FFCP PHASE1:Hg19::chr1:32264250..32264354,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.14e-41!180;CL:0000222!2.39e-30!119;CL:0000220!3.76e-25!246;CL:0002321!1.44e-24!248;CL:0000680!1.34e-22!57;CL:0000056!1.34e-22!57;CL:0000355!1.34e-22!57;CL:0000183!1.99e-22!59;CL:0002371!2.23e-22!591;CL:0000144!6.87e-22!625;CL:0000187!1.16e-21!54;CL:0000192!5.51e-21!42;CL:0000514!5.51e-21!42;CL:0000393!1.09e-18!60;CL:0000211!1.09e-18!60;CL:0000359!1.70e-18!32;CL:0000057!2.18e-17!75;CL:0000548!3.96e-17!679;CL:0000004!3.96e-17!679;CL:0000255!3.96e-17!679;CL:0000012!5.04e-17!682;CL:0000003!1.09e-13!722;CL:0002139!1.86e-10!24;CL:0000115!1.49e-09!35;CL:0000071!2.86e-09!18;CL:0002546!2.86e-09!18;CL:0000213!6.19e-09!57;CL:0000215!6.19e-09!57;CL:0002620!1.06e-08!23;CL:0002078!1.65e-08!44;CL:0002539!1.06e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.14e-41!180;CL:0000222!2.39e-30!119;CL:0000220!3.76e-25!246;CL:0002321!1.44e-24!248;CL:0000680!1.34e-22!57;CL:0000056!1.34e-22!57;CL:0000355!1.34e-22!57;CL:0000183!1.99e-22!59;CL:0002371!2.23e-22!591;CL:0000144!6.87e-22!625;CL:0000187!1.16e-21!54;CL:0000192!5.51e-21!42;CL:0000514!5.51e-21!42;CL:0000393!1.09e-18!60;CL:0000211!1.09e-18!60;CL:0000359!1.70e-18!32;CL:0000057!2.18e-17!75;CL:0000548!3.96e-17!679;CL:0000004!3.96e-17!679;CL:0000255!3.96e-17!679;CL:0000012!5.04e-17!682;CL:0000003!1.09e-13!722;CL:0002139!1.86e-10!24;CL:0000115!1.49e-09!35;CL:0000071!2.86e-09!18;CL:0002546!2.86e-09!18;CL:0000213!6.19e-09!57;CL:0000215!6.19e-09!57;CL:0002620!1.06e-08!23;CL:0002078!1.65e-08!44;CL:0002539!1.06e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.51e-19;32!CL:0000192;2.70e-16;43!CL:0000187;9.64e-13;55!CL:0002139;2.78e-11;24!CL:0000393;5.31e-10;61!CL:0000211;5.31e-10;61!CL:0000071;5.74e-10;18!CL:0000115;1.99e-09;36!CL:0002620;2.01e-09;23!CL:0000057;1.44e-08;73!CL:0002539;3.12e-08;10!CL:0000134;4.20e-07;55!CL:0000048;6.89e-07;58!CL:0000723;8.37e-07;61 | |ontology_enrichment_celltype_v019=CL:0000359;8.51e-19;32!CL:0000192;2.70e-16;43!CL:0000187;9.64e-13;55!CL:0002139;2.78e-11;24!CL:0000393;5.31e-10;61!CL:0000211;5.31e-10;61!CL:0000071;5.74e-10;18!CL:0000115;1.99e-09;36!CL:0002620;2.01e-09;23!CL:0000057;1.44e-08;73!CL:0002539;3.12e-08;10!CL:0000134;4.20e-07;55!CL:0000048;6.89e-07;58!CL:0000723;8.37e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.24e-32,121;CL:0000680,2.14e-24,58;CL:0000056,2.14e-24,58;CL:0000355,2.14e-24,58;CL:0002321,2.21e-24,250;CL:0000187,2.23e-23,55;CL:0000192,1.38e-22,43;CL:0000514,1.38e-22,43;CL:0000393,4.52e-20,61;CL:0000211,4.52e-20,61;CL:0000359,6.17e-20,32;CL:0000057,2.40e-19,76;CL:0002139,3.27e-11,24;CL:0000115,5.34e-11,36;CL:0000071,6.32e-10,18;CL:0002546,6.32e-10,18;CL:0000048,1.04e-09,427;CL:0002620,1.97e-09,23;CL:0000213,2.10e-09,58;CL:0000215,2.10e-09,58;CL:0000723,2.67e-09,433;CL:0002078,4.93e-09,45;CL:0000034,1.37e-08,441;CL:0002539,3.18e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.70e-16;43!CL:0000355;6.88e-13;58!CL:0002546;5.74e-10;18!CL:0000222;9.77e-09;121 | |ontology_enrichment_development_v019=CL:0000514;2.70e-16;43!CL:0000355;6.88e-13;58!CL:0002546;5.74e-10;18!CL:0000222;9.77e-09;121 | ||
