FFCP PHASE1:Hg19::chr7:116660063..116660067,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.74e-12;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.74e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-55!57;UBERON:0005068!1.06e-55!57;UBERON:0006241!1.06e-55!57;UBERON:0007135!1.06e-55!57;UBERON:0002616!1.35e-53!59;UBERON:0000955!4.51e-51!69;UBERON:0006238!4.51e-51!69;UBERON:0005743!2.07e-48!86;UBERON:0001017!4.33e-48!82;UBERON:0002020!1.43e-46!34;UBERON:0003528!1.43e-46!34;UBERON:0001893!1.77e-46!34;UBERON:0001869!4.44e-45!32;UBERON:0002791!2.03e-43!33;UBERON:0000073!3.80e-43!94;UBERON:0001016!3.80e-43!94;UBERON:0003075!1.20e-42!86;UBERON:0007284!1.20e-42!86;UBERON:0002780!1.00e-41!41;UBERON:0001890!1.00e-41!41;UBERON:0006240!1.00e-41!41;UBERON:0001950!1.12e-40!20;UBERON:0003080!1.26e-40!42;UBERON:0002346!2.01e-40!90;UBERON:0002619!8.02e-37!22;UBERON:0000956!3.76e-32!25;UBERON:0000203!3.76e-32!25;UBERON:0000033!1.92e-31!123;UBERON:0007023!7.04e-30!115;UBERON:0000153!1.26e-29!129;UBERON:0007811!1.26e-29!129;UBERON:0003056!5.03e-29!61;UBERON:0004121!3.53e-22!169;UBERON:0000924!1.75e-21!173;UBERON:0006601!1.75e-21!173;UBERON:0001872!5.60e-21!5;UBERON:0004733!7.11e-20!12;UBERON:0002028!7.11e-20!12;UBERON:0007277!7.11e-20!12;UBERON:0004732!3.02e-18!13;UBERON:0000369!3.99e-17!4;UBERON:0002435!3.99e-17!4;UBERON:0000204!3.99e-17!4;UBERON:0010082!3.99e-17!4;UBERON:0000200!2.28e-16!6;UBERON:0002308!7.68e-16!9;UBERON:0000125!7.68e-16!9;UBERON:0003076!1.22e-15!15;UBERON:0003057!1.22e-15!15;UBERON:0002680!1.51e-15!9;UBERON:0001895!1.51e-15!9;UBERON:0010092!1.51e-15!9;UBERON:0000025!1.11e-14!194;UBERON:0005383!3.25e-13!3;UBERON:0005382!3.25e-13!3;UBERON:0000988!1.45e-12!3;UBERON:0002771!2.52e-12!3;UBERON:0001871!3.43e-12!7;UBERON:0002298!4.91e-12!8;UBERON:0004111!3.14e-11!241;UBERON:0000064!3.50e-11!219;UBERON:0000119!6.62e-10!312;UBERON:0009663!8.28e-10!7;UBERON:0001873!1.82e-09!2;UBERON:0010122!1.82e-09!2;UBERON:0000483!2.94e-09!309;UBERON:0000477!5.00e-09!286;UBERON:0000481!1.00e-08!347;UBERON:0002148!1.08e-08!2;UBERON:0009662!1.08e-08!2;UBERON:0002021!4.09e-08!5;UBERON:0000475!6.98e-08!365;UBERON:0002420!1.25e-07!9;UBERON:0007245!1.25e-07!9;UBERON:0010009!1.25e-07!9;UBERON:0010011!1.25e-07!9;UBERON:0000454!1.25e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.06e-55!57;UBERON:0005068!1.06e-55!57;UBERON:0006241!1.06e-55!57;UBERON:0007135!1.06e-55!57;UBERON:0002616!1.35e-53!59;UBERON:0000955!4.51e-51!69;UBERON:0006238!4.51e-51!69;UBERON:0005743!2.07e-48!86;UBERON:0001017!4.33e-48!82;UBERON:0002020!1.43e-46!34;UBERON:0003528!1.43e-46!34;UBERON:0001893!1.77e-46!34;UBERON:0001869!4.44e-45!32;UBERON:0002791!2.03e-43!33;UBERON:0000073!3.80e-43!94;UBERON:0001016!3.80e-43!94;UBERON:0003075!1.20e-42!86;UBERON:0007284!1.20e-42!86;UBERON:0002780!1.00e-41!41;UBERON:0001890!1.00e-41!41;UBERON:0006240!1.00e-41!41;UBERON:0001950!1.12e-40!20;UBERON:0003080!1.26e-40!42;UBERON:0002346