FFCP PHASE1:Hg19::chr10:44873195..44873209,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C873|description=CAGE_peak_at_chr10:44873195..44873209,-|id=chr10:44873195..44873209,-|ontology_enrichment_celltype=CL:0000057!1.92e-12!75;CL:0002620!4.59e-10!23;CL:0000055!1.49e-09!180|ontology_enrichment_celltype_v019=CL:0002620;4.27e-16;23!CL:0002575;2.72e-13;2!CL:0000214;1.19e-09;3!CL:0000135;2.06e-09;3!CL:0000388;2.06e-09;3!CL:0002564;6.73e-09;3!CL:0000499;1.64e-07;28!CL:0000057;1.86e-07;73!CL:0000669;4.55e-07;4!CL:0000153;7.60e-07;9!CL:0000447;7.60e-07;9!CL:0000327;8.46e-07;15|ontology_enrichment_celltype_v019_2=CL:0002620,5.70e-16,23;CL:0000057,5.75e-15,76;CL:0002575,1.42e-13,2;CL:0000214,1.20e-09,3;CL:0000135,2.43e-09,3;CL:0000388,2.43e-09,3;CL:0002564,1.09e-08,3;CL:0000499,1.90e-07,28;CL:0000669,3.31e-07,4;CL:0000153,9.01e-07,9;CL:0000447,9.01e-07,9;CL:0000327,9.58e-07,15|ontology_enrichment_development_v019=UBERON:0004874;2.74e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3369;2.74e-07;1|ontology_enrichment_disease_v019_2=DOID:3369,2.07e-07,1|ontology_enrichment_uberon=UBERON:0002199!4.43e-08!45;UBERON:0002416!4.43e-08!45;UBERON:0003102!1.37e-07!95|ontology_enrichment_uberon_v019=UBERON:0004905;1.14e-12;8!UBERON:0000982;1.14e-12;8!UBERON:0004770;1.14e-12;8!UBERON:0006915;1.19e-09;3!UBERON:0007616;1.19e-09;3!UBERON:0002217;1.19e-09;3!UBERON:0002018;1.19e-09;3!UBERON:0007846;2.06e-09;3!UBERON:0000043;2.06e-09;3!UBERON:0007845;2.06e-09;3!UBERON:0002242;6.73e-09;3!UBERON:0000989;2.74e-07;1!UBERON:0002134;2.74e-07;1!UBERON:0008811;2.74e-07;1!UBERON:0005208;2.74e-07;1!UBERON:0004145;2.74e-07;1!UBERON:0005946;2.74e-07;1!UBERON:0005965;2.74e-07;1!UBERON:0002078;2.74e-07;1!UBERON:0002199;5.12e-07;46!UBERON:0002416;5.12e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.64e-12,8;UBERON:0000982,1.64e-12,8;UBERON:0004770,1.64e-12,8;UBERON:0006915,1.20e-09,3;UBERON:0007616,1.20e-09,3;UBERON:0002217,1.20e-09,3;UBERON:0002018,1.20e-09,3;UBERON:0002199,2.24e-09,46;UBERON:0002416,2.24e-09,46;UBERON:0007846,2.43e-09,3;UBERON:0000043,2.43e-09,3;UBERON:0007845,2.43e-09,3;UBERON:0002242,1.09e-08,3;UBERON:0003068,1.09e-08,3;UBERON:0002328,1.09e-08,3;UBERON:0004880,1.09e-08,3;UBERON:0002097,1.91e-08,41;UBERON:0002384,1.56e-07,371;UBERON:0000989,2.21e-07,1;UBERON:0008811,2.21e-07,1;UBERON:0006258,2.21e-07,1;UBERON:0005876,2.21e-07,1;UBERON:0004874,2.21e-07,1;UBERON:0002134,2.83e-07,1;UBERON:0005208,2.83e-07,1;UBERON:0005946,2.83e-07,1;UBERON:0005965,2.83e-07,1;UBERON:0002078,2.83e-07,1|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,2.08948502559871,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.132409180813219,1.72101972449288,0,0.560677600142307,0,1.48000529050296,0,0.269421344139376,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,1.48360157567134,0.910161361938026,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0.89694817844431,0,1.05965950579781,0.600182192168805,1.13357782162283,0.772921620136887,0.930584281657949,1.18143432568886,2.24105111870757,0.252433774244115,0.552299391853796,6.62748832957129,2.4850671476163,2.41805035746337,2.37384829234683,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,1.2269149171914,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,1.56640925970192,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0,1.09814811894422,0.117812402345686,0,0,0,0,0.487426979262569,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,3.58882980006029,10.8667314676768,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C873 | |||
