.73e-28;31!UBERON:0002330;4.73e-28;31!UBERON:0002368;4.71e-23;33!UBERON:0000949;7.07e-19;43!UBERON:0005172;4.91e-11;52!UBERON:0005173;4.91e-11;52!UBERON:0002530;3.80e-10;57!UBERON:0002417;5.06e-10;58!UBERON:0000916;5.06e-10;58!UBERON:0001007;5.45e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.45e-47,19;UBERON:0006925,6.45e-47,19;UBERON:0008836,6.45e-47,19;UBERON:0008835,1.42e-40,22;UBERON:0003894,1.42e-40,22;UBERON:0009854,7.93e-39,23;UBERON:0007499,9.46e-36,25;UBERON:0009497,9.46e-36,25;UBERON:0000015,9.46e-36,25;UBERON:0002423,9.46e-36,25;UBERON:0006235,9.46e-36,25;UBERON:0004161,9.46e-36,25;UBERON:0009856,2.17e-34,26;UBERON:0002365,6.77e-29,31;UBERON:0002330,6.77e-29,31;UBERON:0002368,1.26e-25,35;UBERON:0000949,5.46e-20,45;UBERON:0003929,1.08e-16,54;UBERON:0005172,1.08e-16,54;UBERON:0005173,1.08e-16,54;UBERON:0002530,2.72e-15,59;UBERON:0002417,4.86e-15,60;UBERON:0000916,4.86e-15,60;UBERON:0005911,4.90e-11,82;UBERON:0001041,2.09e-10,87;UBERON:0005177,5.70e-09,101;UBERON:0009569,4.32e-08,112;UBERON:0003914,9.58e-08,117;UBERON:0004921,1.29e-07,118;UBERON:0005256,1.99e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,8.27105869353966,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73323001075892,2.55489160981616,2.08950985947973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p2@APOA5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=116519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17288 | |||
|TSSclassifier=S | |||
|UniProt=Q6Q788 | |||
|association_with_transcript=0bp_to_ENST00000542499,NM_001166598,NM_052968,uc009yzf.2,uc009yzg.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_APOA5_5end | |||
|id=chr11:116663129..116663141,- | |||
|ontology_enrichment_celltype=CL:0000181!1.59e-33!12;CL:0000417!1.59e-33!12;CL:0000668!1.59e-33!12;CL:0000414!1.59e-33!12;CL:0000412!1.59e-33!12;CL:0000182!1.59e-33!12;CL:0002563!6.73e-12!4;CL:0000223!2.79e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.31e-51;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.18e-51,12;CL:0000223,5.62e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.09e-36;11!UBERON:0009497;9.12e-31;13!UBERON:0001041;1.19e-13;30!UBERON:0003104;4.27e-13;31!CL:0000223;7.66e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.55e-28!19;UBERON:0006925!1.55e-28!19;UBERON:0008836!1.55e-28!19;UBERON:0009497!7.48e-28!25;UBERON:0000015!7.48e-28!25;UBERON:0002423!7.48e-28!25;UBERON:0006235!7.48e-28!25;UBERON:0004161!7.48e-28!25;UBERON:0008835!1.43e-24!22;UBERON:0003894!1.43e-24!22;UBERON:0009854!1.76e-23!23;UBERON:0007499!1.48e-21!25;UBERON:0005057!1.05e-20!26;UBERON:0009856!1.05e-20!26;UBERON:0003929!2.34e-19!54;UBERON:0002365!2.85e-17!31;UBERON:0002330!2.85e-17!31;UBERON:0002368!3.15e-15!35;UBERON:0005911!2.66e-12!82;UBERON:0005172!3.36e-12!55;UBERON:0005173!3.36e-12!55;UBERON:0001242!6.73e-12!4;UBERON:0001262!6.73e-12!4;UBERON:0004786!6.73e-12!4;UBERON:0004808!6.73e-12!4;UBERON:0001277!6.73e-12!4;UBERON:0000949!1.06e-11!45;UBERON:0002417!6.53e-11!61;UBERON:0000916!6.53e-11!61;UBERON:0003350!1.06e-09!5;UBERON:0004921!7.50e-09!129;UBERON:0004185!7.50e-09!129;UBERON:0002530!9.14e-09!59;UBERON:0001007!1.48e-08!155;UBERON:0001