FFCP PHASE1:Hg19::chr6:57086200..57086228,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.93e-23!180;CL:0000057!1.72e-18!75;CL:0000680!1.81e-11!57;CL:0000056!1.81e-11!57;CL:0000355!1.81e-11!57;CL:0002620!1.42e-10!23;CL:0000187!1.21e-09!54;CL:0000192!6.99e-09!42;CL:0000514!6.99e-09!42;CL:0000183!1.03e-08!59;CL:0000048!4.41e-08!430;CL:0000393!9.10e-08!60;CL:0000211!9.10e-08!60;CL:0000723!1.57e-07!436;CL:0000034!7.78e-07!444 | |ontology_enrichment_celltype=CL:0000055!6.93e-23!180;CL:0000057!1.72e-18!75;CL:0000680!1.81e-11!57;CL:0000056!1.81e-11!57;CL:0000355!1.81e-11!57;CL:0002620!1.42e-10!23;CL:0000187!1.21e-09!54;CL:0000192!6.99e-09!42;CL:0000514!6.99e-09!42;CL:0000183!1.03e-08!59;CL:0000048!4.41e-08!430;CL:0000393!9.10e-08!60;CL:0000211!9.10e-08!60;CL:0000723!1.57e-07!436;CL:0000034!7.78e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.56e-20;23!CL:0000499;6.08e-10;28!CL:0000135;3.26e-09;3!CL:0000388;3.26e-09;3!CL:0002579;9.00e-09;3!CL:0002622;9.00e-09;3!CL:0000153;6.49e-08;9!CL:0000447;6.49e-08;9!CL:0000057;3.72e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;5.56e-20;23!CL:0000499;6.08e-10;28!CL:0000135;3.26e-09;3!CL:0000388;3.26e-09;3!CL:0002579;9.00e-09;3!CL:0002622;9.00e-09;3!CL:0000153;6.49e-08;9!CL:0000447;6.49e-08;9!CL:0000057;3.72e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.09e-20,23;CL:0000057,2.08e-19,76;CL:0000499,5.82e-10,28;CL:0000135,3.77e-09,3;CL:0000388,3.77e-09,3;CL:0002622,1.05e-08,3;CL:0002579,1.31e-08,3;CL:0000153,5.17e-08,9;CL:0000447,5.17e-08,9;CL:0000048,2.91e-07,427;CL:0000134,5.09e-07,354;CL:0000723,5.45e-07,433 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.66e-13;5!DOID:450;2.66e-13;5!DOID:66;2.66e-13;5!DOID:423;2.66e-13;5!DOID:0080000;2.66e-13;5!DOID:11722;2.66e-13;5!DOID:0060084;3.08e-10;3!DOID:127;3.08e-10;3!DOID:0060072;9.40e-08;4 | |ontology_enrichment_disease_v019=DOID:17;2.66e-13;5!DOID:450;2.66e-13;5!DOID:66;2.66e-13;5!DOID:423;2.66e-13;5!DOID:0080000;2.66e-13;5!DOID:11722;2.66e-13;5!DOID:0060084;3.08e-10;3!DOID:127;3.08e-10;3!DOID:0060072;9.40e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.76e-13,5;DOID:450,1.76e-13,5;DOID:66,1.76e-13,5;DOID:423,1.76e-13,5;DOID:0080000,1.76e-13,5;DOID:11722,1.76e-13,5;DOID:0060084,2.83e-10,3;DOID:127,2.83e-10,3;DOID:0060072,8.83e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.05e-14!83;UBERON:0002329!1.05e-14!83;UBERON:0003077!1.05e-14!83;UBERON:0003059!1.05e-14!83;UBERON:0007282!1.05e-14!83;UBERON:0009618!1.05e-14!83;UBERON:0007285!1.05e-14!83;UBERON:0002385!5.74e-11!63;UBERON:0001015!5.74e-11!63;UBERON:0000383!5.74e-11!63;UBERON:0005256!8.45e-11!143;UBERON:0001134!1.16e-10!61;UBERON:0002036!1.16e-10!61;UBERON:0003082!1.16e-10!61;UBERON:0004290!4.50e-10!70;UBERON:0003102!4.68e-10!95;UBERON:0000486!1.59e-08!82;UBERON:0002100!1.48e-07!216;UBERON:0002199!1.63e-07!45;UBERON:0002416!1.63e-07!45;UBERON:0002097!7.79e-07!40;UBERON:0000075!8.75e-07!13;UBERON:0005944!8.75e-07!13;UBERON:0004288!8.75e-07!13;UBERON:0003089!8.75e-07!13 | |ontology_enrichment_uberon=UBERON:0000914!1.05e-14!83;UBERON:0002329!1.05e-14!83;UBERON:0003077!1.05e-14!83;UBERON:0003059!1.05e-14!83;UBERON:0007282!1.05e-14!83;UBERON:0009618!1.05e-14!83;UBERON:0007285!1.05e-14!83;UBERON:0002385!5.74e-11!63;UBERON:0001015!5.74e-11!63;UBERON:0000383!5.74e-11!63;UBERON:0005256!8.45e-11!143;UBERON:0001134!1.16e-10!61;UBERON:0002036!1.16e-10!61;UBERON:0003082!1.16e-10!61;UBERON:0004290!4.50e-10!70;UBERON:0003102!4.68e-10!95;UBERON:0000486!1.59e-08!82;UBERON:0002100!1.48e-07!216;UBERON:0002199!1.63e-07!45;UBERON:0002416!1.63e-07!45;UBERON:0002097!7.79e-07!40;UBERON:0000075!8.75e-07!13;UBERON:0005944!8.75e-07!13;UBERON:0004288!8.75e-07!13;UBERON:0003089!8.75e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.18e-10;41!UBERON:0002199;1.41e-09;46!UBERON:0002416;1.41e-09;46!UBERON:0007846;3.26e-09;3!UBERON:0000043;3.26e-09;3!UBERON:0007845;3.26e-09;3!UBERON:0004457;1.24e-07;9!UBERON:0000042;1.24e-07;9!UBERON:0003102;6.66e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.18e-10;41!UBERON:0002199;1.41e-09;46!UBERON:0002416;1.41e-09;46!UBERON:0007846;3.26e-09;3!UBERON:0000043;3.26e-09;3!UBERON:0007845;3.26e-09;3!UBERON:0004457;1.24e-07;9!UBERON:0000042;1.24e-07;9!UBERON:0003102;6.66e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.58e-14,99;UBERON:0002097,1.60e-13,41;UBERON:0002199,2.36e-13,46;UBERON:0002416,2.36e-13,46;UBERON:0007846,3.77e-09,3;UBERON:0000043,3.77e-09,3;UBERON:0007845,3.77e-09,3;UBERON:0004122,6.48e-08,15;UBERON:0002384,2.51e-07,371 