|description=CAGE_peak_at_chr10:44873195..44873209,- | |||
|id=chr10:44873195..44873209,- | |||
|ontology_enrichment_celltype=CL:0000057!1.92e-12!75;CL:0002620!4.59e-10!23;CL:0000055!1.49e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.27e-16;23!CL:0002575;2.72e-13;2!CL:0000214;1.19e-09;3!CL:0000135;2.06e-09;3!CL:0000388;2.06e-09;3!CL:0002564;6.73e-09;3!CL:0000499;1.64e-07;28!CL:0000057;1.86e-07;73!CL:0000669;4.55e-07;4!CL:0000153;7.60e-07;9!CL:0000447;7.60e-07;9!CL:0000327;8.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.70e-16,23;CL:0000057,5.75e-15,76;CL:0002575,1.42e-13,2;CL:0000214,1.20e-09,3;CL:0000135,2.43e-09,3;CL:0000388,2.43e-09,3;CL:0002564,1.09e-08,3;CL:0000499,1.90e-07,28;CL:0000669,3.31e-07,4;CL:0000153,9.01e-07,9;CL:0000447,9.01e-07,9;CL:0000327,9.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;2.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.07e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.43e-08!45;UBERON:0002416!4.43e-08!45;UBERON:0003102!1.37e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.14e-12;8!UBERON:0000982;1.14e-12;8!UBERON:0004770;1.14e-12;8!UBERON:0006915;1.19e-09;3!UBERON:0007616;1.19e-09;3!UBERON:0002217;1.19e-09;3!UBERON:0002018;1.19e-09;3!UBERON:0007846;2.06e-09;3!UBERON:0000043;2.06e-09;3!UBERON:0007845;2.06e-09;3!UBERON:0002242;6.73e-09;3!UBERON:0000989;2.74e-07;1!UBERON:0002134;2.74e-07;1!UBERON:0008811;2.74e-07;1!UBERON:0005208;2.74e-07;1!UBERON:0004145;2.74e-07;1!UBERON:0005946;2.74e-07;1!UBERON:0005965;2.74e-07;1!UBERON:0002078;2.74e-07;1!UBERON:0002199;5.12e-07;46!UBERON:0002416;5.12e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.64e-12,8;UBERON:0000982,1.64e-12,8;UBERON:0004770,1.64e-12,8;UBERON:0006915,1.20e-09,3;UBERON:0007616,1.20e-09,3;UBERON:0002217,1.20e-09,3;UBERON:0002018,1.20e-09,3;UBERON:0002199,2.24e-09,46;UBERON:0002416,2.24e-09,46;UBERON:0007846,2.43e-09,3;UBERON:0000043,2.43e-09,3;UBERON:0007845,2.43e-09,3;UBERON:0002242,1.09e-08,3;UBERON:0003068,1.09e-08,3;UBERON:0002328,1.09e-08,3;UBERON:0004880,1.09e-08,3;UBERON:0002097,1.91e-08,41;UBERON:0002384,1.56e-07,371;UBERON:0000989,2.21e-07,1;UBERON:0008811,2.21e-07,1;UBERON:0006258,2.21e-07,1;UBERON:0005876,2.21e-07,1;UBERON:0004874,2.21e-07,1;UBERON:0002134,2.83e-07,1;UBERON:0005208,2.83e-07,1;UBERON:0005946,2.83e-07,1;UBERON:0005965,2.83e-07,1;UBERON:0002078,2.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,2.08948502559871,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.132409180813219,1.72101972449288,0,0.560677600142307,0,1.48000529050296,0,0.269421344139376,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,1.48360157567134,0.910161361938026,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0.89694817844431,0,1.05965950579781,0.600182192168805,1.13357782162283,0.772921620136887,0.930584281657949,1.18143432568886,2.24105111870757,0.252433774244115,0.552299391853796,6.62748832957129,2.4850671476163,2.41805035746337,2.37384