FFCP PHASE1:Hg19::chr9:138591341..138591346,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002563!5.06e-34!4;CL:0002253!5.48e-18!2;CL:0002231!2.07e-12!3;CL:0002076!1.06e-07!43;CL:0002251!2.52e-07!21 | |ontology_enrichment_celltype=CL:0002563!5.06e-34!4;CL:0002253!5.48e-18!2;CL:0002231!2.07e-12!3;CL:0002076!1.06e-07!43;CL:0002251!2.52e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0002231;5.96e-34;3!CL:0002563;5.56e-26;4!CL:0002076;1.77e-12;42 | |ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0002231;5.96e-34;3!CL:0002563;5.56e-26;4!CL:0002076;1.77e-12;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0002231,5.96e-34,3;CL:0002563,5.56e-26,4;CL:0002076,1.07e-10,42;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0001046,5.37e-22,19;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0002367,2.37e-10,11;UBERON:0010147,2.37e-10,11;UBERON:0009846,2.37e-10,11;UBERON:0003353,2.37e-10,11;UBERON:0004902,2.37e-10,11;UBERON:0003820,2.37e-10,11;UBERON:0009847,2.37e-10,11;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0003929,1.34e-08,54;UBERON:0000162,2.00e-08,14;UBERON:0001353,2.00e-08,14;UBERON:0000163,2.00e-08,14;UBERON:0006866,2.00e-08,14;UBERON:0000164,2.00e-08,14;UBERON:0000931,2.00e-08,14;UBERON:0004122,5.93e-08,15;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p3@SOHLH1 | |short_description=p3@SOHLH1 | ||
}} | }} |
Revision as of 02:38, 21 November 2012
Short description: | p3@SOHLH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SOHLH1_5end |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | 27bp_to_ENST00000298466, ENST00000425225, NM_001012415, NM_001101677, uc004cgl.2, uc010nbe.2_5end |
EntrezGene: | SOHLH1 |
HGNC: | 27845 |
UniProt: | Q5JUK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.74e-50 | 2 |
epithelial cell of prostate | 5.96e-34 | 3 |
intestinal epithelial cell | 5.56e-26 | 4 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.56e-26 | 4 |
intestinal mucosa | 5.56e-26 | 4 |
wall of intestine | 5.56e-26 | 4 |
gastrointestinal system mucosa | 5.56e-26 | 4 |
gastrointestinal system epithelium | 5.56e-26 | 4 |
intestinal epithelium | 5.56e-26 | 4 |
hindgut | 5.37e-22 | 19 |
lower digestive tract | 4.21e-21 | 5 |
epithelium of mucosa | 9.39e-14 | 8 |
colon | 2.19e-12 | 9 |
simple columnar epithelium | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
prostate gland | 2.37e-10 | 11 |
male accessory sex gland | 2.37e-10 | 11 |
embryonic cloacal epithelium | 2.37e-10 | 11 |
epithelium of hindgut | 2.37e-10 | 11 |
urogenital sinus epithelium | 2.37e-10 | 11 |
prostate bud | 2.37e-10 | 11 |
prostate field | 2.37e-10 | 11 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
gut epithelium | 1.34e-08 | 54 |
cloaca | 2.00e-08 | 14 |
anal region | 2.00e-08 | 14 |
embryonic cloaca | 2.00e-08 | 14 |
terminal part of digestive tract | 2.00e-08 | 14 |
primitive urogenital sinus | 2.00e-08 | 14 |
proctodeum | 2.00e-08 | 14 |
genitourinary system | 5.93e-08 | 15 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.