FFCP PHASE1:Hg19::chr12:52639223..52639262,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.12e-45!254;CL:0000076!2.57e-14!62;CL:0000063!1.31e-11!578;CL:0002076!1.37e-10!43;CL:0000077!4.67e-10!19;CL:0002368!8.41e-09!13;CL:0000548!7.62e-07!679;CL:0000004!7.62e-07!679;CL:0000255!7.62e-07!679 | |ontology_enrichment_celltype=CL:0000066!1.12e-45!254;CL:0000076!2.57e-14!62;CL:0000063!1.31e-11!578;CL:0002076!1.37e-10!43;CL:0000077!4.67e-10!19;CL:0002368!8.41e-09!13;CL:0000548!7.62e-07!679;CL:0000004!7.62e-07!679;CL:0000255!7.62e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000077;5.06e-18;19!CL:0002368;6.70e-09;13!CL:0002076;1.15e-07;42!CL:0000076;1.22e-07;63 | |ontology_enrichment_celltype_v019=CL:0000077;5.06e-18;19!CL:0002368;6.70e-09;13!CL:0002076;1.15e-07;42!CL:0000076;1.22e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.30e-42,253;CL:0000077,4.91e-18,19;CL:0000076,5.85e-14,63;CL:0002076,8.02e-11,42;CL:0002368,4.04e-09,13;CL:0000213,9.50e-08,58;CL:0000215,9.50e-08,58;CL:0000223,4.11e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.18e-09;29 | |ontology_enrichment_development_v019=UBERON:0008947;4.18e-09;29 | ||
|ontology_enrichment_disease=DOID:305!2.48e-14!106;DOID:0050687!1.54e-09!143 | |ontology_enrichment_disease=DOID:305!2.48e-14!106;DOID:0050687!1.54e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.49e-13,106;DOID:0050687,9.09e-10,143;DOID:162,1.79e-07,235;DOID:14566,4.78e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.02e-14!169;UBERON:0000925!9.02e-14!169;UBERON:0006595!9.02e-14!169;UBERON:0000065!1.04e-13!53;UBERON:0001004!2.46e-12!72;UBERON:0008947!5.44e-12!38;UBERON:0003258!5.44e-12!38;UBERON:0000077!3.68e-11!130;UBERON:0000072!4.14e-11!46;UBERON:0000464!1.29e-10!104;UBERON:0001048!1.88e-09!168;UBERON:0001041!2.79e-09!98;UBERON:0001007!5.86e-09!155;UBERON:0001555!5.86e-09!155;UBERON:0007026!5.86e-09!155;UBERON:0000466!8.24e-09!126;UBERON:0001737!8.71e-09!9;UBERON:0005631!1.65e-08!14;UBERON:0000158!1.65e-08!14;UBERON:0005153!2.03e-08!37;UBERON:0005911!2.24e-08!82;UBERON:0004921!5.94e-08!129;UBERON:0004185!5.94e-08!129;UBERON:0003124!2.02e-07!7;UBERON:0006554!2.26e-07!44;UBERON:0000063!3.46e-07!97;UBERON:0001557!3.95e-07!19;UBERON:0001008!5.01e-07!45 | |ontology_enrichment_uberon=UBERON:0004119!9.02e-14!169;UBERON:0000925!9.02e-14!169;UBERON:0006595!9.02e-14!169;UBERON:0000065!1.04e-13!53;UBERON:0001004!2.46e-12!72;UBERON:0008947!5.44e-12!38;UBERON:0003258!5.44e-12!38;UBERON:0000077!3.68e-11!130;UBERON:0000072!4.14e-11!46;UBERON:0000464!1.29e-10!104;UBERON:0001048!1.88e-09!168;UBERON:0001041!2.79e-09!98;UBERON:0001007!5.86e-09!155;UBERON:0001555!5.86e-09!155;UBERON:0007026!5.86e-09!155;UBERON:0000466!8.24e-09!126;UBERON:0001737!8.71e-09!9;UBERON:0005631!1.65e-08!14;UBERON:0000158!1.65e-08!14;UBERON:0005153!2.03e-08!37;UBERON:0005911!2.24e-08!82;UBERON:0004921!5.94e-08!129;UBERON:0004185!5.94e-08!129;UBERON:0003124!2.02e-07!7;UBERON:0006554!2.26e-07!44;UBERON:0000063!3.46e-07!97;UBERON:0001557!3.95e-07!19;UBERON:0001008!5.01e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.22e-14;9!UBERON:0001557;3.22e-14;9!UBERON:0000065;1.05e-10;44!UBERON:0000072;5.58e-10;37!UBERON:0001004;6.74e-07;65!UBERON:0001987;9.73e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001737;3.22e-14;9!UBERON:0001557;3.22e-14;9!UBERON:0000065;1.05e-10;44!UBERON:0000072;5.58e-10;37!UBERON:0001004;6.74e-07;65!UBERON:0001987;9.73e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.11e-14,9;UBERON:0004119,4.12e-12,160;UBERON:0000925,4.12e-12,160;UBERON:0006595,4.12e-12,160;UBERON:0003124,7.60e-12,7;UBERON:0000065,4.02e-11,54;UBERON:0005631,6.69e-11,14;UBERON:0000158,6.69e-11,14;UBERON:0008947,6.72e-11,38;UBERON:0003258,6.72e-11,38;UBERON:0001004,1.79e-10,74;UBERON:0000072,5.41e-09,47;UBERON:0001041,5.55e-08,87;UBERON:0001048,6.61e-08,160;UBERON:0001557,3.50e-07,19;UBERON:0001007,5.49e-07,145;UBERON:0001555,5.49e-07,145;UBERON:0007026,5.49e-07,145;UBERON:0001987,5.76e-07,4;UBERON:0004340,5.76e-07,4;UBERON:0006554,9.27e-07,47 | |||
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| ||
|short_description=p6@KRT7 | |short_description=p6@KRT7 | ||
}} | }} |
Revision as of 17:54, 15 November 2012
Short description: | p6@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KRT7_5end |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | 0bp_to_ENST00000548657_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.30e-42 | 253 |
mesothelial cell | 4.91e-18 | 19 |
squamous epithelial cell | 5.85e-14 | 63 |
endo-epithelial cell | 8.02e-11 | 42 |
respiratory epithelial cell | 4.04e-09 | 13 |
lining cell | 9.50e-08 | 58 |
barrier cell | 9.50e-08 | 58 |
endodermal cell | 4.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.11e-14 | 9 |
endoderm-derived structure | 4.12e-12 | 160 |
endoderm | 4.12e-12 | 160 |
presumptive endoderm | 4.12e-12 | 160 |
chorion | 7.60e-12 | 7 |
respiratory tract | 4.02e-11 | 54 |
extraembryonic membrane | 6.69e-11 | 14 |
membranous layer | 6.69e-11 | 14 |
respiratory primordium | 6.72e-11 | 38 |
endoderm of foregut | 6.72e-11 | 38 |
respiratory system | 1.79e-10 | 74 |
segment of respiratory tract | 5.41e-09 | 47 |
foregut | 5.55e-08 | 87 |
primordium | 6.61e-08 | 160 |
upper respiratory tract | 3.50e-07 | 19 |
digestive system | 5.49e-07 | 145 |
digestive tract | 5.49e-07 | 145 |
primitive gut | 5.49e-07 | 145 |
placenta | 5.76e-07 | 4 |
allantois | 5.76e-07 | 4 |
urinary system structure | 9.27e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.49e-13 | 106 |
cell type cancer | 9.09e-10 | 143 |
cancer | 1.79e-07 | 235 |
disease of cellular proliferation | 4.78e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.