FFCP PHASE1:Hg19::chr10:28033614..28033628,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C199|description=CAGE_peak_at_chr10:28033614..28033628,-|id=chr10:28033614..28033628,-|ontology_enrichment_celltype=CL:0000057!3.68e-12!75;CL:0002620!1.37e-10!23;CL:0002556!2.03e-10!6;CL:0002552!1.67e-08!5|ontology_enrichment_celltype_v019=CL:0000135;4.41e-17;3!CL:0000388;4.41e-17;3!CL:0002622;5.99e-17;3!CL:0002556;1.89e-15;6!CL:0000499;1.63e-11;28!CL:0002620;4.94e-11;23!CL:0002552;6.12e-11;5!CL:0002574;3.67e-07;1|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-17,76;CL:0000135,2.99e-17,3;CL:0000388,2.99e-17,3;CL:0002622,5.22e-17,3;CL:0002556,2.33e-15,6;CL:0000499,1.41e-11,28;CL:0002620,4.91e-11,23;CL:0002552,5.35e-11,5;CL:0002574,3.57e-07,1|ontology_enrichment_development_v019=UBERON:0003099;6.20e-07;1!UBERON:0003852;6.20e-07;1|ontology_enrichment_disease=DOID:17!2.46e-08!5;DOID:450!2.46e-08!5;DOID:66!2.46e-08!5;DOID:423!2.46e-08!5;DOID:0080000!2.46e-08!5;DOID:11722!2.46e-08!5|ontology_enrichment_disease_v019=DOID:6193;4.51e-07;1!DOID:4235;6.20e-07;1|ontology_enrichment_disease_v019_2=DOID:6193,4.25e-07,1;DOID:4235,6.38e-07,1|ontology_enrichment_uberon=UBERON:0003102!1.85e-13!95;UBERON:0001758!2.03e-10!6;UBERON:0003672!2.03e-10!6;UBERON:0000162!5.63e-09!14;UBERON:0001353!5.63e-09!14;UBERON:0000163!5.63e-09!14;UBERON:0006866!5.63e-09!14;UBERON:0000164!5.63e-09!14;UBERON:0000931!5.63e-09!14;UBERON:0000075!6.96e-09!13;UBERON:0005944!6.96e-09!13;UBERON:0004288!6.96e-09!13;UBERON:0003089!6.96e-09!13;UBERON:0004122!3.21e-08!15;UBERON:0007023!4.60e-08!115;UBERON:0000161!1.89e-07!35;UBERON:0000475!2.02e-07!365;UBERON:0003129!5.02e-07!11|ontology_enrichment_uberon_v019=UBERON:0007846;4.41e-17;3!UBERON:0000043;4.41e-17;3!UBERON:0007845;4.41e-17;3!UBERON:0001758;1.89e-15;6!UBERON:0003672;1.89e-15;6!UBERON:0003129;2.90e-13;7!UBERON:0011137;9.21e-13;11!UBERON:0010323;9.21e-13;11!UBERON:0000165;3.91e-09;28!UBERON:0000075;1.07e-08;16!UBERON:0002367;3.32e-08;11!UBERON:0010147;3.32e-08;11!UBERON:0003937;1.58e-07;12!UBERON:0005399;1.58e-07;12!UBERON:0001828;5.35e-07;8!UBERON:0005705;6.20e-07;1!UBERON:0008193;6.20e-07;1!UBERON:0010912;6.20e-07;1!UBERON:0002514;6.20e-07;1!UBERON:0003457;6.20e-07;1!UBERON:0008907;6.20e-07;1!UBERON:0008001;6.20e-07;1!UBERON:0007213;6.20e-07;1!UBERON:0009891;6.20e-07;1!UBERON:0007914;6.20e-07;1!UBERON:0007375;6.20e-07;1!UBERON:0003323;6.20e-07;1!UBERON:0010258;6.20e-07;1!UBERON:0005253;6.20e-07;1!UBERON:0007842;6.20e-07;1!UBERON:0002397;6.20e-07;1!UBERON:0003113;6.20e-07;1!UBERON:0003277;6.20e-07;1!UBERON:0001709;6.20e-07;1!UBERON:0002244;6.20e-07;1!UBERON:0005620;6.20e-07;1!UBERON:0010364;6.20e-07;1!UBERON:0004288;6.20e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.99e-17,3;UBERON:0000043,2.99e-17,3;UBERON:0007845,2.99e-17,3;UBERON