!2.01e-40!90;UBERON:0002619!8.02e-37!22;UBERON:0000956!3.76e-32!25;UBERON:0000203!3.76e-32!25;UBERON:0000033!1.92e-31!123;UBERON:0007023!7.04e-30!115;UBERON:0000153!1.26e-29!129;UBERON:0007811!1.26e-29!129;UBERON:0003056!5.03e-29!61;UBERON:0004121!3.53e-22!169;UBERON:0000924!1.75e-21!173;UBERON:0006601!1.75e-21!173;UBERON:0001872!5.60e-21!5;UBERON:0004733!7.11e-20!12;UBERON:0002028!7.11e-20!12;UBERON:0007277!7.11e-20!12;UBERON:0004732!3.02e-18!13;UBERON:0000369!3.99e-17!4;UBERON:0002435!3.99e-17!4;UBERON:0000204!3.99e-17!4;UBERON:0010082!3.99e-17!4;UBERON:0000200!2.28e-16!6;UBERON:0002308!7.68e-16!9;UBERON:0000125!7.68e-16!9;UBERON:0003076!1.22e-15!15;UBERON:0003057!1.22e-15!15;UBERON:0002680!1.51e-15!9;UBERON:0001895!1.51e-15!9;UBERON:0010092!1.51e-15!9;UBERON:0000025!1.11e-14!194;UBERON:0005383!3.25e-13!3;UBERON:0005382!3.25e-13!3;UBERON:0000988!1.45e-12!3;UBERON:0002771!2.52e-12!3;UBERON:0001871!3.43e-12!7;UBERON:0002298!4.91e-12!8;UBERON:0004111!3.14e-11!241;UBERON:0000064!3.50e-11!219;UBERON:0000119!6.62e-10!312;UBERON:0009663!8.28e-10!7;UBERON:0001873!1.82e-09!2;UBERON:0010122!1.82e-09!2;UBERON:0000483!2.94e-09!309;UBERON:0000477!5.00e-09!286;UBERON:0000481!1.00e-08!347;UBERON:0002148!1.08e-08!2;UBERON:0009662!1.08e-08!2;UBERON:0002021!4.09e-08!5;UBERON:0000475!6.98e-08!365;UBERON:0002420!1.25e-07!9;UBERON:0007245!1.25e-07!9;UBERON:0010009!1.25e-07!9;UBERON:0010011!1.25e-07!9;UBERON:0000454!1.25e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.66e-16;49!UBERON:0001950;5.80e-15;20!UBERON:0002619;9.85e-14;22!UBERON:0002114;2.74e-12;2!UBERON:0000956;3.07e-12;25!UBERON:0000203;3.07e-12;25!UBERON:0000955;1.03e-09;68!UBERON:0002791;2.51e-09;32!UBERON:0001869;4.10e-09;32!UBERON:0001016;4.47e-09;83!UBERON:0003528;8.65e-09;34!UBERON:0002020;8.65e-09;34!UBERON:0002021;5.54e-08;5!UBERON:0002108;6.78e-08;4!UBERON:0001872;6.78e-08;5!UBERON:0001893;1.65e-07;34!UBERON:0000073;1.71e-07;53!UBERON:0002616;1.71e-07;53!UBERON:0002780;2.09e-07;41!UBERON:0001890;2.09e-07;41!UBERON:0002037;8.72e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000922;4.66e-16;49!UBERON:0001950;5.80e-15;20!UBERON:0002619;9.85e-14;22!UBERON:0002114;2.74e-12;2!UBERON:0000956;3.07e-12;25!UBERON:0000203;3.07e-12;25!UBERON:0000955;1.03e-09;68!UBERON:0002791;2.51e-09;32!UBERON:0001869;4.10e-09;32!UBERON:0001016;4.47e-09;83!UBERON:0003528;8.65e-09;34!UBERON:0002020;8.65e-09;34!UBERON:0002021;5.54e-08;5!UBERON:0002108;6.78e-08;4!UBERON:0001872;6.78e-08;5!UBERON:0001893;1.65e-07;34!UBERON:0000073;1.71e-07;53!UBERON:0002616;1.71e-07;53!UBERON:0002780;2.09e-07;41!UBERON:0001890;2.09e-07;41!UBERON:0002037;8.72e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.66e-15,20;UBERON:0002619,9.64e-14,22;UBERON:0000955,2.81e-12,68;UBERON:0006238,2.81e-12,68;UBERON:0000956,3.01e-12,25;UBERON:0000203,3.01e-12,25;UBERON:0002114,3.24e-12,2;UBERON:0001017,2.00e-10,81;UBERON:0000073,2.23e-10,53;UBERON:0002616,2.23e-10,53;