|ontology_enrichment_disease=DOID:2394!1.36e-07!14 | |ontology_enrichment_disease=DOID:2394!1.36e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.00e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;3.00e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.98e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.57e-28!79;UBERON:0007798!2.57e-28!79;UBERON:0004535!3.15e-27!110;UBERON:0000055!5.22e-26!69;UBERON:0001009!1.57e-25!113;UBERON:0001981!2.13e-24!60;UBERON:0007500!2.13e-24!60;UBERON:0004537!2.13e-24!60;UBERON:0006965!2.13e-24!60;UBERON:0001637!4.17e-24!42;UBERON:0003509!4.17e-24!42;UBERON:0004572!4.17e-24!42;UBERON:0000914!2.49e-23!83;UBERON:0002329!2.49e-23!83;UBERON:0003077!2.49e-23!83;UBERON:0003059!2.49e-23!83;UBERON:0007282!2.49e-23!83;UBERON:0009618!2.49e-23!83;UBERON:0007285!2.49e-23!83;UBERON:0004872!1.53e-22!84;UBERON:0004290!7.06e-22!70;UBERON:0000486!1.03e-21!82;UBERON:0003914!2.10e-20!118;UBERON:0000490!1.66e-19!138;UBERON:0005256!2.08e-19!143;UBERON:0001134!4.97e-19!61;UBERON:0002036!4.97e-19!61;UBERON:0003082!4.97e-19!61;UBERON:0004573!8.08e-19!33;UBERON:0004571!8.08e-19!33;UBERON:0002385!2.03e-18!63;UBERON:0001015!2.03e-18!63;UBERON:0000383!2.03e-18!63;UBERON:0002100!1.41e-13!216;UBERON:0000119!6.15e-13!312;UBERON:0000483!2.41e-12!309;UBERON:0000475!7.83e-12!365;UBERON:0000947!3.76e-11!21;UBERON:0010191!3.76e-11!21;UBERON:0000487!4.48e-10!22;UBERON:0001986!2.86e-09!18;UBERON:0004638!2.86e-09!18;UBERON:0004852!2.86e-09!18;UBERON:0000467!4.07e-09!625;UBERON:0006914!5.55e-09!25;UBERON:0000480!6.27e-09!626;UBERON:0000468!1.30e-08!659;UBERON:0003102!2.12e-08!95;UBERON:0004111!8.79e-08!241;UBERON:0004237!1.06e-07!10;UBERON:0004695!1.06e-07!10;UBERON:0002111!1.06e-07!10;UBERON:0004178!1.06e-07!10;UBERON:0002199!2.09e-07!45;UBERON:0002416!2.09e-07!45;UBERON:0000477!2.89e-07!286;UBERON:0003104!4.94e-07!238;UBERON:0009142!4.94e-07!238;UBERON:0000926!7.70e-07!448;UBERON:0004120!7.70e-07!448;UBERON:0006603!7.70e-07!448;UBERON:0001135!8.49e-07!15 | |ontology_enrichment_uberon=UBERON:0002049!2.57e-28!79;UBERON:0007798!2.57e-28!79;UBERON:0004535!3.15e-27!110;UBERON:0000055!5.22e-26!69;UBERON:0001009!1.57e-25!113;UBERON:0001981!2.13e-24!60;UBERON:0007500!2.13e-24!60;UBERON:0004537!2.13e-24!60;UBERON:0006965!2.13e-24!60;UBERON:0001637!4.17e-24!42;UBERON:0003509!4.17e-24!42;UBERON:0004572!4.17e-24!42;UBERON:0000914!2.49e-23!83;UBERON:0002329!2.49e-23!83;UBERON:0003077!2.49e-23!83;UBERON:0003059!2.49e-23!83;UBERON:0007282!2.49e-23!83;UBERON:0009618