FFCP PHASE1:Hg19::chr3:55522502..55522553,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.17e-20!180;CL:0000057!7.14e-12!75;CL:0000680!2.33e-08!57;CL:0000056!2.33e-08!57;CL:0000355!2.33e-08!57;CL:0000187!2.30e-07!54;CL:0000183!4.61e-07!59;CL:0002620!4.83e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.17e-20!180;CL:0000057!7.14e-12!75;CL:0000680!2.33e-08!57;CL:0000056!2.33e-08!57;CL:0000355!2.33e-08!57;CL:0000187!2.30e-07!54;CL:0000183!4.61e-07!59;CL:0002620!4.83e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.62e-09;55!CL:0000723;3.20e-08;61!CL:0000048;8.26e-08;58!CL:0000349;2.95e-07;19!CL:0002620;3.24e-07;23 | |ontology_enrichment_celltype_v019=CL:0000134;3.62e-09;55!CL:0000723;3.20e-08;61!CL:0000048;8.26e-08;58!CL:0000349;2.95e-07;19!CL:0002620;3.24e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.27e-13,76;CL:0000680,2.64e-08,58;CL:0000056,2.64e-08,58;CL:0000355,2.64e-08,58;CL:0000349,2.45e-07,19;CL:0000187,2.79e-07,55;CL:0002620,2.87e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.97e-15!365;UBERON:0000468!5.61e-13!659;UBERON:0003102!1.50e-12!95;UBERON:0000914!4.76e-12!83;UBERON:0002329!4.76e-12!83;UBERON:0003077!4.76e-12!83;UBERON:0003059!4.76e-12!83;UBERON:0007282!4.76e-12!83;UBERON:0009618!4.76e-12!83;UBERON:0007285!4.76e-12!83;UBERON:0000481!1.79e-10!347;UBERON:0000486!2.55e-09!82;UBERON:0000467!3.11e-09!625;UBERON:0000480!3.89e-09!626;UBERON:0004290!1.10e-08!70;UBERON:0000922!1.45e-08!612;UBERON:0005256!2.16e-08!143;UBERON:0002050!4.38e-08!605;UBERON:0005423!4.38e-08!605;UBERON:0000923!8.62e-08!604;UBERON:0005291!8.62e-08!604;UBERON:0006598!8.62e-08!604;UBERON:0002532!8.62e-08!604;UBERON:0001134!1.09e-07!61;UBERON:0002036!1.09e-07!61;UBERON:0003082!1.09e-07!61;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63;UBERON:0000062!2.29e-07!511;UBERON:0002199!2.52e-07!45;UBERON:0002416!2.52e-07!45;UBERON:0001444!7.33e-07!48;UBERON:0000478!8.01e-07!24 | |ontology_enrichment_uberon=UBERON:0000475!5.97e-15!365;UBERON:0000468!5.61e-13!659;UBERON:0003102!1.50e-12!95;UBERON:0000914!4.76e-12!83;UBERON:0002329!4.76e-12!83;UBERON:0003077!4.76e-12!83;UBERON:0003059!4.76e-12!83;UBERON:0007282!4.76e-12!83;UBERON:0009618!4.76e-12!83;UBERON:0007285!4.76e-12!83;UBERON:0000481!1.79e-10!347;UBERON:0000486!2.55e-09!82;UBERON:0000467!3.11e-09!625;UBERON:0000480!3.89e-09!626;UBERON:0004290!1.10e-08!70;UBERON:0000922!1.45e-08!612;UBERON:0005256!2.16e-08!143;UBERON:0002050!4.38e-08!605;UBERON:0005423!4.38e-08!605;UBERON:0000923!8.62e-08!604;UBERON:0005291!8.62e-08!604;UBERON:0006598!8.62e-08!604;UBERON:0002532!8.62e-08!604;UBERON:0001134!1.09e-07!61;UBERON:0002036!1.09e-07!61;UBERON:0003082!1.09e-07!61;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63;UBERON:0000062!2.29e-07!511;UBERON:0002199!2.52e-07!45;UBERON:0002416!2.52e-07!45;UBERON:0001444!7.33e-07!48;UBERON:0000478!8.01e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.08e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.08e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.35e-14,99;UBERON:0000486,1.22e-09,83;UBERON:0007524,3.77e-09,73;UBERON:0002329,7.22e-09,71;UBERON:0003059,7.22e-09,71;UBERON:0007282,7.22e-09,71;UBERON:0004290,7.22e-09,71;UBERON:0009618,7.22e-09,71;UBERON:0003077,9.87e-09,72;UBERON:0007285,9.87e-09,72;UBERON:0002199,2.44e-08,46;UBERON:0002416,2.44e-08,46;UBERON:0000033,3.58e-08,56;UBERON:0000153,3.60e-08,62;UBERON:0007811,3.60e-08,62;UBERON:0007503,4.25e-08,78;UBERON:0001134,1.00e-07,62;UBERON:0002036,1.00e-07,62;UBERON:0003082,1.00e-07,62;UBERON:0002385,1.60e-07,64;UBERON:0001015,1.60e-07,64;UBERON:0000383,1.60e-07,64;UBERON:0000478,2.79e-07,24;UBERON:0001444,2.84e-07,49;UBERON:0002097,2.95e-07,41 | |||
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| ||
|short_description=p@chr3:55522502..55522553,- | |short_description=p@chr3:55522502..55522553,- | ||
}} | }} |
Revision as of 22:29, 15 November 2012
Short description: | p@chr3:55522502..55522553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:55522502..55522553, - |
Coexpression cluster: | C1080_Fibroblast_mesenchymal_neuroectodermal_Hair_Mesenchymal_Smooth_alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.27e-13 | 76 |
muscle precursor cell | 2.64e-08 | 58 |
myoblast | 2.64e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.64e-08 | 58 |
extraembryonic cell | 2.45e-07 | 19 |
muscle cell | 2.79e-07 | 55 |
skin fibroblast | 2.87e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.35e-14 | 99 |
multilaminar epithelium | 1.22e-09 | 83 |
dense mesenchyme tissue | 3.77e-09 | 73 |
somite | 7.22e-09 | 71 |
presomitic mesoderm | 7.22e-09 | 71 |
presumptive segmental plate | 7.22e-09 | 71 |
dermomyotome | 7.22e-09 | 71 |
trunk paraxial mesoderm | 7.22e-09 | 71 |
paraxial mesoderm | 9.87e-09 | 72 |
presumptive paraxial mesoderm | 9.87e-09 | 72 |
integument | 2.44e-08 | 46 |
integumental system | 2.44e-08 | 46 |
head | 3.58e-08 | 56 |
anterior region of body | 3.60e-08 | 62 |
craniocervical region | 3.60e-08 | 62 |
epithelial vesicle | 4.25e-08 | 78 |
skeletal muscle tissue | 1.00e-07 | 62 |
striated muscle tissue | 1.00e-07 | 62 |
myotome | 1.00e-07 | 62 |
muscle tissue | 1.60e-07 | 64 |
musculature | 1.60e-07 | 64 |
musculature of body | 1.60e-07 | 64 |
extraembryonic structure | 2.79e-07 | 24 |
subdivision of head | 2.84e-07 | 49 |
skin of body | 2.95e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.