FFCP PHASE1:Hg19::chr6:31760589..31760623,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.96e-23!254;CL:0002076!4.65e-09!43;CL:1000507!8.73e-09!12;CL:1000494!8.73e-09!12;CL:1000449!5.66e-07!16 | |ontology_enrichment_celltype=CL:0000066!3.96e-23!254;CL:0002076!4.65e-09!43;CL:1000507!8.73e-09!12;CL:1000494!8.73e-09!12;CL:1000449!5.66e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.51e-12;15!CL:1000507;1.15e-10;10!CL:1000494;1.15e-10;10!CL:1000497;3.14e-10;17!CL:0002518;3.14e-10;17!CL:0002681;1.38e-08;12!CL:0002584;1.38e-08;12 | |ontology_enrichment_celltype_v019=CL:1000449;8.51e-12;15!CL:1000507;1.15e-10;10!CL:1000494;1.15e-10;10!CL:1000497;3.14e-10;17!CL:0002518;3.14e-10;17!CL:0002681;1.38e-08;12!CL:0002584;1.38e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.25e-18,253;CL:1000449,9.99e-12,15;CL:1000507,1.24e-10,10;CL:1000494,1.24e-10,10;CL:1000497,3.60e-10,17;CL:0002518,3.60e-10,17;CL:0002681,1.67e-08,12;CL:0002584,1.67e-08,12;CL:0000076,1.15e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.43e-12!143;DOID:305!2.51e-12!106;DOID:1749!7.13e-08!14;DOID:162!3.93e-07!235 | |ontology_enrichment_disease=DOID:0050687!2.43e-12!143;DOID:305!2.51e-12!106;DOID:1749!7.13e-08!14;DOID:162!3.93e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.16e-15;14!DOID:3493;3.36e-07;2 | |ontology_enrichment_disease_v019=DOID:1749;1.16e-15;14!DOID:3493;3.36e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.50e-15,14;DOID:305,8.84e-12,106;DOID:0050687,2.75e-11,143;DOID:3493,3.19e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!8.73e-09!12;UBERON:0001231!8.73e-09!12;UBERON:0004810!8.73e-09!12;UBERON:0000064!1.04e-08!219;UBERON:0004211!5.66e-07!16;UBERON:0001285!5.66e-07!16;UBERON:0007684!5.66e-07!16;UBERON:0003220!5.66e-07!16;UBERON:0004208!5.66e-07!16 | |ontology_enrichment_uberon=UBERON:0009773!8.73e-09!12;UBERON:0001231!8.73e-09!12;UBERON:0004810!8.73e-09!12;UBERON:0000064!1.04e-08!219;UBERON:0004211!5.66e-07!16;UBERON:0001285!5.66e-07!16;UBERON:0007684!5.66e-07!16;UBERON:0003220!5.66e-07!16;UBERON:0004208!5.66e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.51e-12;15!UBERON:0004819;8.51e-12;15!UBERON:0001285;8.51e-12;15!UBERON:0007684;8.51e-12;15!UBERON:0004211;1.15e-10;10!UBERON:0009773;1.15e-10;10!UBERON:0001231;1.15e-10;10!UBERON:0004810;1.15e-10;10!UBERON:0006554;1.04e-09;30!UBERON:0001008;1.04e-09;30!UBERON:0001225;1.38e-08;12!UBERON:0008987;1.38e-08;12!UBERON:0002113;1.61e-08;24!UBERON:0011143;1.61e-08;24!UBERON:0000489;2.17e-08;29!UBERON:0002394;2.40e-07;4!UBERON:0003928;2.40e-07;4!UBERON:0002294;7.19e-07;7!UBERON:0001173;7.19e-07;7!UBERON:0000007;9.85e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0006555;8.51e-12;15!UBERON:0004819;8.51e-12;15!UBERON:0001285;8.51e-12;15!UBERON:0007684;8.51e-12;15!UBERON:0004211;1.15e-10;10!UBERON:0009773;1.15e-10;10!UBERON:0001231;1.15e-10;10!UBERON:0004810;1.15e-10;10!UBERON:0006554;1.04e-09;30!UBERON:0001008;1.04e-09;30!UBERON:0001225;1.38e-08;12!UBERON:0008987;1.38e-08;12!UBERON:0002113;1.61e-08;24!UBERON:0011143;1.61e-08;24!UBERON:0000489;2.17e-08;29!UBERON:0002394;2.40e-07;4!UBERON:0003928;2.40e-07;4!UBERON:0002294;7.19e-07;7!UBERON:0001173;7.19e-07;7!UBERON:0000007;9.85e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,9.99e-12,15;UBERON:0009773,9.99e-12,15;UBERON:0001231,9.99e-12,15;UBERON:0001285,9.99e-12,15;UBERON:0007684,9.99e-12,15;UBERON:0004208,9.99e-12,15;UBERON:0006555,6.71e-11,16;UBERON:0004819,6.71e-11,16;UBERON:0004810,1.24e-10,10;UBERON:0006554,1.81e-10,47;UBERON:0001008,3.56e-10,48;UBERON:0001225,1.67e-08,12;UBERON:0008987,1.67e-08,12;UBERON:0002113,1.16e-07,26;UBERON:0003918,1.16e-07,26;UBERON:0011143,1.16e-07,26;UBERON:0005095,1.16e-07,26;UBERON:0007687,1.16e-07,26;UBERON:0000489,1.20e-07,31;UBERON:0003100,2.99e-07,41 