:0003102,2.74e-16,99;UBERON:0001758,2.33e-15,6;UBERON:0003672,2.33e-15,6;UBERON:0003129,3.46e-13,7;UBERON:0010323,1.02e-12,11;UBERON:0000165,2.18e-11,29;UBERON:0000930,2.18e-11,29;UBERON:0011137,6.09e-10,14;UBERON:0000161,8.16e-09,36;UBERON:0000075,1.15e-08,16;UBERON:0002367,3.23e-08,11;UBERON:0010147,3.23e-08,11;UBERON:0009846,3.23e-08,11;UBERON:0003353,3.23e-08,11;UBERON:0004902,3.23e-08,11;UBERON:0003820,3.23e-08,11;UBERON:0009847,3.23e-08,11;UBERON:0001444,7.68e-08,49;UBERON:0003937,1.54e-07,12;UBERON:0005399,1.54e-07,12;UBERON:0001828,4.93e-07,8;UBERON:0005705,5.69e-07,1;UBERON:0008193,5.69e-07,1;UBERON:0010912,5.69e-07,1;UBERON:0002514,5.69e-07,1;UBERON:0003457,5.69e-07,1;UBERON:0008907,5.69e-07,1;UBERON:0008001,5.69e-07,1;UBERON:0007213,5.69e-07,1;UBERON:0009891,5.69e-07,1;UBERON:0007914,5.69e-07,1;UBERON:0009292,5.69e-07,1;UBERON:0003099,5.69e-07,1;UBERON:0007375,5.69e-07,1;UBERON:0003323,5.69e-07,1;UBERON:0010258,5.69e-07,1;UBERON:0007842,5.69e-07,1;UBERON:0009494,5.69e-07,1;UBERON:0010042,5.69e-07,1;UBERON:0010045,5.69e-07,1;UBERON:0010259,5.69e-07,1;UBERON:0010359,5.69e-07,1;UBERON:0009526,5.69e-07,1;UBERON:0002397,5.69e-07,1;UBERON:0003113,5.69e-07,1;UBERON:0003277,5.69e-07,1;UBERON:0001709,5.69e-07,1;UBERON:0004066,5.69e-07,1;UBERON:0002244,5.69e-07,1;UBERON:0005620,5.69e-07,1;UBERON:0004362,5.69e-07,1;UBERON:0010364,5.69e-07,1;UBERON:0010046,5.69e-07,1;UBERON:0005868,5.69e-07,1;UBERON:0007238,5.69e-07,1;UBERON:0004288,5.69e-07,1;UBERON:0004068,5.69e-07,1;UBERON:0010334,5.69e-07,1;UBERON:0003852,5.69e-07,1;UBERON:0010253,5.69e-07,1|phase1_expression=0.54503513781167,0.856402095563933,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr10:28033614..28033628,- | |||
|id=chr10:28033614..28033628,- | |||
|ontology_enrichment_celltype=CL:0000057!3.68e-12!75;CL:0002620!1.37e-10!23;CL:0002556!2.03e-10!6;CL:0002552!1.67e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.41e-17;3!CL:0000388;4.41e-17;3!CL:0002622;5.99e-17;3!CL:0002556;1.89e-15;6!CL:0000499;1.63e-11;28!CL:0002620;4.94e-11;23!CL:0002552;6.12e-11;5!CL:0002574;3.67e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-17,76;CL:0000135,2.99e-17,3;CL:0000388,2.99e-17,3;CL:0002622,5.22e-17,3;CL:0002556,2.33e-15,6;CL:0000499,1.41e-11,28;CL:0002620,4.91e-11,23;CL:0002552,5.35e-11,5;CL:0002574,3.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;6.20e-07;1!UBERON:0003852;6.20e-07;1 | |||
