FFCP PHASE1:Hg19::chr9:137591763..137591784,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!9.51e-32!180;CL:0000057!2.33e-25!75;CL:0002334!1.53e-09!12;CL:0000680!3.07e-09!57;CL:0000056!3.07e-09!57;CL:0000355!3.07e-09!57;CL:0000192!9.96e-09!42;CL:0000514!9.96e-09!42;CL:0002620!1.71e-08!23;CL:0000187!2.08e-08!54;CL:0000048!3.95e-08!430;CL:0000183!4.10e-08!59;CL:0002371!1.78e-07!591;CL:0000034!1.92e-07!444;CL:0000723!2.04e-07!436;CL:0000144!2.38e-07!625 | |ontology_enrichment_celltype=CL:0000055!9.51e-32!180;CL:0000057!2.33e-25!75;CL:0002334!1.53e-09!12;CL:0000680!3.07e-09!57;CL:0000056!3.07e-09!57;CL:0000355!3.07e-09!57;CL:0000192!9.96e-09!42;CL:0000514!9.96e-09!42;CL:0002620!1.71e-08!23;CL:0000187!2.08e-08!54;CL:0000048!3.95e-08!430;CL:0000183!4.10e-08!59;CL:0002371!1.78e-07!591;CL:0000034!1.92e-07!444;CL:0000723!2.04e-07!436;CL:0000144!2.38e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.50e-14;12!CL:0000349;1.56e-12;19!CL:0000134;6.96e-10;55!CL:0000057;1.14e-09;73!CL:0002620;1.33e-09;23!CL:0000048;8.34e-08;58!CL:0000723;2.51e-07;61!CL:0002580;5.65e-07;3!CL:0002320;8.28e-07;188 | |ontology_enrichment_celltype_v019=CL:0002334;9.50e-14;12!CL:0000349;1.56e-12;19!CL:0000134;6.96e-10;55!CL:0000057;1.14e-09;73!CL:0002620;1.33e-09;23!CL:0000048;8.34e-08;58!CL:0000723;2.51e-07;61!CL:0002580;5.65e-07;3!CL:0002320;8.28e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.34e-27,76;CL:0002334,1.10e-13,12;CL:0000349,1.45e-12,19;CL:0000134,3.60e-12,354;CL:0002320,4.02e-12,361;CL:0000048,5.76e-11,427;CL:0000723,1.68e-10,433;CL:0000034,6.68e-10,441;CL:0002620,6.87e-10,23;CL:0000219,7.54e-10,386;CL:0002580,5.94e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.37e-09;14!DOID:17;3.18e-08;5!DOID:450;3.18e-08;5!DOID:66;3.18e-08;5!DOID:423;3.18e-08;5!DOID:0080000;3.18e-08;5!DOID:11722;3.18e-08;5 | |ontology_enrichment_disease_v019=DOID:2394;1.37e-09;14!DOID:17;3.18e-08;5!DOID:450;3.18e-08;5!DOID:66;3.18e-08;5!DOID:423;3.18e-08;5!DOID:0080000;3.18e-08;5!DOID:11722;3.18e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.28e-09,14;DOID:17,1.43e-08,5;DOID:450,1.43e-08,5;DOID:66,1.43e-08,5;DOID:423,1.43e-08,5;DOID:0080000,1.43e-08,5;DOID:11722,1.43e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!5.48e-11!63;UBERON:0001015!5.48e-11!63;UBERON:0000383!5.48e-11!63;UBERON:0001134!1.11e-10!61;UBERON:0002036!1.11e-10!61;UBERON:0003082!1.11e-10!61;UBERON:0004290!1.36e-09!70;UBERON:0000914!1.39e-09!83;UBERON:0002329!1.39e-09!83;UBERON:0003077!1.39e-09!83;UBERON:0003059!1.39e-09!83;UBERON:0007282!1.39e-09!83;UBERON:0009618!1.39e-09!83;UBERON:0007285!1.39e-09!83;UBERON:0004872!5.58e-09!84;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0000478!2.75e-07!24;UBERON:0000486!3.62e-07!82;UBERON:0001637!4.82e-07!42;UBERON:0003509!4.82e-07!42;UBERON:0004572!4.82e-07!42;UBERON:0005256!9.61e-07!143 | |ontology_enrichment_uberon=UBERON:0002385!5.48e-11!63;UBERON:0001015!5.48e-11!63;UBERON:0000383!5.48e-11!63;UBERON:0001134!1.11e-10!61;UBERON:0002036!1.11e-10!61;UBERON:0003082!1.11e-10!61;UBERON:0004290!1.36e-09!70;UBERON:0000914!1.39e-09!83;UBERON:0002329!1.39e-09!83;UBERON:0003077!1.39e-09!83;UBERON:0003059!1.39e-09!83;UBERON:0007282!1.39e-09!83;UBERON:0009618!1.39e-09!83;UBERON:0007285!1.39e-09!83;UBERON:0004872!5.58e-09!84;UBERON:0002049!1.21e-07!79;UBERON:0007798!1.21e-07!79;UBERON:0000478!2.75e-07!24;UBERON:0000486!3.62e-07!82;UBERON:0001637!4.82e-07!42;UBERON:0003509!4.82e-07!42;UBERON:0004572!4.82e-07!42;UBERON:0005256!9.61e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.12e-11;24!UBERON:0003688;1.31e-10;6!UBERON:0002358;1.31e-10;6!UBERON:0003684;1.31e-10;6!UBERON:0001178;1.31e-10;6!UBERON:0005631;9.42e-10;10!UBERON:0000158;9.42e-10;10!UBERON:0002384;3.65e-07;198!UBERON:0004457;9.49e-07;9!UBERON:0000042;9.49e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000478;5.12e-11;24!UBERON:0003688;1.31e-10;6!UBERON:0002358;1.31e-10;6!UBERON:0003684;1.31e-10;6!UBERON:0001178;1.31e-10;6!UBERON:0005631;9.42e-10;10!UBERON:0000158;9.42e-10;10!UBERON:0002384;3.65e-07;198!UBERON:0004457;9.49e-07;9!UBERON:0000042;9.49e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.63e-13,371;UBERON:0000478,4.72e-11,24;UBERON:0003688,1.12e-10,6;UBERON:0002358,1.12e-10,6;UBERON:0003684,1.12e-10,6;UBERON:0001178,1.12e-10,6;UBERON:0005631,1.71e-08,14;UBERON:0000158,1.71e-08,14;UBERON:0002199,1.98e-07,46;UBERON:0002416,1.98e-07,46;UBERON:0004923,9.71e-07,66 | |||
|phase1_expression=1.81678379270557,3.8538094300377,1.83240725324762,2.00146596706261,2.68176656656373,0.872338524100369,2.53299878168311,0.631719873426831,0,0,0,1.52908960491121,2.37390280405608,0,0,2.01697543935533,0,0,0.487932798790507,0.246242116153576,0.816002764977012,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,2.00535164254356,1.30361867064741,0.795285947051099,10.705967146658,0.0945348171640679,1.33037638477538,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,2.43042584364528,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,7.45457927542978,1.01304409331664,0.397227542439656,10.0392817262085,1.77334191099179,0.560677600142307,1.06748995729705,4.68668341992604,0.933633106199299,0.808264032418128,1.14423332179421,2.8757911252537,1.72852777344,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,1.48360157567134,0.910161361938026,2.87447256726495,0.168336113954066,0.375355559615893,0,1.31693286264251,1.83892677479412,1.65261864797256,0.453728732640084,2.33206526395521,1.92201649936711,1.90738711043606,3.90118424909723,1.23663035086127,3.34932702059318,0.558350568994769,2.70042131586026,3.80004320128675,1.7670364197088,1.10459878370759,2.42469085228218,5.68015348026583,1.81353776809752,0.339121184620975,0,0,0,0,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,0,0,1.92972281457866,0,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0,0.237270619111097,0.539325232640658,0,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.07333828582095,1.55126058909333,0,0.845302752556,0.797814349754612,0,0,0,0,1.14382394926518,9.22456729165453,3.29296134712308,0,1.06617584622764,0.791951872933429,0.301439377059586,1.74306691720059,0.799783929456456,0,0,0,1.19812427745791,0,0,0.723906533337896,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,3.53550464602372,7.31558854068363,2.83864347061082,1.63997980989798,0.601892199455438,0,0,1.99267679560631,0.553107505625109,0.173767228936166,0.783204629850962,2.05886054286514,0,0,0,0.606255142892519,0,3.32629322662648,4.21783273291921,4.45039722535381,10.