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,2.71085326900425,2.58827807116751,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.189069634328136,0,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.976248230192678,0,0,0.17859945656816,0,0.225222960966644,0,0,0.366403487860815,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,1.97334038733728,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0.773043412653187,0.545492241181669,0.860413786167011,0.487894824518382,0,0,0.10366105501537,0,0,0,0,0,0,0,1.0647612003586,0.842923450390509,0.723033089650446,0.882351781859152,0.217879444092406,0.949082476444386,0.808987848960987,0.392442930250692,0.769494313892781,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,1.42675371031213,1.1240175325762,0.301586917234893,0.925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0,1.16426079513703,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.468565659970853,0,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,2.72814814301633,0,2.11673205330776,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.601519410909855,0.552485933615378,0,0,0.131124414959424,2.70719767744447,0.770153371044148,3.13739907670742,2.92278449306521,0.844413031143006,0,1.19065593693561,0,0,0.812839312631559,2.00675909541941,0.764628819135115,3.3243040357149,4.02974558499921,0,0,0,0,0,0,0.183138929636687,0,0.574265537996172,1.30012049207304,0,0,0.770243085573222,0,0,0,0.145016693914229,0,0,0.330569830721956,0.576570202095319,1.27612712494584,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.563391205064483,0,0,0,1.06428319221179,0,0,0.379473173765715,0,0.769776901804097,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0.846694330895531,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0,0.71623345421307,0.593929361665277,0.307160702099232,0,0.281338832821026,0.111308705022906,4.28490072989575,0.211125408127993,0,0,0,0,0,0,3.32512899245109,1.43216939740487,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,1.593108275997,1.01701460117107,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,0,0,0.313265848516366,0,0,0,0.364909578431332,0,0,0,0,0,0,1.20258735531594,0.103688191397247,0.664653872707185,0,0,0,1.70765727617876,0,0,1.27390116638691,1.13176968554523,0,1.20390222730132,0.19351266257817,0.146178634172371,0.164230914106418,0,0,0.225980740780532,1.78154502040776,0.596143835108969,0.126621591911757,0.782205530939212,0.961905843018405,1.49417096317547,0.999048047910651,0.144090417154106,0,0,4.89786313159709,5.21860649374817,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0.275078873194468,0,0.449947783103001,1.5476039091159,0.0607495566580247,0,0.236417121897595,0,0.422401346077626,0,1.15149118391667,0,0,0,0,0,0,4.7892076624995,0.082092520749339,0.340776043570843,0,0.439656701034247,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0,0,0,0,0.395223263795889,0.121792598380896,5.74507131993164,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0.310482014706917,0.138348634936231,0.624902039810533,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,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| ||
|short_description=p9@VARS | |short_description=p9@VARS | ||
}} | }} |
Revision as of 03:31, 21 November 2012
Short description: | p9@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_ENST00000495010_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.25e-18 | 253 |
epithelial cell of nephron | 9.99e-12 | 15 |
kidney tubule cell | 1.24e-10 | 10 |
nephron tubule epithelial cell | 1.24e-10 | 10 |
kidney cell | 3.60e-10 | 17 |
kidney epithelial cell | 3.60e-10 | 17 |
kidney cortical cell | 1.67e-08 | 12 |
renal cortical epithelial cell | 1.67e-08 | 12 |
squamous epithelial cell | 1.15e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 9.99e-12 | 15 |
renal tubule | 9.99e-12 | 15 |
nephron tubule | 9.99e-12 | 15 |
nephron | 9.99e-12 | 15 |
uriniferous tubule | 9.99e-12 | 15 |
nephrogenic mesenchyme | 9.99e-12 | 15 |
excretory tube | 6.71e-11 | 16 |
kidney epithelium | 6.71e-11 | 16 |
nephron tubule epithelium | 1.24e-10 | 10 |
urinary system structure | 1.81e-10 | 47 |
renal system | 3.56e-10 | 48 |
cortex of kidney | 1.67e-08 | 12 |
renal parenchyma | 1.67e-08 | 12 |
kidney | 1.16e-07 | 26 |
kidney mesenchyme | 1.16e-07 | 26 |
upper urinary tract | 1.16e-07 | 26 |
kidney rudiment | 1.16e-07 | 26 |
kidney field | 1.16e-07 | 26 |
cavitated compound organ | 1.20e-07 | 31 |
female organism | 2.99e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.50e-15 | 14 |
carcinoma | 8.84e-12 | 106 |
cell type cancer | 2.75e-11 | 143 |
signet ring cell adenocarcinoma | 3.19e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.