|ontology_enrichment_disease=DOID:17!2.46e-08!5;DOID:450!2.46e-08!5;DOID:66!2.46e-08!5;DOID:423!2.46e-08!5;DOID:0080000!2.46e-08!5;DOID:11722!2.46e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:6193;4.51e-07;1!DOID:4235;6.20e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.25e-07,1;DOID:4235,6.38e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.85e-13!95;UBERON:0001758!2.03e-10!6;UBERON:0003672!2.03e-10!6;UBERON:0000162!5.63e-09!14;UBERON:0001353!5.63e-09!14;UBERON:0000163!5.63e-09!14;UBERON:0006866!5.63e-09!14;UBERON:0000164!5.63e-09!14;UBERON:0000931!5.63e-09!14;UBERON:0000075!6.96e-09!13;UBERON:0005944!6.96e-09!13;UBERON:0004288!6.96e-09!13;UBERON:0003089!6.96e-09!13;UBERON:0004122!3.21e-08!15;UBERON:0007023!4.60e-08!115;UBERON:0000161!1.89e-07!35;UBERON:0000475!2.02e-07!365;UBERON:0003129!5.02e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.41e-17;3!UBERON:0000043;4.41e-17;3!UBERON:0007845;4.41e-17;3!UBERON:0001758;1.89e-15;6!UBERON:0003672;1.89e-15;6!UBERON:0003129;2.90e-13;7!UBERON:0011137;9.21e-13;11!UBERON:0010323;9.21e-13;11!UBERON:0000165;3.91e-09;28!UBERON:0000075;1.07e-08;16!UBERON:0002367;3.32e-08;11!UBERON:0010147;3.32e-08;11!UBERON:0003937;1.58e-07;12!UBERON:0005399;1.58e-07;12!UBERON:0001828;5.35e-07;8!UBERON:0005705;6.20e-07;1!UBERON:0008193;6.20e-07;1!UBERON:0010912;6.20e-07;1!UBERON:0002514;6.20e-07;1!UBERON:0003457;6.20e-07;1!UBERON:0008907;6.20e-07;1!UBERON:0008001;6.20e-07;1!UBERON:0007213;6.20e-07;1!UBERON:0009891;6.20e-07;1!UBERON:0007914;6.20e-07;1!UBERON:0007375;6.20e-07;1!UBERON:0003323;6.20e-07;1!UBERON:0010258;6.20e-07;1!UBERON:0005253;6.20e-07;1!UBERON:0007842;6.20e-07;1!UBERON:0002397;6.20e-07;1!UBERON:0003113;6.20e-07;1!UBERON:0003277;6.20e-07;1!UBERON:0001709;6.20e-07;1!UBERON:0002244;6.20e-07;1!UBERON:0005620;6.20e-07;1!UBERON:0010364;6.20e-07;1!UBERON:0004288;6.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.99e-17,3;UBERON:0000043,2.99e-17,3;UBERON:0007845,2.99e-17,3;UBERON:0003102,2.74e-16,99;UBERON:0001758,2.33e-15,6;UBERON:0003672,2.33e-15,6;UBERON:0003129,3.46e-13,7;UBERON:0010323,1.02e-12,11;UBERON:0000165,2.18e-11,29;UBERON:0000930,2.18e-11,29;UBERON:0011137,6.09e-10,14;UBERON:0000161,8.16e-09,36;UBERON:0000075,1.15e-08,16;UBERON:0002367,3.23e-08,11;UBERON:0010147,3.23e-08,11;UBERON:0009846,3.23e-08,11;UBERON:0003353,3.23e-08,11;UBERON:0004902,3.23e-08,11;UBERON:0003820,3.23e-08,11;UBERON:0009847,3.23e-08,11;UBERON:0001444,7.68e-08,49;UBERON:0003937,1.54e-07,12;UBERON:0005399,1.54e-07,12;UBERON:0001828,4.93e-07,8;UBERON:0005705,5.69e-07,1;UBERON:0008193,5.69e-07,1;UBERON:0010912,5.69e-07,1;UBERON:0002514,5.69e-07,1;UBERON:0003457,5.69e-07,1;UBERON:0008907,5.69e-07,1;UBERON:0008001,5.69e-07,1;UBERON:0007213,5.69e-07,1;UBERON:0009891,5.69e-07,1;UBERON:0007914,5.69e-07,1;UBERON:0009292,5.69e-07,1;UBERON:0003099,5.69e-07,1;UBERON:0007375,5.69e-07,1;UBERON:0003323,5.69e-07,1;UBERON:0010258,5.69e-07,1;UBERON:0007842,5.69e-07,1;UBERON:0009494,5.69e-07,1;UBERON:0010042,5.69e-07,1;UBERON:0010045,5.69e-07,1;UBERON:0010259,5.69e-07,1;UBERON:0010359,5.69e-07,1;UBERON:0009526,5.69e-07,1;UBERON:0002397,5.69e-07,1;UBERON:0003113,5.69e-07,1;UBERON:0003277,5.69e-07,1;UBERON:0001709,5.69e-07,1;UBERON:0004066,5.69e-07,1;UBERON:0002244,5.69e-07,1;UBERON:0005620,5.69e-07,1;UBERON:0004362,5.69e-07,1;UBERON:0010364,5.69e-07,1;UBERON:0010046,5.69e-07,1;UBERON:0005868,5.69e-07,1;UBERON:0007238,5.69e-07,1;UBERON:0004288,5.69e-07,1;UBERON:0004068,5.69e-07,1;UBERON:0010334,5.69e-07,1;UBERON:0003852,5.69e-07,1;UBERON:0010253,5.69e-07,1 