FFCP PHASE1:Hg19::chr10:8111510..8111523,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1124|description=CAGE_peak_at_chr10:8111510..8111523,+|id=chr10:8111510..8111523,+|ontology_enrichment_celltype=CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000838!2.70e-08!52;CL:0002541!4.38e-08!3;CL:0000542!4.67e-08!53;CL:0000051!4.67e-08!53;CL:0000623!7.22e-07!3;CL:0000825!7.22e-07!3|ontology_enrichment_celltype_v019=CL:0000349;1.74e-29;19!CL:0002537;1.96e-21;5!CL:0002541;9.25e-17;3!CL:0000039;1.21e-07;7!CL:0000586;1.21e-07;7!CL:0002536;4.17e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,1.35e-29,19;CL:0002537,1.11e-21,5;CL:0002541,1.37e-16,3;CL:0000039,1.13e-07,7;CL:0000586,1.13e-07,7;CL:0002536,3.48e-07,2|ontology_enrichment_development_v019=UBERON:0005754;6.05e-13;1!UBERON:0007297;4.17e-07;2|ontology_enrichment_disease=DOID:5093!1.98e-10!4;DOID:1612!1.98e-10!4|ontology_enrichment_disease_v019=DOID:5093;1.08e-27;4!DOID:1612;1.08e-27;4|ontology_enrichment_disease_v019_2=DOID:5093,1.08e-27,4;DOID:1612,1.08e-27,4|ontology_enrichment_uberon=UBERON:0005631!1.55e-18!14;UBERON:0000158!1.55e-18!14;UBERON:0003124!7.06e-12!7;UBERON:0000478!1.79e-11!24;UBERON:0000305!1.82e-08!7;UBERON:0000476!4.38e-08!3;UBERON:0000920!4.38e-08!3;UBERON:0004871!2.46e-07!8|ontology_enrichment_uberon_v019=UBERON:0005631;1.86e-41;10!UBERON:0000158;1.86e-41;10!UBERON:0000305;1.11e-26;7!UBERON:0000478;3.04e-23;24!UBERON:0003124;9.25e-17;3!UBERON:0000920;9.25e-17;3!UBERON:0000998;6.05e-13;1!UBERON:0006868;6.05e-13;1!UBERON:0000310;1.86e-11;10!UBERON:0001443;1.83e-10;11|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.55e-40,14;UBERON:0000158,2.55e-40,14;UBERON:0000305,5.32e-27,7;UBERON:0004871,1.13e-23,8;UBERON:0000478,2.48e-23,24;UBERON:0000920,1.37e-16,3;UBERON:0003124,9.19e-16,7;UBERON:0000998,5.38e-13,1;UBERON:0006868,5.38e-13,1;UBERON:0000310,1.86e-11,10;UBERON:0001443,1.83e-10,11;UBERON:0004923,4.17e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,1.17903228824749,0.822405995998037,0,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,0.812411591295047,0.896639238079726,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0628615714299,4.29243081047436,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0.606255142892519,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,1.67121139316383,1.18785872333055,1.84296421259539,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77112178821606,0.874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2439411102443,1.3037684630641,0.957003479195758,1.00757352742049,7.46248686426089,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_at_chr10:8111510..8111523,+ | |||
|id=chr10:8111510..8111523,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000838!2.70e-08!52;CL:0002541!4.38e-08!3;CL:0000542!4.67e-08!53;CL:0000051!4.67e-08!53;CL:0000623!7.22e-07!3;CL:0000825!7.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.74e-29;19!CL:0002537;1.96e-21;5!CL:0002541;9.25e-17;3!CL:0000039;1.21e-07;7!CL:0000586;1.21e-07;7!CL:0002536;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.35e-29,19;CL:0002537,1.11e-21,5;CL:0002541,1.37e-16,3;CL:0000039,1.13e-07,7;CL:0000586,1.13e-07,7;CL:0002536,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.05e-13;1!UBERON:0007297;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:5093!1.98e-10!4;DOID:1612!1.98e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.08e-27;4!DOID:1612;1.08e-27;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.08e-27,4;DOID:1612,1.08e-27,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.55e-18!14;UBERON:0000158!1.55e-18!14;UBERON:0003124!7.06e-12!7;UBERON:0000478!1.79e-11!24;UBERON:0000305!1.82e-08!7;UBERON:0000476!4.38e-08!3;UBERON:0000920!4.38e-08!3;UBERON:0004871!2.46e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.86e-41;10!UBERON:0000158;1.86e-41;10!UBERON:0000305;1.11e-26;7!UBERON:0000478;3.04e-23;24!UBERON:0003124;9.25e-17;3!UBERON:0000920;9.25e-17;3!UBERON:0000998;6.05e-13;1!UBERON:0006868;6.05e-13;1!UBERON:0000310;1.86e-11;10!UBERON:0001443;1.83e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.55e-40,14;UBERON:0000158,2.55e-40,14;UBERON:0000305,5.32e-27,7;UBERON:0004871,1.13e-23,8;UBERON:0000478,2.48e-23,24;UBERON:0000920,1.37e-16,3;UBERON:0003124,9.19e-16,7;UBERON:0000998,5.38e-13,1;UBERON:0006868,5.38e-13,1;UBERON:0000310,1.86e-11,10;UBERON:0001443,1.83e-10,11;UBERON:0004923,4.17e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,1.17903228824749,0.822405995998037,0,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,0.812411591295047,0.896639238079726,0.260118695119756,0.328875809207352,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0628615714299,4.29243081047436,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0.606255142892519,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,1.67121139316383,1.18785872333055,1.84296421259539,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77112178821606,0.874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2439411102443,1.3037684630641,0.957003479195758,1.00757352742049,7.46248686426089,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,1.26698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0.452122368852043,0.186224142887574,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr10:8111510..8111523,+ | |||
}} |
Revision as of 14:37, 10 September 2013
Short description: | p@chr10:8111510..8111523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:8111510..8111523, + |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.35e-29 | 19 |
amnion mesenchymal stem cell | 1.11e-21 | 5 |
chorionic membrane mesenchymal stem cell | 1.37e-16 | 3 |
germ line cell | 1.13e-07 | 7 |
germ cell | 1.13e-07 | 7 |
amniotic epithelial cell | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.55e-40 | 14 |
membranous layer | 2.55e-40 | 14 |
amnion | 5.32e-27 | 7 |
somatic layer of lateral plate mesoderm | 1.13e-23 | 8 |
extraembryonic structure | 2.48e-23 | 24 |
egg chorion | 1.37e-16 | 3 |
chorion | 9.19e-16 | 7 |
seminal vesicle | 5.38e-13 | 1 |
seminal fluid secreting gland | 5.38e-13 | 1 |
breast | 1.86e-11 | 10 |
chest | 1.83e-10 | 11 |
organ component layer | 4.17e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.08e-27 | 4 |
breast cancer | 1.08e-27 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.