FFCP PHASE1:Hg19::chr11:12217537..12217545,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!4.46e-38!25;CL:0000827!4.46e-38!25;CL:0000791!1.19e-36!18;CL:0000789!1.19e-36!18;CL:0002420!1.19e-36!18;CL:0002419!1.19e-36!18;CL:0000790!1.19e-36!18;CL:0000625!8.60e-32!11;CL:0000838!1.09e-22!52;CL:0000542!3.66e-22!53;CL:0000051!3.66e-22!53;CL:0000738!6.07e-14!140;CL:0002087!2.90e-12!119;CL:0000037!4.48e-10!172;CL:0000566!4.48e-10!172;CL:0000988!4.65e-10!182;CL:0000624!9.74e-10!6;CL:0002031!2.15e-09!124;CL:0002032!4.53e-08!165;CL:0000837!4.53e-08!165 | |ontology_enrichment_celltype=CL:0000084!4.46e-38!25;CL:0000827!4.46e-38!25;CL:0000791!1.19e-36!18;CL:0000789!1.19e-36!18;CL:0002420!1.19e-36!18;CL:0002419!1.19e-36!18;CL:0000790!1.19e-36!18;CL:0000625!8.60e-32!11;CL:0000838!1.09e-22!52;CL:0000542!3.66e-22!53;CL:0000051!3.66e-22!53;CL:0000738!6.07e-14!140;CL:0002087!2.90e-12!119;CL:0000037!4.48e-10!172;CL:0000566!4.48e-10!172;CL:0000988!4.65e-10!182;CL:0000624!9.74e-10!6;CL:0002031!2.15e-09!124;CL:0002032!4.53e-08!165;CL:0000837!4.53e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.25e-29;11!CL:0000084;7.25e-20;25!CL:0000791;6.33e-18;18!CL:0000789;6.33e-18;18!CL:0002419;6.33e-18;18!CL:0000542;2.65e-09;53!CL:0000623;6.56e-08;3 | |ontology_enrichment_celltype_v019=CL:0000625;5.25e-29;11!CL:0000084;7.25e-20;25!CL:0000791;6.33e-18;18!CL:0000789;6.33e-18;18!CL:0002419;6.33e-18;18!CL:0000542;2.65e-09;53!CL:0000623;6.56e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.66e-29,11;CL:0000084,5.61e-20,25;CL:0000827,5.61e-20,25;CL:0000791,5.08e-18,18;CL:0000789,5.08e-18,18;CL:0002420,5.08e-18,18;CL:0002419,5.08e-18,18;CL:0000790,5.08e-18,18;CL:0000838,1.18e-13,52;CL:0000542,2.14e-13,53;CL:0000051,2.14e-13,53;CL:0000623,7.76e-08,3;CL:0000825,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.33e-18;18!CL:0000051;2.65e-09;53 | |ontology_enrichment_development_v019=CL:0000790;6.33e-18;18!CL:0000051;2.65e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.66e-21;1!DOID:0060061;4.66e-21;1!DOID:8691;4.66e-21;1 | |ontology_enrichment_disease_v019=DOID:0060060;4.66e-21;1!DOID:0060061;4.66e-21;1!DOID:8691;4.66e-21;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.45e-21,1;DOID:0060061,3.45e-21,1;DOID:8691,3.45e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.91e-13!7;UBERON:0002370!3.11e-09!4;UBERON:0005058!3.11e-09!4;UBERON:0009113!3.11e-09!4;UBERON:0003295!3.11e-09!4;UBERON:0005562!3.11e-09!4 | |ontology_enrichment_uberon=UBERON:0004177!6.91e-13!7;UBERON:0002370!3.11e-09!4;UBERON:0005058!3.11e-09!4;UBERON:0009113!3.11e-09!4;UBERON:0003295!3.11e-09!4;UBERON:0005562!3.11e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.98e-41;2!UBERON:0005058;3.98e-41;2!UBERON:0009113;3.98e-41;2!UBERON:0004177;3.95e-17;5!UBERON:0005057;3.95e-17;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.98e-41;2!UBERON:0005058;3.98e-41;2!UBERON:0009113;3.98e-41;2!UBERON:0004177;3.95e-17;5!UBERON:0005057;3.95e-17;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.82e-21,4;UBERON:0005058,3.82e-21,4;UBERON:0009113,3.82e-21,4;UBERON:0003295,3.82e-21,4;UBERON:0005562,3.82e-21,4;UBERON:0003351,1.90e-14,6;UBERON:0004177,1.59e-12,7;UBERON:0005057,1.59e-12,7;UBERON:0000974,4.75e-09,10;UBERON:0003408,4.75e-09,10;UBERON:0001042,4.75e-09,10;UBERON:0009145,4.75e-09,10;UBERON:0006562,2.62e-08,11;UBERON:0009722,2.62e-08,11;UBERON:0007690,2.62e-08,11 | |||
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| ||
|short_description=p26@MICAL2 | |short_description=p26@MICAL2 | ||
}} | }} |
Revision as of 20:06, 20 November 2012
Short description: | p26@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_26_at_MICAL2_5end |
Coexpression cluster: | C1618_mycosis_CD4_thymus_CD8_Natural_chronic_Basophils |
Association with transcript: | 45bp_to_ENST00000527195, ENST00000532166_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.66e-29 | 11 |
T cell | 5.61e-20 | 25 |
pro-T cell | 5.61e-20 | 25 |
mature alpha-beta T cell | 5.08e-18 | 18 |
alpha-beta T cell | 5.08e-18 | 18 |
immature T cell | 5.08e-18 | 18 |
mature T cell | 5.08e-18 | 18 |
immature alpha-beta T cell | 5.08e-18 | 18 |
lymphoid lineage restricted progenitor cell | 1.18e-13 | 52 |
lymphocyte | 2.14e-13 | 53 |
common lymphoid progenitor | 2.14e-13 | 53 |
natural killer cell | 7.76e-08 | 3 |
pro-NK cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.82e-21 | 4 |
hemolymphoid system gland | 3.82e-21 | 4 |
thymic region | 3.82e-21 | 4 |
pharyngeal gland | 3.82e-21 | 4 |
thymus primordium | 3.82e-21 | 4 |
pharyngeal epithelium | 1.90e-14 | 6 |
hemopoietic organ | 1.59e-12 | 7 |
immune organ | 1.59e-12 | 7 |
neck | 4.75e-09 | 10 |
gland of gut | 4.75e-09 | 10 |
chordate pharynx | 4.75e-09 | 10 |
pharyngeal region of foregut | 4.75e-09 | 10 |
pharynx | 2.62e-08 | 11 |
entire pharyngeal arch endoderm | 2.62e-08 | 11 |
early pharyngeal endoderm | 2.62e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.45e-21 | 1 |
cutaneous T cell lymphoma | 3.45e-21 | 1 |
mycosis fungoides | 3.45e-21 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.