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,1.71968044236475,0.413303124703062,11.8800285728205,7.91254173691382,0,0,0.841680569770331,0.500474079487857,1.10825646193673,7.02364193409341,3.98434134538726,4.35690370829131,0,0.717558542755448,1.2813443329114,0.423863802319124,0.600182192168805,1.13357782162283,5.92573242104947,9.30584281657949,0,0,0.252433774244115,2.02509777013059,0,2.84007674013291,1.81353776809752,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.713715955188647,0.630809660135739,0.234282829985426,0,2.27407504055985,3.10419213877515,0,0.368738337083406,4.43106433787223,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,2.06666006696292,1.45672934405374,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,3.68549760801562,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33322905892992,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,1.74301541630384,1.25481369850743,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,3.78369271437556,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0,0.72045208577053,0,0,0,0,0.235694034616795,25.2781823296922,30.3348254305766,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,2.82140754952547,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0.825788063434183,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.202612753855184,0.781078098613847,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0.627944742804112,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0.45178432815584,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,2.20905249094162,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,3.71995018166751,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,1.28072815053259,13.5150597600858,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr10:28033614..28033628,- | |||
}} |
Revision as of 13:01, 10 September 2013
Short description: | p@chr10:28033614..28033628, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28033614..28033628, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-17 | 76 |
fibrocyte | 2.99e-17 | 3 |
tendon cell | 2.99e-17 | 3 |
prostate stromal cell | 5.22e-17 | 3 |
fibroblast of periodontium | 2.33e-15 | 6 |
stromal cell | 1.41e-11 | 28 |
skin fibroblast | 4.91e-11 | 23 |
fibroblast of gingiva | 5.35e-11 | 5 |
stromal cell of pancreas | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.25e-07 | 1 |
spindle cell sarcoma | 6.38e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.