!2.49e-23!83;UBERON:0007285!2.49e-23!83;UBERON:0004872!1.53e-22!84;UBERON:0004290!7.06e-22!70;UBERON:0000486!1.03e-21!82;UBERON:0003914!2.10e-20!118;UBERON:0000490!1.66e-19!138;UBERON:0005256!2.08e-19!143;UBERON:0001134!4.97e-19!61;UBERON:0002036!4.97e-19!61;UBERON:0003082!4.97e-19!61;UBERON:0004573!8.08e-19!33;UBERON:0004571!8.08e-19!33;UBERON:0002385!2.03e-18!63;UBERON:0001015!2.03e-18!63;UBERON:0000383!2.03e-18!63;UBERON:0002100!1.41e-13!216;UBERON:0000119!6.15e-13!312;UBERON:0000483!2.41e-12!309;UBERON:0000475!7.83e-12!365;UBERON:0000947!3.76e-11!21;UBERON:0010191!3.76e-11!21;UBERON:0000487!4.48e-10!22;UBERON:0001986!2.86e-09!18;UBERON:0004638!2.86e-09!18;UBERON:0004852!2.86e-09!18;UBERON:0000467!4.07e-09!625;UBERON:0006914!5.55e-09!25;UBERON:0000480!6.27e-09!626;UBERON:0000468!1.30e-08!659;UBERON:0003102!2.12e-08!95;UBERON:0004111!8.79e-08!241;UBERON:0004237!1.06e-07!10;UBERON:0004695!1.06e-07!10;UBERON:0002111!1.06e-07!10;UBERON:0004178!1.06e-07!10;UBERON:0002199!2.09e-07!45;UBERON:0002416!2.09e-07!45;UBERON:0000477!2.89e-07!286;UBERON:0003104!4.94e-07!238;UBERON:0009142!4.94e-07!238;UBERON:0000926!7.70e-07!448;UBERON:0004120!7.70e-07!448;UBERON:0006603!7.70e-07!448;UBERON:0001135!8.49e-07!15 | ||
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| ||
|short_description=p1@SPOCD1 | |short_description=p1@SPOCD1 | ||
}} | }} |
Revision as of 21:00, 19 November 2012
Short description: | p1@SPOCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SPOCD1_5end |
Coexpression cluster: | C3970_Smooth_Fibroblast_basal_Mesothelial_mesenchymal_leiomyoma_Aortic |
Association with transcript: | 0bp_to_ENST00000294514, ENST00000528579, uc001btt.2_5end |
EntrezGene: | SPOCD1 |
HGNC: | 26338 |
UniProt: | Q6ZMY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.24e-32 | 121 |
muscle precursor cell | 2.14e-24 | 58 |
myoblast | 2.14e-24 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-24 | 58 |
embryonic cell | 2.21e-24 | 250 |
muscle cell | 2.23e-23 | 55 |
smooth muscle cell | 1.38e-22 | 43 |
smooth muscle myoblast | 1.38e-22 | 43 |
electrically responsive cell | 4.52e-20 | 61 |
electrically active cell | 4.52e-20 | 61 |
vascular associated smooth muscle cell | 6.17e-20 | 32 |
fibroblast | 2.40e-19 | 76 |
endothelial cell of vascular tree | 3.27e-11 | 24 |
endothelial cell | 5.34e-11 | 36 |
blood vessel endothelial cell | 6.32e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.32e-10 | 18 |
multi fate stem cell | 1.04e-09 | 427 |
skin fibroblast | 1.97e-09 | 23 |
lining cell | 2.10e-09 | 58 |
barrier cell | 2.10e-09 | 58 |
somatic stem cell | 2.67e-09 | 433 |
meso-epithelial cell | 4.93e-09 | 45 |
stem cell | 1.37e-08 | 441 |
aortic smooth muscle cell | 3.18e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.98e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.