FFCP PHASE1:Hg19::chr6:30848638..30848645,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!6.65e-13!25;CL:0000128!1.12e-11!7;CL:0000126!1.12e-11!7;CL:0000127!1.12e-11!7;CL:0002453!1.12e-11!7;CL:0000047!8.16e-11!8;CL:0002605!9.04e-11!3;CL:0000133!5.30e-10!59;CL:0000540!1.73e-09!6;CL:0000031!1.73e-09!6;CL:0000404!1.73e-09!6;CL:0000221!9.30e-08!71 | |ontology_enrichment_celltype=CL:0002319!6.65e-13!25;CL:0000128!1.12e-11!7;CL:0000126!1.12e-11!7;CL:0000127!1.12e-11!7;CL:0002453!1.12e-11!7;CL:0000047!8.16e-11!8;CL:0002605!9.04e-11!3;CL:0000133!5.30e-10!59;CL:0000540!1.73e-09!6;CL:0000031!1.73e-09!6;CL:0000404!1.73e-09!6;CL:0000221!9.30e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.05e-25;6!CL:0000404;2.05e-25;6!CL:0002319;3.61e-10;25!CL:0000047;1.03e-09;2 | |ontology_enrichment_celltype_v019=CL:0000540;2.05e-25;6!CL:0000404;2.05e-25;6!CL:0002319;3.61e-10;25!CL:0000047;1.03e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.87e-33,8;CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0002319,3.48e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.05e-25;6!UBERON:0006241;9.11e-07;3!UBERON:0003057;9.11e-07;3 | |ontology_enrichment_development_v019=CL:0000031;2.05e-25;6!UBERON:0006241;9.11e-07;3!UBERON:0003057;9.11e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-79!82;UBERON:0001049!5.00e-76!57;UBERON:0005068!5.00e-76!57;UBERON:0006241!5.00e-76!57;UBERON:0007135!5.00e-76!57;UBERON:0005743!1.47e-75!86;UBERON:0000073!1.69e-70!94;UBERON:0001016!1.69e-70!94;UBERON:0002616!7.32e-65!59;UBERON:0000955!1.13e-63!69;UBERON:0006238!1.13e-63!69;UBERON:0003075!4.28e-62!86;UBERON:0007284!4.28e-62!86;UBERON:0001893!3.63e-60!34;UBERON:0002346!6.94e-59!90;UBERON:0002791!1.19e-57!33;UBERON:0002780!3.16e-57!41;UBERON:0001890!3.16e-57!41;UBERON:0006240!3.16e-57!41;UBERON:0002020!5.50e-56!34;UBERON:0003528!5.50e-56!34;UBERON:0003080!1.03e-55!42;UBERON:0001869!1.32e-54!32;UBERON:0003056!3.17e-48!61;UBERON:0000956!6.33e-45!25;UBERON:0000203!6.33e-45!25;UBERON:0004121!5.05e-44!169;UBERON:0000924!9.60e-43!173;UBERON:0006601!9.60e-43!173;UBERON:0000033!6.37e-42!123;UBERON:0000153!1.70e-39!129;UBERON:0007811!1.70e-39!129;UBERON:0002619!2.13e-36!22;UBERON:0001950!7.32e-31!20;UBERON:0007023!3.10e-25!115;UBERON:0003076!2.01e-20!15;UBERON:0003057!2.01e-20!15;UBERON:0000025!8.91e-17!194;UBERON:0004733!2.13e-16!12;UBERON:0002028!2.13e-16!12;UBERON:0007277!2.13e-16!12;UBERON:0004732!5.00e-15!13;UBERON:0002298!1.19e-14!8;UBERON:0001871!4.96e-14!7;UBERON:0000200!1.04e-12!6;UBERON:0002308!1.85e-12!9;UBERON:0000125!1.85e-12!9;UBERON:0002420!2.47e-12!9;UBERON:0007245!2.47e-12!9;UBERON:0010009!2.47e-12!9;UBERON:0010011!2.47e-12!9;UBERON:0000454!2.47e-12!9;UBERON:0000064!8.52e-12!219;UBERON:0004111!1.19e-11!241;UBERON:0009663!1.85e-11!7;