FFCP PHASE1:Hg19::chr14:107254012..107254031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000817!1.04e-09!3;CL:0000453!1.23e-09!5;CL:0000181!5.13e-09!12;CL:0000417!5.13e-09!12;CL:0000668!5.13e-09!12;CL:0000414!5.13e-09!12;CL:0000412!5.13e-09!12;CL:0000182!5.13e-09!12;CL:0000451!5.97e-09!10;CL:0000223!9.77e-09!59;CL:0000990!7.07e-08!8;CL:0001014!1.40e-07!2;CL:0001016!1.40e-07!2;CL:0000785!6.32e-07!2;CL:0000955!6.32e-07!2;CL:0000818!6.32e-07!2;CL:0000954!6.32e-07!2;CL:0000816!6.32e-07!2 | |ontology_enrichment_celltype=CL:0000817!1.04e-09!3;CL:0000453!1.23e-09!5;CL:0000181!5.13e-09!12;CL:0000417!5.13e-09!12;CL:0000668!5.13e-09!12;CL:0000414!5.13e-09!12;CL:0000412!5.13e-09!12;CL:0000182!5.13e-09!12;CL:0000451!5.97e-09!10;CL:0000223!9.77e-09!59;CL:0000990!7.07e-08!8;CL:0001014!1.40e-07!2;CL:0001016!1.40e-07!2;CL:0000785!6.32e-07!2;CL:0000955!6.32e-07!2;CL:0000818!6.32e-07!2;CL:0000954!6.32e-07!2;CL:0000816!6.32e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.26e-23;2!CL:0001016;1.26e-23;2!CL:0000182;5.20e-23;12!CL:0000817;3.08e-12;1!CL:0000037;3.08e-12;1!CL:0001024;3.08e-12;1!CL:0000453;4.97e-10;5!CL:0000840;1.67e-08;5!CL:0002535;6.24e-07;2 | |ontology_enrichment_celltype_v019=CL:0001014;1.26e-23;2!CL:0001016;1.26e-23;2!CL:0000182;5.20e-23;12!CL:0000817;3.08e-12;1!CL:0000037;3.08e-12;1!CL:0001024;3.08e-12;1!CL:0000453;4.97e-10;5!CL:0000840;1.67e-08;5!CL:0002535;6.24e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.13e-23,2;CL:0001016,1.13e-23,2;CL:0000182,3.52e-23,12;CL:0001024,3.08e-12,1;CL:0000453,4.76e-10,5;CL:0000840,1.61e-08,5;CL:0001029,1.61e-08,5;CL:0002535,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.07e-36;11!UBERON:0009497;2.50e-30;13!UBERON:0006242;1.32e-12;1!UBERON:0003104;7.68e-12;31!UBERON:0001041;3.57e-09;30!UBERON:0006595;1.63e-07;86 | |ontology_enrichment_development_v019=UBERON:0004161;7.07e-36;11!UBERON:0009497;2.50e-30;13!UBERON:0006242;1.32e-12;1!UBERON:0003104;7.68e-12;31!UBERON:0001041;3.57e-09;30!UBERON:0006595;1.63e-07;86 | ||
|ontology_enrichment_disease=DOID:305!2.12e-08!106;DOID:0050687!6.43e-07!143;DOID:4929!7.53e-07!2 | |ontology_enrichment_disease=DOID:305!2.12e-08!106;DOID:0050687!6.43e-07!143;DOID:4929!7.53e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:7,4.48e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009854!2.97e-11!23;UBERON:0009497!2.49e-10!25;UBERON:0000015!2.49e-10!25;UBERON:0002423!2.49e-10!25;UBERON:0006235!2.49e-10!25;UBERON:0004161!2.49e-10!25;UBERON:0004921!4.70e-10!129;UBERON:0004185!4.70e-10!129;UBERON:0009856!1.05e-09!26;UBERON:0008835!1.20e-09!22;UBERON:0003894!1.20e-09!22;UBERON:0003929!8.79e-09!54;UBERON:0007499!2.84e-08!25;UBERON:0004119!3.10e-08!169;UBERON:0000925!3.10e-08!169;UBERON:0006595!3.10e-08!169;UBERON:0001007!4.42e-08!155;UBERON:0001555!4.42e-08!155;UBERON:0007026!4.42e-08!155;UBERON:0005911!4.96e-08!82;UBERON:0002394!5.59e-07!4;UBERON:0003928!5.59e-07!4;UBERON:0002294!6.80e-07!7;UBERON:0001173!6.80e-07!7;UBERON:0004912!6.80e-07!7 | |ontology_enrichment_uberon=UBERON:0009854!2.97e-11!23;UBERON:0009497!2.49e-10!25;UBERON:0000015!2.49e-10!25;UBERON:0002423!2.49e-10!25;UBERON:0006235!2.49e-10!25;UBERON:0004161!2.49e-10!25;UBERON:0004921!4.70e-10!129;UBERON:0004185!4.70e-10!129;UBERON:0009856!1.05e-09!26;UBERON:0008835!1.20e-09!22;UBERON:0003894!1.20e-09!22;UBERON:0003929!8.79e-09!54;UBERON:0007499!2.84e-08!25;UBERON:0004119!3.10e-08!169;UBERON:0000925!3.10e-08!169;UBERON:0006595!3.10e-08!169;UBERON:0001007!4.42e-08!155;UBERON:0001555!4.42e-08!155;UBERON:0007026!4.42e-08!155;UBERON:0005911!4.96e-08!82;UBERON:0002394!5.59e-07!4;UBERON:0003928!5.59e-07!4;UBERON:0002294!6.80e-07!7;UBERON:0001173!6.80e-07!7;UBERON:0004912!6.80e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.22e-15;25!UBERON:0002107;1.57e-14;19!UBERON:0006925;1.57e-14;19!UBERON:0000160;4.79e-10;17!UBERON:0002365;1.43e-08;31!UBERON:0002330;1.43e-08;31!UBERON:0005409;6.66e-08;22!UBERON:0002368;1.01e-07;33!UBERON:0006955;6.24e-07;2!UBERON:0004801;6.24e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002423;1.22e-15;25!UBERON:0002107;1.57e-14;19!UBERON:0006925;1.57e-14;19!UBERON:0000