555!1.48e-08!155;UBERON:0007026!1.48e-08!155;UBERON:0004119!1.05e-07!169;UBERON:0000925!1.05e-07!169;UBERON:0006595!1.05e-07!169;UBERON:0000490!9.41e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.98e-47;19!UBERON:0006925;6.98e-47;19!UBERON:0002423;1.00e-35;25!UBERON:0002365;4.73e-28;31!UBERON:0002330;4.73e-28;31!UBERON:0002368;4.71e-23;33!UBERON:0000949;7.07e-19;43!UBERON:0005172;4.91e-11;52!UBERON:0005173;4.91e-11;52!UBERON:0002530;3.80e-10;57!UBERON:0002417;5.06e-10;58!UBERON:0000916;5.06e-10;58!UBERON:0001007;5.45e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.45e-47,19;UBERON:0006925,6.45e-47,19;UBERON:0008836,6.45e-47,19;UBERON:0008835,1.42e-40,22;UBERON:0003894,1.42e-40,22;UBERON:0009854,7.93e-39,23;UBERON:0007499,9.46e-36,25;UBERON:0009497,9.46e-36,25;UBERON:0000015,9.46e-36,25;UBERON:0002423,9.46e-36,25;UBERON:0006235,9.46e-36,25;UBERON:0004161,9.46e-36,25;UBERON:0009856,2.17e-34,26;UBERON:0002365,6.77e-29,31;UBERON:0002330,6.77e-29,31;UBERON:0002368,1.26e-25,35;UBERON:0000949,5.46e-20,45;UBERON:0003929,1.08e-16,54;UBERON:0005172,1.08e-16,54;UBERON:0005173,1.08e-16,54;UBERON:0002530,2.72e-15,59;UBERON:0002417,4.86e-15,60;UBERON:0000916,4.86e-15,60;UBERON:0005911,4.90e-11,82;UBERON:0001041,2.09e-10,87;UBERON:0005177,5.70e-09,101;UBERON:0009569,4.32e-08,112;UBERON:0003914,9.58e-08,117;UBERON:0004921,1.29e-07,118;UBERON:0005256,1.99e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,8.27105869353966,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73323001075892,2.55489160981616,2.08950985947973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@APOA5 | |||
}} |
Revision as of 15:52, 10 September 2013
Short description: | p2@APOA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_APOA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000542499, NM_001166598, NM_052968, uc009yzf.2, uc009yzg.2_5end |
EntrezGene: | APOA5 |
HGNC: | 17288 |
UniProt: | Q6Q788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.18e-51 | 12 |
endodermal cell | 5.62e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.45e-47 | 19 |
digestive gland | 6.45e-47 | 19 |
liver bud | 6.45e-47 | 19 |
hepatic diverticulum | 1.42e-40 | 22 |
liver primordium | 1.42e-40 | 22 |
digestive tract diverticulum | 7.93e-39 | 23 |
epithelial sac | 9.46e-36 | 25 |
epithelium of foregut-midgut junction | 9.46e-36 | 25 |
anatomical boundary | 9.46e-36 | 25 |
hepatobiliary system | 9.46e-36 | 25 |
foregut-midgut junction | 9.46e-36 | 25 |
septum transversum | 9.46e-36 | 25 |
sac | 2.17e-34 | 26 |
exocrine gland | 6.77e-29 | 31 |
exocrine system | 6.77e-29 | 31 |
endocrine gland | 1.26e-25 | 35 |
endocrine system | 5.46e-20 | 45 |
gut epithelium | 1.08e-16 | 54 |
abdomen element | 1.08e-16 | 54 |
abdominal segment element | 1.08e-16 | 54 |
gland | 2.72e-15 | 59 |
abdominal segment of trunk | 4.86e-15 | 60 |
abdomen | 4.86e-15 | 60 |
endo-epithelium | 4.90e-11 | 82 |
foregut | 2.09e-10 | 87 |
trunk region element | 5.70e-09 | 101 |
subdivision of trunk | 4.32e-08 | 112 |
epithelial tube | 9.58e-08 | 117 |
subdivision of digestive tract | 1.29e-07 | 118 |
trunk mesenchyme | 1.99e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.