FFCP PHASE1:Mm9::chr7:26472296..26472360,+: Difference between revisions
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|id=chr7:26472296..26472360,+ | |id=chr7:26472296..26472360,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.20e-15!32;CL:0002032!1.20e-15!32;CL:0000037!1.20e-15!32;CL:0000566!1.20e-15!32;CL:0000837!1.20e-15!32;CL:0002320!1.28e-14!46;CL:0000134!1.28e-14!46;CL:0002031!3.08e-13!25;CL:0000219!1.42e-10!54;CL:0000049!1.54e-10!19;CL:0000763!8.08e-09!16;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0000839!2.46e-07!13;CL:0000838!3.22e-07!12;CL:0000791!7.66e-07!9;CL:0000789!7.66e-07!9;CL:0002420!7.66e-07!9;CL:0002419!7.66e-07!9;CL:0000790!7.66e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.20e-15!32;CL:0002032!1.20e-15!32;CL:0000037!1.20e-15!32;CL:0000566!1.20e-15!32;CL:0000837!1.20e-15!32;CL:0002320!1.28e-14!46;CL:0000134!1.28e-14!46;CL:0002031!3.08e-13!25;CL:0000219!1.42e-10!54;CL:0000049!1.54e-10!19;CL:0000763!8.08e-09!16;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0000839!2.46e-07!13;CL:0000838!3.22e-07!12;CL:0000791!7.66e-07!9;CL:0000789!7.66e-07!9;CL:0002420!7.66e-07!9;CL:0002419!7.66e-07!9;CL:0000790!7.66e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.34e-16,32;CL:0002032,9.34e-16,32;CL:0000037,9.34e-16,32;CL:0000837,9.34e-16,32;CL:0002320,4.04e-15,46;CL:0000134,4.04e-15,46;CL:0002031,2.50e-13,25;CL:0000219,3.43e-11,54;CL:0000049,1.31e-10,19;CL:0000763,7.10e-09,16;CL:0000738,2.93e-08,17;CL:0002087,2.93e-08,17;CL:0000839,2.21e-07,13;CL:0000838,2.90e-07,12;CL:0000791,6.96e-07,9;CL:0000789,6.96e-07,9;CL:0002420,6.96e-07,9;CL:0002419,6.96e-07,9;CL:0000790,6.96e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.90e-17!88;UBERON:0002390!7.76e-16!45;UBERON:0003061!7.76e-16!45;UBERON:0002384!1.28e-14!46;UBERON:0002193!1.68e-14!48;UBERON:0002405!2.34e-14!70;UBERON:0000926!1.73e-12!193;UBERON:0004120!1.73e-12!193;UBERON:0006603!1.73e-12!193;UBERON:0002371!3.53e-09!16;UBERON:0001474!7.98e-09!22;UBERON:0004765!7.98e-09!22;UBERON:0001434!7.98e-09!22;UBERON:0005057!4.63e-08!51;UBERON:0004177!4.91e-08!29 | |ontology_enrichment_uberon=UBERON:0003081!2.90e-17!88;UBERON:0002390!7.76e-16!45;UBERON:0003061!7.76e-16!45;UBERON:0002384!1.28e-14!46;UBERON:0002193!1.68e-14!48;UBERON:0002405!2.34e-14!70;UBERON:0000926!1.73e-12!193;UBERON:0004120!1.73e-12!193;UBERON:0006603!1.73e-12!193;UBERON:0002371!3.53e-09!16;UBERON:0001474!7.98e-09!22;UBERON:0004765!7.98e-09!22;UBERON:0001434!7.98e-09!22;UBERON:0005057!4.63e-08!51;UBERON:0004177!4.91e-08!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.49e-16,87;UBERON:0002390,6.01e-16,45;UBERON:0003061,6.01e-16,45;UBERON:0002384,4.04e-15,46;UBERON:0002193,1.44e-14,48;UBERON:0002405,1.44e-14,48;UBERON:0000926,3.60e-12,120;UBERON:0004120,3.60e-12,120;UBERON:0006603,3.60e-12,120;UBERON:0002371,3.08e-09,16;UBERON:0000077,7.44e-09,35;UBERON:0001474,8.03e-09,22;UBERON:0004765,8.03e-09,22;UBERON:0001434,8.03e-09,22;UBERON:0004177,4.37e-08,29;UBERON:0005057,4.37e-08,29;UBERON:0001041,1.48e-07,80 | |||
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| ||
|short_description=p2@Tgfb1 | |short_description=p2@Tgfb1 | ||
}} | }} |
Revision as of 21:57, 14 November 2012
Short description: | p2@Tgfb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tgfb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2223 |
Association with transcript: | 275bp_to_ENSMUST00000002678, NM_011577, uc009ftq.1_5end |
EntrezGene: | Tgfb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.34e-16 | 32 |
hematopoietic oligopotent progenitor cell | 9.34e-16 | 32 |
hematopoietic stem cell | 9.34e-16 | 32 |
hematopoietic multipotent progenitor cell | 9.34e-16 | 32 |
connective tissue cell | 4.04e-15 | 46 |
mesenchymal cell | 4.04e-15 | 46 |
hematopoietic lineage restricted progenitor cell | 2.50e-13 | 25 |
motile cell | 3.43e-11 | 54 |
common myeloid progenitor | 1.31e-10 | 19 |
myeloid cell | 7.10e-09 | 16 |
leukocyte | 2.93e-08 | 17 |
nongranular leukocyte | 2.93e-08 | 17 |
myeloid lineage restricted progenitor cell | 2.21e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.90e-07 | 12 |
mature alpha-beta T cell | 6.96e-07 | 9 |
alpha-beta T cell | 6.96e-07 | 9 |
immature T cell | 6.96e-07 | 9 |
mature T cell | 6.96e-07 | 9 |
immature alpha-beta T cell | 6.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.49e-16 | 87 |
hematopoietic system | 6.01e-16 | 45 |
blood island | 6.01e-16 | 45 |
connective tissue | 4.04e-15 | 46 |
hemolymphoid system | 1.44e-14 | 48 |
immune system | 1.44e-14 | 48 |
mesoderm | 3.60e-12 | 120 |
mesoderm-derived structure | 3.60e-12 | 120 |
presumptive mesoderm | 3.60e-12 | 120 |
bone marrow | 3.08e-09 | 16 |
mixed endoderm/mesoderm-derived structure | 7.44e-09 | 35 |
bone element | 8.03e-09 | 22 |
skeletal element | 8.03e-09 | 22 |
skeletal system | 8.03e-09 | 22 |
hemopoietic organ | 4.37e-08 | 29 |
immune organ | 4.37e-08 | 29 |
foregut | 1.48e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.