160;4.79e-10;17!UBERON:0002365;1.43e-08;31!UBERON:0002330;1.43e-08;31!UBERON:0005409;6.66e-08;22!UBERON:0002368;1.01e-07;33!UBERON:0006955;6.24e-07;2!UBERON:0004801;6.24e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,9.93e-16,25;UBERON:0000015,9.93e-16,25;UBERON:0002423,9.93e-16,25;UBERON:0006235,9.93e-16,25;UBERON:0004161,9.93e-16,25;UBERON:0002107,1.23e-14,19;UBERON:0006925,1.23e-14,19;UBERON:0008836,1.23e-14,19;UBERON:0008835,1.24e-12,22;UBERON:0003894,1.24e-12,22;UBERON:0009854,4.43e-12,23;UBERON:0007499,4.16e-11,25;UBERON:0009856,1.12e-10,26;UBERON:0000160,4.74e-10,17;UBERON:0003929,1.81e-09,54;UBERON:0002365,6.16e-09,31;UBERON:0002330,6.16e-09,31;UBERON:0002368,6.70e-08,35;UBERON:0005172,4.51e-07,54;UBERON:0005173,4.51e-07,54;UBERON:0005409,5.17e-07,25;UBERON:0006955,7.20e-07,2;UBERON:0004801,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.47586126251736,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988449083511,0,0.159426272728822,0,0.5745161103971,1.2700414963433,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0.246169610922139,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,3.98104772431402,1.50377859655677,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.20592910460226,1.64831716762333,2.02210631562555,1.57483970423598,0.169346664131569,0,0,0,0,0,3.37460837327251,2.32140586367385,0,0,0.0788057072991982,0.786818822024972,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,0,0,4.06844988788438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.853425474875886,0,0,0,0,0,0.198950775161368,0,0,0,0,1.08043821351123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0.538951212639521,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,1.46800219667424,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.47586126251736,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988449083511,0,0.159426272728822,0,0.5745161103971,1.2700414963433,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0.246169610922139,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0,3.98104772431402,1.50377859655677,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.20592910460226,1.64831716762333,2.02210631562555,1.57483970423598,0.169346664131569,0,0,0,0,0,3.37460837327251,2.32140586367385,0,0,0.0788057072991982,0.786818822024972,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,0,0,4.06844988788438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.853425474875886,0,0,0,0,0,0.198950775161368,0,0,0,0,1.08043821351123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p@chr14:107254012..107254031,+ | |short_description=p@chr14:107254012..107254031,+ | ||
}} | }} |
Revision as of 07:16, 21 November 2012
Short description: | p@chr14:107254012..107254031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:107254012..107254031, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.13e-23 | 2 |
immature CD1a-positive Langerhans cell | 1.13e-23 | 2 |
hepatocyte | 3.52e-23 | 12 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.08e-12 | 1 |
Langerhans cell | 4.76e-10 | 5 |
immature conventional dendritic cell | 1.61e-08 | 5 |
common dendritic progenitor | 1.61e-08 | 5 |
epithelial cell of cervix | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 9.93e-16 | 25 |
anatomical boundary | 9.93e-16 | 25 |
hepatobiliary system | 9.93e-16 | 25 |
foregut-midgut junction | 9.93e-16 | 25 |
septum transversum | 9.93e-16 | 25 |
liver | 1.23e-14 | 19 |
digestive gland | 1.23e-14 | 19 |
liver bud | 1.23e-14 | 19 |
hepatic diverticulum | 1.24e-12 | 22 |
liver primordium | 1.24e-12 | 22 |
digestive tract diverticulum | 4.43e-12 | 23 |
epithelial sac | 4.16e-11 | 25 |
sac | 1.12e-10 | 26 |
intestine | 4.74e-10 | 17 |
gut epithelium | 1.81e-09 | 54 |
exocrine gland | 6.16e-09 | 31 |
exocrine system | 6.16e-09 | 31 |
endocrine gland | 6.70e-08 | 35 |
abdomen element | 4.51e-07 | 54 |
abdominal segment element | 4.51e-07 | 54 |
gastrointestinal system | 5.17e-07 | 25 |
uterine epithelium | 7.20e-07 | 2 |
cervix epithelium | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.48e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.