FFCP PHASE1:Hg19::chr1:120354079..120354091,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002563!4.35e-07!4 | |ontology_enrichment_celltype=CL:0002563!4.35e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.40e-10;4 | |ontology_enrichment_celltype_v019=CL:0002563;1.40e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.40e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.57e-13;3!UBERON:0003353;2.57e-13;3!UBERON:0006242;3.08e-11;1!UBERON:0001045;7.46e-11;1!UBERON:0009143;1.46e-10;1 | |ontology_enrichment_development_v019=UBERON:0009847;2.57e-13;3!UBERON:0003353;2.57e-13;3!UBERON:0006242;3.08e-11;1!UBERON:0001045;7.46e-11;1!UBERON:0009143;1.46e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@REG4 | |short_description=p1@REG4 | ||
}} | }} |
Revision as of 04:38, 18 November 2012
Short description: | p1@REG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_REG4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 111bp_to_ENST00000354219, ENST00000369401, ENST00000369402, NM_001159352, NM_001159353, NM_032044, uc001eif.2, uc001eig.2, uc001eih.1_5end |
EntrezGene: | REG4 |
HGNC: | 22977 |
UniProt: | Q9BYZ8Q5T3X5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.40e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.67e-52 | 17 |
gastrointestinal system | 4.78e-51 | 25 |
large intestine | 8.75e-31 | 11 |
colon | 1.39e-26 | 9 |
small intestine | 2.21e-18 | 4 |
subdivision of digestive tract | 6.35e-18 | 118 |
lower digestive tract | 1.18e-17 | 5 |
hindgut | 2.28e-17 | 19 |
digestive system | 3.21e-16 | 145 |
digestive tract | 3.21e-16 | 145 |
primitive gut | 3.21e-16 | 145 |
endoderm-derived structure | 1.85e-14 | 160 |
endoderm | 1.85e-14 | 160 |
presumptive endoderm | 1.85e-14 | 160 |
vermiform appendix | 7.46e-11 | 1 |
caecum | 7.46e-11 | 1 |
midgut | 7.46e-11 | 1 |
organ system subdivision | 8.29e-11 | 223 |
intestinal mucosa | 1.40e-10 | 4 |
wall of intestine | 1.40e-10 | 4 |
gastrointestinal system mucosa | 1.40e-10 | 4 |
gastrointestinal system epithelium | 1.40e-10 | 4 |
intestinal epithelium | 1.40e-10 | 4 |
rectum | 1.95e-10 | 4 |
prostate gland | 3.49e-08 | 11 |
male accessory sex gland | 3.49e-08 | 11 |
embryonic cloacal epithelium | 3.49e-08 | 11 |
epithelium of hindgut | 3.49e-08 | 11 |
urogenital sinus epithelium | 3.49e-08 | 11 |
prostate bud | 3.49e-08 | 11 |
prostate field | 3.49e-08 | 11 |
sex gland | 1.53e-07 | 12 |
male reproductive gland | 1.53e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.