UBERON:0001049,7.34e-10,56;UBERON:0005068,7.34e-10,56;UBERON:0006241,7.34e-10,56;UBERON:0007135,7.34e-10,56;UBERON:0002791,8.26e-10,32;UBERON:0001869,8.26e-10,32;UBERON:0001016,1.91e-09,89;UBERON:0003528,2.73e-09,34;UBERON:0002020,2.73e-09,34;UBERON:0001893,2.73e-09,34;UBERON:0002021,5.35e-08,5;UBERON:0001872,6.55e-08,5;UBERON:0002780,7.40e-08,41;UBERON:0001890,7.40e-08,41;UBERON:0003080,7.40e-08,41;UBERON:0006240,7.40e-08,41;UBERON:0002108,7.49e-08,4;UBERON:0003075,6.33e-07,82;UBERON:0007284,6.33e-07,82;UBERON:0002037,8.97e-07,6;UBERON:0006215,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0.067401132980677,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91124334987037,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.706521476061055,0,0.319267718114302,0,2.26864526599546,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.570742291745161,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.394636641377094,0,0,0.078493092850514,0.314231179832004,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0.067401132980677,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91124334987037,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.706521476061055,0,0.319267718114302,0,2.26864526599546,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.206686796501184,0.570742291745161,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.394636641377094,0,0,0.078493092850514,0.314231179832004,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@ST7 | |short_description=p18@ST7 | ||
}} | }} |
Revision as of 22:35, 18 November 2012
Short description: | p18@ST7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_ST7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -170bp_to_ENST00000487459_5end |
EntrezGene: | ST7 |
HGNC: | 11351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 5.66e-15 | 20 |
regional part of cerebral cortex | 9.64e-14 | 22 |
brain | 2.81e-12 | 68 |
future brain | 2.81e-12 | 68 |
cerebral cortex | 3.01e-12 | 25 |
pallium | 3.01e-12 | 25 |
duodenum | 3.24e-12 | 2 |
central nervous system | 2.00e-10 | 81 |
regional part of nervous system | 2.23e-10 | 53 |
regional part of brain | 2.23e-10 | 53 |
neural tube | 7.34e-10 | 56 |
neural rod | 7.34e-10 | 56 |
future spinal cord | 7.34e-10 | 56 |
neural keel | 7.34e-10 | 56 |
regional part of telencephalon | 8.26e-10 | 32 |
cerebral hemisphere | 8.26e-10 | 32 |
nervous system | 1.91e-09 | 89 |
brain grey matter | 2.73e-09 | 34 |
gray matter | 2.73e-09 | 34 |
telencephalon | 2.73e-09 | 34 |
occipital lobe | 5.35e-08 | 5 |
parietal lobe | 6.55e-08 | 5 |
regional part of forebrain | 7.40e-08 | 41 |
forebrain | 7.40e-08 | 41 |
anterior neural tube | 7.40e-08 | 41 |
future forebrain | 7.40e-08 | 41 |
small intestine | 7.49e-08 | 4 |
neural plate | 6.33e-07 | 82 |
presumptive neural plate | 6.33e-07 | 82 |
cerebellum | 8.97e-07 | 6 |
rhombic lip | 8.97e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.