UBERON:0000483!2.68e-11!309;UBERON:0000477!2.88e-11!286;UBERON:0000119!4.35e-11!312;UBERON:0001896!6.07e-11!3;UBERON:0005290!6.07e-11!3;UBERON:0010096!6.07e-11!3;UBERON:0002021!8.62e-11!5;UBERON:0000349!2.05e-10!5;UBERON:0002771!5.03e-10!3;UBERON:0000475!2.94e-09!365;UBERON:0002680!8.42e-09!9;UBERON:0001895!8.42e-09!9;UBERON:0010092!8.42e-09!9;UBERON:0000369!6.23e-08!4;UBERON:0002435!6.23e-08!4;UBERON:0000204!6.23e-08!4;UBERON:0010082!6.23e-08!4;UBERON:0001873!7.77e-08!2;UBERON:0010122!7.77e-08!2;UBERON:0001954!1.02e-07!2;UBERON:0003022!1.02e-07!2;UBERON:0002421!1.02e-07!2;UBERON:0002600!1.02e-07!2;UBERON:0000488!1.57e-07!4;UBERON:0000922!4.10e-07!612 | |ontology_enrichment_uberon=UBERON:0001017!1.05e-79!82;UBERON:0001049!5.00e-76!57;UBERON:0005068!5.00e-76!57;UBERON:0006241!5.00e-76!57;UBERON:0007135!5.00e-76!57;UBERON:0005743!1.47e-75!86;UBERON:0000073!1.69e-70!94;UBERON:0001016!1.69e-70!94;UBERON:0002616!7.32e-65!59;UBERON:0000955!1.13e-63!69;UBERON:0006238!1.13e-63!69;UBERON:0003075!4.28e-62!86;UBERON:0007284!4.28e-62!86;UBERON:0001893!3.63e-60!34;UBERON:0002346!6.94e-59!90;UBERON:0002791!1.19e-57!33;UBERON:0002780!3.16e-57!41;UBERON:0001890!3.16e-57!41;UBERON:0006240!3.16e-57!41;UBERON:0002020!5.50e-56!34;UBERON:0003528!5.50e-56!34;UBERON:0003080!1.03e-55!42;UBERON:0001869!1.32e-54!32;UBERON:0003056!3.17e-48!61;UBERON:0000956!6.33e-45!25;UBERON:0000203!6.33e-45!25;UBERON:0004121!5.05e-44!169;UBERON:0000924!9.60e-43!173;UBERON:0006601!9.60e-43!173;UBERON:0000033!6.37e-42!123;UBERON:0000153!1.70e-39!129;UBERON:0007811!1.70e-39!129;UBERON:0002619!2.13e-36!22;UBERON:0001950!7.32e-31!20;UBERON:0007023!3.10e-25!115;UBERON:0003076!2.01e-20!15;UBERON:0003057!2.01e-20!15;UBERON:0000025!8.91e-17!194;UBERON:0004733!2.13e-16!12;UBERON:0002028!2.13e-16!12;UBERON:0007277!2.13e-16!12;UBERON:0004732!5.00e-15!13;UBERON:0002298!1.19e-14!8;UBERON:0001871!4.96e-14!7;UBERON:0000200!1.04e-12!6;UBERON:0002308!1.85e-12!9;UBERON:0000125!1.85e-12!9;UBERON:0002420!2.47e-12!9;UBERON:0007245!2.47e-12!9;UBERON:0010009!2.47e-12!9;UBERON:0010011!2.47e-12!9;UBERON:0000454!2.47e-12!9;UBERON:0000064!8.52e-12!219;UBERON:0004111!1.19e-11!241;UBERON:0009663!1.85e-11!7;UBERON:0000483!2.68e-11!309;UBERON:0000477!2.88e-11!286;UBERON:0000119!4.35e-11!312;UBERON:0001896!6.07e-11!3;UBERON:0005290!6.07e-11!3;UBERON:0010096!6.07e-11!3;UBERON:0002021!8.62e-11!5;UBERON:0000349!2.05e-10!5;UBERON:0002771!5.03e-10!3;UBERON:0000475!2.94e-09!365;UBERON:0002680!8.42e-09!9;UBERON:0001895!8.42e-09!9;UBERON:0010092!8.42e-09!9;UBERON:0000369!6.23e-08!4;UBERON:0002435!6.23e-08!4;UBERON:0000204!6.23e-08!4;UBERON:0010082!6.23e-08!4;UBERON:0001873!7.77e-08!2;UBERON:0010122!7.77e-08!2;UBERON:0001954!1.02e-07!2;UBERON:0003022!1.02e-07!2;UBERON:0002421!1.02e-07!2;UBERON:0002600!1.02e-07!2;UBERON:0000488!1.57e-07!4;UBERON:0000922!4.10e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.00e-10;49!