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,5.42158728576849,1.50401373190767,2.462390822334,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.25326102332916,2.91300197789081,0.573673241497627,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.404132016209064,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0,0,0.516628905878827,2.37600571456411,1.48360157567134,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,3.0648779579902,3.75595147266492,0.567160915800105,1.4351170855109,1.70845911054854,2.54318281391474,1.50045548042201,1.23663035086127,1.54584324027377,2.79175284497385,5.06328996723799,6.9180273664451,1.51460264546469,1.38074847963449,0.80823028409406,1.77504796258307,1.71278566986988,1.3564847384839,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.258543431515556,0,0,6.91439103120663,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0,5.22920075160176,0.099972991182057,0,0,0,2.15662369942424,0,0,7.38384664004654,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,0.356857977594324,0.157702415033935,0.35142424497814,0.902838299183157,0,0,1.99267679560631,0.553107505625109,0.868836144680828,0,0,0,0,0,0,0,0,1.98486246255021,1.07423381301644,0.561320188866147,1.28139149255701,2.04682899626681,1.28683136914886,0,0,0.177561725313127,0.410635780069046,0,0.116210378459959,0.120859449591622,0,0,1.14814448164607,1.45672934405374,2.49136388422906,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0.929691098594572,0.31481234683064,0,0.308033580176089,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0.949138274156178,0.190630193923825,0.511795582622668,0,0.318203247925937,0,1.07923474549989,1.64722217841633,0.824686816419805,0,4.75530963519025,0,0,0.243713489631284,1.05650146756755,1.09199929126389,1.27264888758341,0,0.551365343546124,0,0.876901770507525,0,0,0.405820753925408,0,0,0.573645408816206,0.491245205065606,0.35667105148125,0.709522128141196,2.9555068941673,3.95153871551882,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,9.95326680517784,0,0,0,3.25523238601881,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0.10893846351899,0,0.692552326534174,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,1.18608451472249,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,6.1914971689782,0,0,0,0.484945082442097,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,5.42999601753713,19.8770942976292,5.87857248196936,0,0,11.5863854814087,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0.554805861502613,3.03044808440143,7.29546915082468,6.22867855117575,0,0.151230923763239,0,0.147855149989634,0.796483835818512,0,0.310525913752519,0,0.265841714557995,1.04349012362347,0.300515217994437,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0.796191777397232,0.400027764663154,3.77735275701072,2.35724642136143,6.30924491143255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0,1.05802783107205,1.2249819094128,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0.762764190934334,0,2.3869946653953,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.354809480650555,0,0.342976018874837,0,0,0,0,0.863424021355654,0,0.280272163313789,0,0,0,0,0,0,0,2.40513409419076,0,0.17071847709395,0.691259661814092,0,0,0,0.42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| ||
|short_description=p3@RAB23 | |short_description=p3@RAB23 | ||
}} | }} |
Revision as of 05:01, 18 November 2012
Short description: | p3@RAB23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAB23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468148_5end |
EntrezGene: | RAB23 |
HGNC: | 14263 |
UniProt: | Q9ULC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.09e-20 | 23 |
fibroblast | 2.08e-19 | 76 |
stromal cell | 5.82e-10 | 28 |
fibrocyte | 3.77e-09 | 3 |
tendon cell | 3.77e-09 | 3 |
prostate stromal cell | 1.05e-08 | 3 |
omentum preadipocyte | 1.31e-08 | 3 |
GAG secreting cell | 5.17e-08 | 9 |
carbohydrate secreting cell | 5.17e-08 | 9 |
multi fate stem cell | 2.91e-07 | 427 |
mesenchymal cell | 5.09e-07 | 354 |
somatic stem cell | 5.45e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.58e-14 | 99 |
skin of body | 1.60e-13 | 41 |
integument | 2.36e-13 | 46 |
integumental system | 2.36e-13 | 46 |
dense regular connective tissue | 3.77e-09 | 3 |
tendon | 3.77e-09 | 3 |
regular connective tissue | 3.77e-09 | 3 |
genitourinary system | 6.48e-08 | 15 |
connective tissue | 2.51e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.76e-13 | 5 |
myotonic disease | 1.76e-13 | 5 |
muscle tissue disease | 1.76e-13 | 5 |
myopathy | 1.76e-13 | 5 |
muscular disease | 1.76e-13 | 5 |
myotonic dystrophy | 1.76e-13 | 5 |
cell type benign neoplasm | 2.83e-10 | 3 |
leiomyoma | 2.83e-10 | 3 |
benign neoplasm | 8.83e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.