1037633995906,4.48487022394953,2.04682899626681,3.69964018630297,2.96836132889982,0.925258162815933,2.13074070375753,0.410635780069046,1.55776328755086,1.16210378459959,0,0.40101294060657,0,1.03333003348146,0.728364672026868,0.786746489756545,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.28197250745681,0.330037999682352,0,0.650060246036521,0,0,0,0.460511024178389,0,0.429680979473094,1.45016693914229,0.170453254832202,0.445160178233687,0.165284915360978,0.384380134730212,0.765676274967505,0.4046311234222,0.464845549297286,6.61105928344344,0.6970372701606,0.924100740528266,0.532306030317022,0,0.37064843820784,0.715624433709956,0,0.949138274156178,0.762520775695299,0.255897791311334,0.855877976067841,0.318203247925937,0.78494864019923,0.179872457583315,3.0199073270966,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0.136499911407986,5.23200098228737,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.608731130888112,0.30982349809975,0.845086807596724,0.143411352204052,0.785992328104969,0.7133421029625,0.354761064070598,0.844430541190656,0.658589785919804,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,1.48482340416319,3.07160702099232,0,0,0,0,0.211125408127993,0.398495976502139,0,0,0.409074730008619,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0.683652335082007,0.23056390438806,0,0,1.91400695839152,1.19076871422421,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0.19351266257817,0.219267951258557,0,0,0,0,0.137041924646751,0,0,0,0,0.426905989478705,3.39676336289621,0,0,0,0,0,0,0.271808412147228,0.732219924186332,0.713987523454252,0,0,0,0,3.0083580899397,0,0.558564802544508,0.458320848023367,0,0,0,0,0.201550417460179,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,1.36310417428337,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| ||
|short_description=p@chr9:137591763..137591784,+ | |short_description=p@chr9:137591763..137591784,+ | ||
}} | }} |
Revision as of 07:05, 20 November 2012
Short description: | p@chr9:137591763..137591784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:137591763..137591784, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.34e-27 | 76 |
preadipocyte | 1.10e-13 | 12 |
extraembryonic cell | 1.45e-12 | 19 |
mesenchymal cell | 3.60e-12 | 354 |
connective tissue cell | 4.02e-12 | 361 |
multi fate stem cell | 5.76e-11 | 427 |
somatic stem cell | 1.68e-10 | 433 |
stem cell | 6.68e-10 | 441 |
skin fibroblast | 6.87e-10 | 23 |
motile cell | 7.54e-10 | 386 |
preadipocyte of the breast | 5.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.63e-13 | 371 |
extraembryonic structure | 4.72e-11 | 24 |
omentum | 1.12e-10 | 6 |
peritoneum | 1.12e-10 | 6 |
abdominal cavity | 1.12e-10 | 6 |
visceral peritoneum | 1.12e-10 | 6 |
extraembryonic membrane | 1.71e-08 | 14 |
membranous layer | 1.71e-08 | 14 |
integument | 1.98e-07 | 46 |
integumental system | 1.98e-07 | 46 |
organ component layer | 9.71e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.28e-09 | 14 |
musculoskeletal system disease | 1.43e-08 | 5 |
myotonic disease | 1.43e-08 | 5 |
muscle tissue disease | 1.43e-08 | 5 |
myopathy | 1.43e-08 | 5 |
muscular disease | 1.43e-08 | 5 |
myotonic dystrophy | 1.43e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.