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0001950;9.18e-08;20!UBERON:0001016;3.61e-07;83!UBERON:0002619;3.91e-07;22!UBERON:0002114;6.88e-07;2!UBERON:0001017;8.12e-07;75!UBERON:0002240;9.11e-07;3!UBERON:0005174;9.11e-07;3!UBERON:0001137;9.11e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000922;2.00e-10;49!UBERON:0001905;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0001950;9.18e-08;20!UBERON:0001016;3.61e-07;83!UBERON:0002619;3.91e-07;22!UBERON:0002114;6.88e-07;2!UBERON:0001017;8.12e-07;75!UBERON:0002240;9.11e-07;3!UBERON:0005174;9.11e-07;3!UBERON:0001137;9.11e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-19,81;UBERON:0001016,3.26e-17,89;UBERON:0004121,1.24e-10,171;UBERON:0000924,1.24e-10,171;UBERON:0006601,1.24e-10,171;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0011216,6.04e-08,223;UBERON:0001950,9.08e-08,20;UBERON:0001049,2.74e-07,56;UBERON:0005068,2.74e-07,56;UBERON:0006241,2.74e-07,56;UBERON:0007135,2.74e-07,56;UBERON:0002619,3.87e-07,22;UBERON:0003075,6.02e-07,82;UBERON:0007284,6.02e-07,82;UBERON:0002114,6.88e-07,2;UBERON:0002240,9.12e-07,3;UBERON:0005174,9.12e-07,3;UBERON:0001137,9.12e-07,3 | |||
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| ||
|short_description=p44@DDR1 | |short_description=p44@DDR1 | ||
}} | }} |
Revision as of 21:37, 19 November 2012
Short description: | p44@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_44_at_DDR1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 12bp_to_ENST00000324771_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | Q08345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.87e-33 | 8 |
neuron | 1.67e-25 | 6 |
neuroblast | 1.67e-25 | 6 |
electrically signaling cell | 1.67e-25 | 6 |
neural cell | 3.48e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.70e-19 | 81 |
nervous system | 3.26e-17 | 89 |
ectoderm-derived structure | 1.24e-10 | 171 |
ectoderm | 1.24e-10 | 171 |
presumptive ectoderm | 1.24e-10 | 171 |
pineal body | 2.02e-09 | 2 |
regional part of epithalamus | 2.02e-09 | 2 |
secretory circumventricular organ | 2.02e-09 | 2 |
circumventricular organ | 2.02e-09 | 2 |
epithalamus | 2.02e-09 | 2 |
organ system subdivision | 6.04e-08 | 223 |
neocortex | 9.08e-08 | 20 |
neural tube | 2.74e-07 | 56 |
neural rod | 2.74e-07 | 56 |
future spinal cord | 2.74e-07 | 56 |
neural keel | 2.74e-07 | 56 |
regional part of cerebral cortex | 3.87e-07 | 22 |
neural plate | 6.02e-07 | 82 |
presumptive neural plate | 6.02e-07 | 82 |
duodenum | 6.88e-07 | 2 |
spinal cord | 9.12e-07 | 3 |
dorsal region element | 9.12e-07 | 3 |
dorsum | 9.12e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.