829234683,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,1.2269149171914,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,1.56640925970192,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0.38126038784765,0,0.42793898803392,0.636406495851874,0,0,1.09814811894422,0.117812402345686,0,0,0,0,0.487426979262569,0,0.272999822815972,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,3.58882980006029,10.8667314676768,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.236417121897595,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,2.3854323049959,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,6.54076544556695,1.77962244319307,0.686520205190771,1.36107831386915,0.310874401165561,0.443565449968902,0,0,0,0.829412415681711,0.797525143673985,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0.212574920101683,0.743614585554013,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0.679708458751268,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,2.23197010900051,2.31087814315709,0.432626562123789,0,0,0,0.101988829741982,0,0,0.250707539292375,0.0757786982182394,0,0,0,0.639701945702943,0.23806443146374,0.129177819672012,0,0,0.12729431655633,0,0.870866991587845,0,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0.603821380773079,0 | |||
|short_description=p@chr10:44873195..44873209,- | |||
}} |
Revision as of 13:27, 10 September 2013
Short description: | p@chr10:44873195..44873209, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:44873195..44873209, - |
Coexpression cluster: | C873_Cardiac_Synoviocyte_Fibroblast_tridermal_mesenchymal_tenocyte_liposarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.70e-16 | 23 |
fibroblast | 5.75e-15 | 76 |
central nervous system pericyte | 1.42e-13 | 2 |
synovial cell | 1.20e-09 | 3 |
fibrocyte | 2.43e-09 | 3 |
tendon cell | 2.43e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 1.09e-08 | 3 |
stromal cell | 1.90e-07 | 28 |
pericyte cell | 3.31e-07 | 4 |
GAG secreting cell | 9.01e-07 | 9 |
carbohydrate secreting cell | 9.01e-07 | 9 |
extracellular matrix secreting cell | 9.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.64e-12 | 8 |
skeletal joint | 1.64e-12 | 8 |
articular system | 1.64e-12 | 8 |
stratified squamous epithelium | 1.20e-09 | 3 |
layer of synovial tissue | 1.20e-09 | 3 |
synovial joint | 1.20e-09 | 3 |
synovial membrane of synovial joint | 1.20e-09 | 3 |
integument | 2.24e-09 | 46 |
integumental system | 2.24e-09 | 46 |
dense regular connective tissue | 2.43e-09 | 3 |
tendon | 2.43e-09 | 3 |
regular connective tissue | 2.43e-09 | 3 |
nucleus pulposus | 1.09e-08 | 3 |
axial mesoderm | 1.09e-08 | 3 |
notochord | 1.09e-08 | 3 |
chordamesoderm | 1.09e-08 | 3 |
skin of body | 1.91e-08 | 41 |
connective tissue | 1.56e-07 | 371 |
penis | 2.21e-07 | 1 |
intromittent organ | 2.21e-07 | 1 |
lateral plate mesenchyme | 2.21e-07 | 1 |
undifferentiated genital tubercle | 2.21e-07 | 1 |
somatopleure | 2.21e-07 | 1 |
tricuspid valve | 2.83e-07 | 1 |
right atrium valve | 2.83e-07 | 1 |
outflow tract of atrium | 2.83e-07 | 1 |
outflow part of right atrium | 2.83e-07 | 1 |
right cardiac atrium | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.07e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.